CX069918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.139e-20 Identity = 54/156 (34.62%), Postives = 86/156 (55.13%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 782 KK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y D+ + ++L +K L + + S Sbjct: 47 KKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQS 201
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.139e-20 Identity = 54/156 (34.62%), Postives = 86/156 (55.13%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 782 KK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y D+ + ++L +K L + + S Sbjct: 47 KKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQS 201
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA2_CAEEL (Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.993e-20 Identity = 53/151 (35.10%), Postives = 78/151 (51.66%), Query Frame = -1 Query: 288 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQ-LYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELA 737 K+ +I H+ C +G+ D IL+ AR A Y Y E MP QLV + Q YTQ GG+RPFG S L AGWDKN G L+ DPSG Y WK ++ L++ + + + ++ + AL L ++ D + + +E+A Sbjct: 60 KVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALELDDGIHTALLTLRESFD-VGMNENNVEVA 209
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.035e-19 Identity = 50/152 (32.89%), Postives = 81/152 (53.29%), Query Frame = -1 Query: 327 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTM 782 KKVT K + T T +++I + CA+ G ++D+ + AR +A + Y Y MPV+ L + + D Q YTQ +RP G S + +D G +Y +DP+G + G+K S L++ YK ++S E+A+QLA+ LS + Sbjct: 54 KKVTEKNIVPETVTH-LFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVL 204
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.035e-19 Identity = 62/173 (35.84%), Postives = 89/173 (51.45%), Query Frame = -1 Query: 267 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQR-YTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPS 782 KK TS+L S EK+ I + +G+ D +L++ +R AQ Y Y E P + LVQ + Q TQ GG+RPFGVS L AG D+ G LY DPSG Y WK ++ L++ Y D++ ++AV A+ L +T + LT D +E+A V P+ Sbjct: 49 KKPTSELA-IGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEK-GPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALKETFEG-ELTEDNIEIAVVSTKPT 218
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.657e-19 Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = -1 Query: 324 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMD 782 K++ S L++ S S EK++K DDH+ A AG ++DA LI+ AR QAQ Y EP+ VE L + + D Q YTQ GG RPFGV+ + G N +L+ +DPSG WK + L++ Y + + +E V LAL L+ D Sbjct: 54 KRIRSPLMERS-SVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQYTQVGGARPFGVALIIGG-IVNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGMDLDEGVDLALAALASVND 204
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.657e-19 Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 782 KK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++ + VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y D+ + ++L +K L + + S Sbjct: 47 KKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQS 201
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.657e-19 Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 782 KK +KL Q + K+ +D++V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L++ Y D+ + ++L +K L + + S Sbjct: 47 KKSVAKL-QDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQS 201
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.657e-19 Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 782 KK +KL Q + K+ +D++V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L++ Y D+ + ++L +K L + + S Sbjct: 47 KKSVAKL-QDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQS 201
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.470e-19 Identity = 54/158 (34.18%), Postives = 90/158 (56.96%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWD-KNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDY---KDDISREEAVQLALKVLSKTMDS 782 ++ T KL T + K+ KID HV + +G+ +D+ ILI ARV+AQ + ++P+ VE L + + +Q YTQ GG+RPFGVS L AG+D ++ +LY ++PSG Y W + L+++Y + + EE V+L ++ L + + + Sbjct: 48 RRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQT 205 The following BLAST results are available for this feature:
BLAST of CX069918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069918 ID=CX069918; Name=CX069918; organism=Citrus sinensis; type=EST; length=782bpback to top |