CX069918

Overview
NameCX069918
Unique NameCX069918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12192 contig Csv1_Contig12192:278..1059. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.825e-23
Identity = 56/152 (36.84%), Postives = 85/152 (55.92%), Query Frame = -1
Query:  291 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLEL 746
            S  ++  I +H+    +G+  D  +L+  AR  AQ Y   Y+EP+PV QLVQ +    Q YTQ GG+RPFGVS L  GWD +  + LY SDPSG Y  WK           ++ L++ Y +D+  ++AV  A+  L +  +   +T+D +E+
Sbjct:   61 SVHRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPY-LYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTLKEGFEG-KMTADNIEI 210          
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.153e-22
Identity = 58/156 (37.18%), Postives = 89/156 (57.05%), Query Frame = -1
Query:  321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDD--ISREEAVQLALKVLSKTMDS 782
            KK  +KL Q   +  K+  +DDHV  A AG+ +DA ++IN ARV+ Q +    ++P+ VE + + +   KQ YTQ  G RPFG+S L  G+D +   +LY +DPSG Y  WK           +  L+++Y +D   S  EA++LA+K L + + S
Sbjct:   49 KKSVAKL-QDERTVRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEVVQS 203          
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.153e-22
Identity = 57/155 (36.77%), Postives = 92/155 (59.35%), Query Frame = -1
Query:  321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDS 782
            KK T KL Q S S  K+  +D+H+A A AG+ +DA +LIN AR++ Q +    ++P+ VE + + +   +Q YTQ GG+RPFG+S L  G+D       LY +DPSG +  WK           +  L+++YK+  + +E V+LA++ L + ++S
Sbjct:   48 KKSTPKL-QDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES-AGQETVKLAIRALLEVVES 200          
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.505e-22
Identity = 57/167 (34.13%), Postives = 98/167 (58.68%), Query Frame = -1
Query:  282 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 782
            K+ TSKL++   S EK+++ID+H+  A +G+++DA  +I  AR++AQ     Y EP+ VE L + +CD KQ YTQ GG+RPFG + +  G +   G +L+ +DPSG    +K               ++ Y DD++  +A++LAL  + +  +  + T + +E+A +
Sbjct:   53 KRPTSKLVEPK-SIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVN-GRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDMNLNQAIELALDAVYEATEGKT-TPESVEIAVI 216          
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.505e-22
Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = -1
Query:  339 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVL 782
            K+V SKLL+ S S EK++KID+H+  A +G++ DA  L++ ARV++Q    +Y E + VE L + LCD  Q YTQFGG RP+G + L AG      F+L+ +DPSG    +K             + +++Y  + S  +A+ L LK L
Sbjct:   53 KRVNSKLLEPS-SIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFGGARPYGTALLIAGISDGQ-FRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEYNPEASIRDAILLGLKAL 198          
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSJ (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica GN=Os08g0548900 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.505e-22
Identity = 59/155 (38.06%), Postives = 91/155 (58.71%), Query Frame = -1
Query:  321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK-NYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDS 782
            KK T KL Q S S  K+  +D H+A A AG+ +DA +LIN ARV+ Q +    ++P+ VE + + +   +Q YTQ GG+RPFG+S L  G+D       LY +DPSG +  WK           +  L+++YK D S +E ++LA++ L + ++S
Sbjct:   48 KKSTPKL-QDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-DTSGKETIKLAIRALLEVVES 200          
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.505e-22
Identity = 59/155 (38.06%), Postives = 91/155 (58.71%), Query Frame = -1
Query:  321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK-NYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDS 782
            KK T KL Q S S  K+  +D H+A A AG+ +DA +LIN ARV+ Q +    ++P+ VE + + +   +Q YTQ GG+RPFG+S L  G+D       LY +DPSG +  WK           +  L+++YK D S +E ++LA++ L + ++S
