CX069917
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 7.035e-32 Identity = 85/219 (38.81%), Postives = 127/219 (57.99%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG--------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 700 YD FSPEGRL+QVEYA+EAI +AIGI + +GV L EK++TS L++ S S EK+ +ID H+ CA++G+++DA LI+ ARV+ Q + + Y E M VE + Q++ + QFG RPFGV+ LF G D+ G QL+ DPSG + S L++ Y ++ +EA++ +L +L + M+ L + +ELA V Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA---LQFGEEDADPGAMSRPFGVALLFGGVDEK-GPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEE-KLNATNIELATV 220
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.035e-32 Identity = 85/219 (38.81%), Postives = 127/219 (57.99%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG--------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 700 YD FSPEGRL+QVEYA+EAI +AIGI + +GV L EK++TS L++ S S EK+ +ID H+ CA++G+++DA LI+ ARV+ Q + + Y E M VE + Q++ + QFG RPFGV+ LF G D+ G QL+ DPSG + S L++ Y ++ +EA++ +L +L + M+ L + +ELA V Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA---LQFGEEDADPGAMSRPFGVALLFGGVDEK-GPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEE-KLNATNIELATV 220
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA7_RAT (Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.188e-32 Identity = 77/206 (37.38%), Postives = 115/206 (55.83%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACA------VAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREE--AVQLALKVLSKTMDS 661 YD T+FSP+G L+QVEYA EA+ +A+G+ +D VVL EKK +KL Q + K+ +DD+V A V+G+ +DA I+IN ARV+ Q + +P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK L+++Y DD + ++L +K L + + S Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKL-QDERTVRKICALDDNVCMAFAVVASVSGLTADARIVINRARVECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQS 207
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.188e-32 Identity = 83/237 (35.02%), Postives = 128/237 (54.01%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREE--AVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVK 772 YD T+FSP+G L+QVEYA EA+ +A+G+ KD VVL EKK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ RPFG+S L G+D + +LY +DPSG Y WK +++Y D+ + ++L +K L + + S +ELA +M + + SPE + K + + Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLEVVQS---GGKNIELA---VMRRDQPLKILTSPEEIEKYVAE 232
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.188e-32 Identity = 83/221 (37.56%), Postives = 119/221 (53.85%), Query Frame = 2 Query: 56 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQ-RYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPS 715 M+ +Y T FSP G+L Q+EYA+ A+ +++GI + DGVVL EKK TS+ L S EK+ I + +G+ D +L++ +R AQ Y Y E P + LVQ + Q TQ GG+RPFGVS L AG D+ G LY DPSG Y WK + L++ Y D++ ++AV A+ L +T + LT D +E+A V P+ Sbjct: 1 MTDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSE-LAIGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEK-GPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALKETFEG-ELTEDNIEIAVVSTKPT 218
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.567e-31 Identity = 75/202 (37.13%), Postives = 119/202 (58.91%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWD-KNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDY---KDDISREEAVQLALKVLSKTMDS 661 YD +IFSP+G ++QVEYA+EA+ A+G+ K+ VVL E++ T KL T + K+ KID HV + +G+ +D+ ILI ARV+AQ + ++P+ VE L + + +Q YTQ GG+RPFGVS L AG+D ++ +LY ++PSG Y W L+++Y + + EE V+L ++ L + + + Sbjct: 4 YDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQT 205
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA2_CAEEL (Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.778e-31 Identity = 78/214 (36.45%), Postives = 110/214 (51.40%), Query Frame = 2 Query: 56 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQ-LYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELA 694 M Y T FSP G+L Q+EYA+ A+ N ++G+ +KDGVVL E V S L E++ K H+ C +G+ D IL+ AR A Y Y E MP QLV + Q YTQ GG+RPFG S L AGWDKN G L+ DPSG Y WK + L++ + + + ++ + AL L ++ D + + +E+A Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATEN-VGSVLTDDQPKVEQISK---HIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALELDDGIHTALLTLRESFD-VGMNENNVEVA 209
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA1_DICDI (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum GN=psmA1 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.327e-30 Identity = 73/205 (35.61%), Postives = 120/205 (58.54%), Query Frame = 2 Query: 65 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYK--DDISREEAVQLALKVLSKTMDSTSLT 673 +YDS T FSP GR++Q+EYAMEA+ G+A+ + SK VLV K+ +S+L + +K++ +DDHV A++G+ +DA +L N R + Y Y Y+ M VE+LV + D Q +TQ G RP+GV L AG+D+ G +Y + PSGN+ +K + L++ ++ ++ + E+ + L+ L +T+ +T T Sbjct: 5 QYDSDITTFSPSGRIHQIEYAMEAVKQGGAAVALKSKQFAVLVSLKRSSSEL---GSYQKKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHTQRYGRRPYGVGLLVAGYDQ-LGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFEECTLEQLITHGLRALRETIPNTDDT 205
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.733e-30 Identity = 72/200 (36.00%), Postives = 110/200 (55.00%), Query Frame = 2 Query: 59 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 655 S +D TIFSPEGRLYQVEYA +AI + + + S D V+ +KKVT K + T T +++I + CA+ G ++D+ + AR +A + Y Y MPV+ L + + D Q YTQ +RP G S + +D G +Y +DP+G + G+K S L++ YK ++S E+A+QLA+ LS + Sbjct: 6 SAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTH-LFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVL 204
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA5_ENTHI (Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.733e-30 Identity = 86/237 (36.29%), Postives = 132/237 (55.70%), Query Frame = 2 Query: 71 DSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG-----LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 766 D FS EGRL+QVEYA EA+ + IGI +K+GVVL EK+++S L+ S S EK+ +IDDH+ AV+G+ +DA LI+ AR++AQ + + Y EP+ VE + Q++ D + + RPFGV+ L AG D+ G +L+ +DPSG + + SIL + Y ++ EA LAL L + M+ L S +E+A L+ K K+++ + L+ Sbjct: 9 DHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGS-SIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDET-GPRLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKYNKSMTLREAEILALSTLKQVMEE-KLNSKNVEVA---LVTVEKKKFEIMDTAFIENLI 239 The following BLAST results are available for this feature:
BLAST of CX069917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069917 ID=CX069917; Name=CX069917; organism=Citrus sinensis; type=EST; length=854bpback to top |