CX069917
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.348e-41 Identity = 96/237 (40.51%), Postives = 144/237 (60.76%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKV--KYQVCSPEALSKLLVK 772 YD TIFSPEGRLYQVEYA EA+ +A+GI DGVVL ++++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ GG RPFG++ L G D+ + +L+ +DPSG +K +L+ Y +++ E ++LAL LSKT + L + +++A + SGK+ K V E + K + K Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKTTE--ELKPENIDMA--IVKDSGKLVEKISVDEIEKIVKAVYK 240
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.414e-40 Identity = 90/209 (43.06%), Postives = 131/209 (62.68%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM-DSTSLTSDKLEL 691 YD TIFSP+G LYQV+YA EA+ +AIGI SK VV+ EK+ LL S EK++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +L+M++PSG Y ++ L+++YK+D++ EE + LALK LS T+ + LT + +E+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVD-SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKALSATLKPNEKLTPNTVEI 216
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 7.018e-40 Identity = 88/233 (37.77%), Postives = 144/233 (61.80%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 766 YD T+FSP+GRL+QVEYA EA+ +A+G+ +GV+L+ +KK+ SKL++ + S EK+ IDD+VA +G+++DA +LI+ AR+ AQ+ Y + +E LV+ + D Q YTQ+GG+RP+GVS +FAG D+ G +L+ DP+G +K S L+++YK+ +S +EAV L +K L +++ ++L+ E+ + G KY++ E + K L Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQN-SLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQ-IGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASLEE----GEELKAPEIASITVGS-KYRIYGAEEVKKFL 233
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.667e-39 Identity = 90/244 (36.89%), Postives = 147/244 (60.25%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEA----LSKLLVKHGVTQ 787 YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ S EK+++ID+H+ A +G+++DA L++ ARV+AQ +Y EP+ VE + + +CD KQ YTQ+GG+RP+G + L AG D N +L+ +DPSG +K + + DY++D++ + A+ L + L K + + LE+ V L K++ PE + ++L KH T+ Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAE-SIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAAILLGMDALYKAAEG-KFDAGTLEVGVVSLEDK---KFRKLGPEEVENYVQQILEKHKGTE 244
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 4.549e-39 Identity = 86/233 (36.91%), Postives = 144/233 (61.80%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 766 YD T+FSP+GRL+QVEYA EA+ +A+G+ +GV+L+ +KKV S+L++ + S EK+ IDD+VA +G+++DA +L++ AR+ AQ+ Y + +E LV+ + D Q YTQ+GG+RP+GVS +FAG D+ G +L+ DP+G +K S L+++YK+++ +EAV L +K L +++ ++L+ E+ + G KY++ E + K L Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQN-SIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQ-IGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEE----GEELKAPEIASITVGN-KYRIYDQEEVKKFL 233
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.549e-39 Identity = 89/233 (38.20%), Postives = 141/233 (60.52%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 766 YD T+FSP+GRL+QVEYA EA+ +A+GI KDGV L+ EKKV S+L++ TS EK+ IDD VA +G+++DA +LI+ AR+ Q+ Y M +E LV+ + D Q YTQ+GG+RP+GVS +FAG D + G +L+ DP+G +K + L+++YK+++S +EA+++ + L + S ++ E+ + G+ + V + E +SK L Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVRSRLVE-KTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVRPYGVSIIFAGLD-SIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKENLSEDEAIRMGIAALKSAVADES----SMKEPEIASIKMGET-FHVFTSEEVSKYL 233
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.941e-39 Identity = 89/244 (36.48%), Postives = 146/244 (59.84%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEA----LSKLLVKHGVTQ 787 YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ S EK+++IDDH+ A +G+++DA L++ ARV+AQ +Y EP+ VE + + +CD KQ YTQ+GG+RP+G + L AG D N +L+ +DPSG +K + + +Y+ D++ + A+ L + L + + + LE+ V L K++ PE + ++L KH T+ Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAE-SIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNLP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDMNMDAAILLGMDALYRAAEG-KFDASTLEVGIVSLQDK---KFRKLVPEEVENYVQQILEKHKETE 246
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.941e-39 Identity = 89/214 (41.59%), Postives = 133/214 (62.15%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 700 YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +IDDH+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD + + RPFGVS L AG D+N G LY +DPSG + S L++ + D+S +EA +A+ +L + M+ +T + +++A+V Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSILKQVMEE-KVTPNNVDIAKV 218
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.760e-39 Identity = 91/244 (37.30%), Postives = 145/244 (59.43%), Query Frame = 2 Query: 68 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEA----LSKLLVKHGVTQ 787 YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ S EK+++IDDH+ A +G+++DA L++ ARV+AQ +Y E + VE + + +CD KQ YTQ+GG+RP+G + L AG D +L+ +DPSG +K + + DYK+D++ E A+ L + L K + + LE+ V L K++ PE + ++L KH T+ Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAE-SIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDKRP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKEDMNIEAAILLGMDALYKAAEG-KFDAGTLEVGVVSLQDK---KFRKLEPEEVGNYVQQILEKHKETE 244
BLAST of CX069917 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.760e-39 Identity = 83/200 (41.50%), Postives = 124/200 (62.00%), Query Frame = 2 Query: 65 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDS 661 RYD T+FSP+G L+QVEYAMEA+ +A+G+ D VVL EKK T KL Q S S K+ +DDH+A A AG+ +DA +L+N AR++ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG + WK L+++YK + S +E V+LA++ L + ++S Sbjct: 3 RYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKL-QDSRSVRKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYK-ETSGQETVKLAIRALLEVVES 200 The following BLAST results are available for this feature:
BLAST of CX069917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069917 ID=CX069917; Name=CX069917; organism=Citrus sinensis; type=EST; length=854bpback to top |