Sbjct:   48 KKSTPKL-QDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-DTSGKETIKLAIRALLEVVES 200          
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.966e-22
Identity = 53/177 (29.94%), Postives = 102/177 (57.63%), Query Frame = -1
Query:  252 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKY 782
            +K + + LQ S +T K+YK+D+H+  A AG+ +DA +++N A+++ QR+  +Y++ + V+ LV+ +   +Q  TQ  G RP+GVS +  G+++N   QL+ ++PSG    W               ++++Y+D ++R+  V  A+K L + ++S S      +  E+ ++  GK  Y
Sbjct:   46 EKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNENGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMTRDRCVHFAIKALLEAVESGS------KNIELLVLERGKAAY 216          
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.720e-22
Identity = 51/152 (33.55%), Postives = 90/152 (59.21%), Query Frame = -1
Query:  327 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTM 782
            K+  ++LL    S EK++ +DDHV C+ AG+ SD  ILI+ AR QA ++   Y EP+ ++ L + + D KQ YTQ GG+RPFGV+ +  G D+    +L M++PSG +  +                +++Y++D++ ++ + L ++ L+ T+
Sbjct:   54 KRKATQLLDVD-SIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYREDLNMQDTILLGIRALASTL 204          
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7_SCHPO (Probable proteasome subunit alpha type-7 OS=Schizosaccharomyces pombe GN=SPBC106.16 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.720e-22
Identity = 59/168 (35.12%), Postives = 97/168 (57.74%), Query Frame = -1
Query:  261 LQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGK 761
            LQ  ++ +K+  +D+HV  A AG+ +DA ILI+ ARV+AQ +     +P+ +E L + +   +Q YTQ GG+RPFGVS L AG+D      ++Y ++P+G Y  WK           +  L++++K+ +SR+E + LA   +S  ++     S  +ELA   +M  GK
Sbjct:   54 LQNVSNFQKIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDETIHLA---VSSLLEVVQTASGNIELA---IMDPGK 215          
The following BLAST results are available for this feature:
BLAST of CX069918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 161
Match NameE-valueIdentityDescription
PSA2_DROME8.825e-2336.84Proteasome subunit alpha type-2 OS=Drosophila mela... [more]
PSA7L_MACFA1.153e-2237.18Proteasome subunit alpha type-7-like OS=Macaca fas... [more]
PSA7A_ARATH1.153e-2236.77Proteasome subunit alpha type-7-A OS=Arabidopsis t... [more]
PSMA_METTH1.505e-2234.13Proteasome subunit alpha OS=Methanobacterium therm... [more]
PSMA_METPE1.505e-2239.19Proteasome subunit alpha OS=Methanosphaerula palus... [more]
PSA7A_ORYSJ1.505e-2238.06Proteasome subunit alpha type-7-A OS=Oryza sativa ... [more]
PSA7A_ORYSI1.505e-2238.06Proteasome subunit alpha type-7-A OS=Oryza sativa ... [more]
PSA7_TRYBB1.966e-2229.94Proteasome subunit alpha type-7 OS=Trypanosoma bru... [more]
PSMA_SULTO5.720e-2233.55Proteasome subunit alpha OS=Sulfolobus tokodaii GN... [more]
PSA7_SCHPO5.720e-2235.12Probable proteasome subunit alpha type-7 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F07-K13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069918 ID=CX069918; Name=CX069918; organism=Citrus sinensis; type=EST; length=782bp
TTTTTTTTTTTTTTTTGCATCCAACATCATAACATCTGAAATTACCAAGC
TTCTGATCATCAACATCAAACACATCGATCTGCAGTTCTTTGGGCAAAAA
GCATAAAAGTAATACAAGTACTGTCCAAATTGCTTTGAAATTAAGTTATA
ATGAAAGCATGGAAGATCTTCATTCAAGAAGTCTCAGCAGCAGGTTGGGT
TACTCCATGCTTCACCAACAACTTGCTCAGAGCTTCGGGTGAGCAAACTT
GGTACTTCACTTTGCCAGAAGGCATCAGGAAAACCTCAGCTAATTCAAGC
TTATCAGAAGTAAGACTGGTGCTGTCCATGGTTTTGCTGAGCACCTTCAG
TGCTAGTTGAACTGCTTCTTCCCTTGAAATATCATCCTTGTAATCTTGTT
TGAGGATTGATTGTGCAGCCTGGTTATTTGCACCAATAGCAGCAGCTTTC
CAACCACCATAGTTTCCACTAGGATCACTCATGTAAAGTTGGAAGCCATA
ATTTTTGTCCCACCCTGCAAAAAGAAATGAAACACCAAAGGGGCGGAGAC
CGCCAAACTGGGTGTAACCTTGCTTTGTATCACAAAGAGATTGAACAAGC
TGCTCAACAGGCATTGGCTCTTGGTAGGCATATGTGTAACGTTGGGCTTG
GACCCTGGCAGTGTTGATTAGGATGTTGGCATCAGACATTATTCCAGCTA
CGGCACAAGCAACATGATCATCAATCTTGTACATCTTCTCAGTGGAAGTT
GAGGTTTGCAGGAGCTTCGAAGTAACCTTCTT
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