CX069913

Overview
NameCX069913
Unique NameCX069913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_SYNE7 (Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.197e-92
Identity = 170/225 (75.56%), Postives = 193/225 (85.78%), Query Frame = -3 
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            +KEL YL  A+ NP++P AAIVGGSKVS+KIGVIE+LL+K D LL+GGGMIFTFYKAQG SVG SLVEEDKLDLA SLM KA+ KGV LLLP DVV+ADKFA DAN+K V   AIPDGWMGLD+GP+++K F EAL   +++IWNGPMGVFEFD+FA GTEAIA+ LA L+ KG TTIIGGGDSVAAVEKVG+A +MSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  177 EKELQYLQAAIDNPQRPLAAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDLARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEEALADCRSVIWNGPMGVFEFDQFAVGTEAIARSLAGLTRKGATTIIGGGDSVAAVEKVGVASEMSHISTGGGASLELLEGKVLPGVAALDDA 401
[Close]
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.197e-92
Identity = 170/225 (75.56%), Postives = 193/225 (85.78%), Query Frame = -3 
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            +KEL YL  A+ NP++P AAI+GGSKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G +VG SLVEEDKL+LA SL  KAK +GVSLLLPTDVV+AD FA DANS+ V    IPDGWMGLD+GPD++K F EAL  TKT+IWNGPMGVFEFDKFAAGTEAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  176 EKELQYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLELAKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIDNIPDGWMGLDIGPDSVKVFQEALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400
[Close]
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_SYNS9 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9902) GN=pgk PE=3 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 3.483e-92
Identity = 170/225 (75.56%), Postives = 191/225 (84.89%), Query Frame = -3 
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            +KEL YL GAV  PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G +VG SLVEEDKL+LA  L  KAK+KGV LLLPTDVV+AD FA DANS++   TAIPDGWMGLD+GPDAIK F  AL   KT+IWNGPMGVFEFDKFAAGT AIA  LAE+ GKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALD+A
Sbjct:  177 EKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLAVGKSLVEEDKLELAKELEAKAKAKGVELLLPTDVVLADNFAPDANSQIADVTAIPDGWMGLDIGPDAIKVFQAALADCKTVIWNGPMGVFEFDKFAAGTNAIATTLAEIGGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDNA 401
[Close]
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 5.941e-92
Identity = 169/225 (75.11%), Postives = 192/225 (85.33%), Query Frame = -3 
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            +KEL YL  A+ NP++P AAI+GGSKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G +VG SLVEEDKL+LA SL  KAK +GVSLLLPTDVV+AD FA DANS+ V    IPDGWMGLD+GPD++K F  AL  TKT+IWNGPMGVFEFDKFAAGTEAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  176 EKELQYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLELAKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKVFQAALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400
[Close]
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_SYNP6 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=pgk PE=3 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 7.760e-92
Identity = 169/225 (75.11%), Postives = 192/225 (85.33%), Query Frame = -3 
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            +KEL YL  A+ NP++P AAIVGGSKVS+KIGVIE+LL+K D LL+GGGMIFTFYKAQG SVG SLVEEDKLDLA SLM KA+ KGV LLLP DVV+ADKFA DAN+K V   AIPDGWMGLD+GP+++K F  AL   +++IWNGPMGVFEFD+FA GTEAIA+ LA L+ KG TTIIGGGDSVAAVEKVG+A +MSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  177 EKELQYLQAAIDNPQRPLAAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDLARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEGALADCRSVIWNGPMGVFEFDQFAVGTEAIARSLAGLTRKGATTIIGGGDSVAAVEKVGVASEMSHISTGGGASLELLEGKVLPGVAALDDA 401
[Close]
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_PROM3 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=pgk PE=3 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.949e-91
Identity = 168/225 (74.67%), Postives = 192/225 (85.33%), Query Frame = -3 
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            +KEL YL GA+ +PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+LA  L  KAK+KGV LLLPTDVV+AD F+ DANS+ V   AIPDGWMGLD+GPD+I  F +AL   +T+IWNGPMGVFEFDKFAAGT AIA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  177 EKELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFSPDANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401
