CX069924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069924 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.205e-17 Identity = 39/124 (31.45%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 2 SAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVAXXXXXXXXXXXXXAFVCHGLTLPTCLQ 373 +A Y MN EFS VL+ Q++++S++ D++ + ++ +++ +M+ NID V +RG+RLELL+DKT N+ ++ F+ +R + +N+KLT+ + +C G T P C++ Sbjct: 96 TALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIISVVFIYIIVSPLCGGFTWPNCVK 219
BLAST of CX069924 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 5.205e-17 Identity = 40/117 (34.19%), Postives = 71/117 (60.68%), Query Frame = 2 Query: 2 SAQAYGMNDEFSRVLSQQMEYYSDDPNA-DRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVAXXXXXXXXXXXXXAFVCHG 349 +A+A +N EF L + M+Y +D P +++++K ++++V+ VM+ENI+KVL+RG+++ELLVDKT N++ FR Q + + +W+ N+K+ + VCHG Sbjct: 100 TAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHG 216
BLAST of CX069924 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.160e-16 Identity = 42/117 (35.90%), Postives = 69/117 (58.97%), Query Frame = 2 Query: 2 SAQAYGMNDEFSRVLSQQMEYYSDDPNA-DRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVAXXXXXXXXXXXXXAFVCHG 349 +AQA +N EF L + M+Y D P+ ++ ++K ++S+V+ VM+ENI+KVL+RG+++ELLVDKT N++ FR + R +W +N+K+ + VCHG Sbjct: 100 TAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHG 216
BLAST of CX069924 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.514e-16 Identity = 39/95 (41.05%), Postives = 66/95 (69.47%), Query Frame = 2 Query: 2 SAQAYGMNDEFSRVLSQQMEYYSDDPNA-DRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKL 283 +AQA +N EF L + M+Y D P+ ++ ++K ++S+V+ VM+ENI+KVL+RG+++ELLVDKT N++ FR Q + R +W++N+K+ Sbjct: 100 TAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKI 194
BLAST of CX069924 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.755e-16 Identity = 38/95 (40.00%), Postives = 65/95 (68.42%), Query Frame = 2 Query: 2 SAQAYGMNDEFSRVLSQQMEYYSDDPNA-DRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKL 283 +AQA +N EF L + M+Y D P+ ++ ++K ++++V+ VM+ENI+KVL+RG+++ELLVDKT N++ FR Q + R +W+ N+K+ Sbjct: 165 TAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKI 259
BLAST of CX069924 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.085e-14 Identity = 36/117 (30.77%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 2 SAQAYGMNDEFSRVLSQQMEYYSDDPNA-DRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVAXXXXXXXXXXXXXAFVCHG 349 +A A +N EF V+ + M Y D +++ ++K ++S+V+++M+ENIDK ++RG+ L +L DKT N++ ++KQ + R +W++N+K+ + VCHG Sbjct: 101 TAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHG 217
BLAST of CX069924 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.158e-14 Identity = 32/92 (34.78%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 11 AYGMNDEFSRVLSQQMEYYSDDPNA-DRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKL 283 AY ++ EF +L + M+Y P +++++K ++++V+ +M++NI+KVL+RG+++ELLVDKT N+Q F++Q R+ R +W +++++ Sbjct: 122 AYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQM 213
BLAST of CX069924 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.047e-13 Identity = 30/89 (33.71%), Postives = 60/89 (67.42%), Query Frame = 2 Query: 26 DEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVA 292 D F RVL ++M+YYS+ P ++++N + ++S+ + + + I+K + RG+++E++VDKT +Q +F F+ + + +WW+N KL +A Sbjct: 106 DPFIRVLEERMKYYSN-PKSNKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQNKKLAIA 193 The following BLAST results are available for this feature:
BLAST of CX069924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069924 ID=CX069924; Name=CX069924; organism=Citrus sinensis; type=EST; length=648bpback to top |