CX069918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.839e-21 Identity = 55/167 (32.93%), Postives = 95/167 (56.89%), Query Frame = -1 Query: 282 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 782 KK+ S +L S +K+ + ++ +G+ D +L+ +R QA++Y Y+EP+PV QLV+ Q +TQ GG+RPFGVS L AG+D + G QLY DPSG+Y WK ++ L++ Y +D+ ++A+ A+ L + + ++S +E+ ++ Sbjct: 50 KKLPS-ILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEG-EISSKNIEIGKI 213
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.839e-21 Identity = 55/167 (32.93%), Postives = 95/167 (56.89%), Query Frame = -1 Query: 282 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 782 KK+ S +L S +K+ + ++ +G+ D +L+ +R QA++Y Y+EP+PV QLV+ Q +TQ GG+RPFGVS L AG+D + G QLY DPSG+Y WK ++ L++ Y +D+ ++A+ A+ L + + ++S +E+ ++ Sbjct: 50 KKLPS-ILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEG-EISSKNIEIGKI 213
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.708e-21 Identity = 64/167 (38.32%), Postives = 93/167 (55.69%), Query Frame = -1 Query: 282 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 782 K++ S L++ TS EK++K DDH+ A AG ++DA LI+ AR QAQ Y EP+ VE L +++ D Q YTQ GG RPFGV+ + G + +LY +DPSG W+ Q L++ Y + + E + LAL+ L+ D SLT + + LA V Sbjct: 54 KRIRSPLMER-TSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQYTQVGGARPFGVALIIGGIEDGEP-RLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESLDTEAGIGLALEALASVNDD-SLTPEGIGLATV 217
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.708e-21 Identity = 63/160 (39.38%), Postives = 92/160 (57.50%), Query Frame = -1 Query: 282 LQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 761 L TS EK++K DDHV A AG ++DA LI+ AR QAQ Y EP+ +E L +++ D Q YTQ GG RPFGV+ L G + +LY +DPSG WK Q L+++Y +++S +E V LAL+ ++ + D LT+ +++A V Sbjct: 60 LMEPTSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARPFGVALLIGGIEDG-SPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELSLDEGVGLALRTIAISNDD-ELTAAGVDVATV 217
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.842e-21 Identity = 66/195 (33.85%), Postives = 112/195 (57.44%), Query Frame = -1 Query: 216 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCD--TKQGYTQFGG----LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 782 K++TS LL+ S S +K+ +ID H+ CA++G+++DA +I+ AR++ Q + + Y EPM VE VQS+CD + G + G RPFGV+ L AG D+ G LY SDPSG + + Q+ L++ Y ++ E +LAL L + M+ ++T+ +ELA ++ K+++ + E L+ ++ Sbjct: 49 KRLTSPLLEPS-SIQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEK-GPSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYSKTLTIAECQKLALTTLKQVMEE-AITTTNVELA---VITKADQKFKIYNKEELATVI 237
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 6.324e-21 Identity = 58/162 (35.80%), Postives = 89/162 (54.94%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVA------GIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDD--ISREEAVQLALKVLSKTMDS 782 KK +KL Q + K+ +DDHV A A G+ +DA ++IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y +D S EA++LA+K L + + S Sbjct: 49 KKSVAKL-QDERTVRKICALDDHVCMAFAVLTIFIGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQS 209
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.079e-20 Identity = 55/156 (35.26%), Postives = 86/156 (55.13%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 782 KK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y DD + ++L +K L + + S Sbjct: 47 KKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQS 201
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.409e-20 Identity = 60/150 (40.00%), Postives = 86/150 (57.33%), Query Frame = -1 Query: 333 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSK 782 K+ S LL+ S S EK++KIDDHV A AG ++DA L++ AR Q+Q Y EP+ V L +S+ D Q YTQ GG RPFGV+ L AG + +L+ +DPSG WK Q L+ +Y +S ++ + LAL+ L++ Sbjct: 54 KQTRSPLLEGS-SVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVEGGEP-RLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNE 201
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.409e-20 Identity = 60/150 (40.00%), Postives = 86/150 (57.33%), Query Frame = -1 Query: 333 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSK 782 K+ S LL+ S S EK++KIDDHV A AG ++DA L++ AR Q+Q Y EP+ V L +S+ D Q YTQ GG RPFGV+ L AG + +L+ +DPSG WK Q L+ +Y +S ++ + LAL+ L++ Sbjct: 54 KQTRSPLLEGS-SVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVEGGEP-RLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNE 201
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA2_HALVO (Proteasome subunit alpha 2 OS=Halobacterium volcanii GN=psmA2 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.403e-20 Identity = 62/198 (31.31%), Postives = 100/198 (50.51%), Query Frame = -1 Query: 180 TSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAET 773 T L + S EK++K+DD + A AG ++DA L++ AR AQR Y EP+ VE L +++ D Q TQ GG RP+G S L G + G +L+ +DPSG WK Q+ L+ Y +D+S E+ + LA++ L +++E E+ L+ + Y++ E +++L + ET Sbjct: 55 TPSELMEAESIEKLHKLDDALGAATAGHVADARKLVDFARTTAQREHLRYGEPIGVETLTKTITDNIQESTQSGGTRPYGASLLIGGVENGSG-RLFATDPSGTPQEWKAVAIGGHREDVQAALEDGYAEDLSLEDGLALAVEAL-------VAADEEIESDELNLVTVSEAGYEIVDEETIAELFADATADDESDET 244 The following BLAST results are available for this feature:
BLAST of CX069918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069918 ID=CX069918; Name=CX069918; organism=Citrus sinensis; type=EST; length=782bpback to top |