[Close]
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 3.851e-91
Identity = 168/225 (74.67%), Postives = 194/225 (86.22%), Query Frame = -3 
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            +KEL+YL  A+ +P++P AAIVGGSKVS+KIGVIE+LLEKVD LL+GGGMIFTFYKA+G +VG SLVEEDKL+LA  L  KA+ KGV LLLPTDVV+AD FA DANS+VV   AIPD WMGLD+GP ++K F EAL   KT+IWNGPMGVFEFD+FA GTEAIA+ LAEL+ +GV TIIGGGDSVAAVEKVG+AD+MSHISTGGGASLELLEGK LPG+ ALDDA
Sbjct:  176 EKELEYLQNAIEHPRRPLAAIVGGSKVSSKIGVIEALLEKVDKLLIGGGMIFTFYKARGLNVGKSLVEEDKLELAKHLETKAQEKGVELLLPTDVVVADNFANDANSQVVSIEAIPDDWMGLDIGPASVKRFQEALQDCKTVIWNGPMGVFEFDQFAKGTEAIARYLAELTSQGVCTIIGGGDSVAAVEKVGVADRMSHISTGGGASLELLEGKQLPGIAALDDA 400
[Close]
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_SYNPW (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH7803) GN=pgk PE=3 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 3.851e-91
Identity = 169/225 (75.11%), Postives = 190/225 (84.44%), Query Frame = -3 
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            +KEL YL GAV  PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+LA  L  KAK+KGV LLLPTDVV+AD FA DANS+V   TAIPDGWMGLD+GPDA+K F  AL   +T+IWNGPMGVFEF+KFA GT AIA  LAELS KG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV AL+DA
Sbjct:  177 EKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVELLLPTDVVLADNFAPDANSQVADVTAIPDGWMGLDIGPDAVKVFQAALADCQTVIWNGPMGVFEFEKFATGTNAIATTLAELSAKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALNDA 401
[Close]
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_SYNR3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain RCC307) GN=pgk PE=3 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 8.579e-91
Identity = 169/225 (75.11%), Postives = 191/225 (84.89%), Query Frame = -3 
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            +KEL YL GAV +PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+LA  L  KAK+KGV LLLPTDVV+AD FA DANS+V    AIP+GWMGLD+GPD+IK F +AL   KT+IWNGPMGVFEFDKFAAGT AIA  LAELS KG  TIIGGGDSVAAVEK GLA +MSHISTGGGASLELLEGK LPGV ALD+A
Sbjct:  177 EKELQYLQGAVDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADNFAPDANSQVASIDAIPEGWMGLDIGPDSIKVFQDALGDCKTVIWNGPMGVFEFDKFAAGTNAIATTLAELSAKGCCTIIGGGDSVAAVEKAGLAAQMSHISTGGGASLELLEGKVLPGVAALDEA 401
[Close]
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.121e-90
Identity = 168/225 (74.67%), Postives = 191/225 (84.89%), Query Frame = -3 
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            +KEL YL GA+ +PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+LA  L  KAK+KGV LLLPTDVV+AD FA  ANS+ V   AIPDGWMGLD+GPD+I  F +AL   +T+IWNGPMGVFEFDKFAAGT AIA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  177 EKELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFAPAANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401
The following BLAST results are available for this feature:
BLAST of CX069913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SYNE71.197e-9275.56Phosphoglycerate kinase OS=Synechococcus elongatus... [more]
PGK_ANAVT1.197e-9275.56Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGK_SYNS93.483e-9275.56Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_ANASP5.941e-9275.11Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]
PGK_SYNP67.760e-9275.11Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROM32.949e-9174.67Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_THEEB3.851e-9174.67Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_SYNPW3.851e-9175.11Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNR38.579e-9175.11Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROMM1.121e-9074.67Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F05-K9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069913 ID=CX069913; Name=CX069913; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAACACAC
CCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAACTTGT
CAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAGATTTG
GCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCAACAAG
GGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGATCATTC
CTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAATAACA
CCGATCTTAGTTGACACCTTTGAACCACCAACAATGGCAGCAAATGGTTT
CTTGGGATTTGAAACAGCTCCAACAAGATAATCTAGTTCCTTTTGCA
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