CX069913

Overview
NameCX069913
Unique NameCX069913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOP1 (Phosphoglycerate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.065e-67
Identity = 132/224 (58.93%), Postives = 164/224 (73.21%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV  P++PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG++VGSSLVEEDK++ A  ++ KA+ KGV LLLP D  +A +F  D  + V     I +G+MGLD+GP     ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE      TTIIGGGDS AAV  +G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  177 QKELKFLGDAVETPERPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTVGSSLVEEDKVEYAKEMLAKAEEKGVKLLLPVDHRVAKEF-KDVEAVVTEDQNIAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAEAD---ATTIIGGGDSAAAVNILGFGDKMSHISTGGGASLEFLEGKVLPGIAALND 396          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_FERNB (Phosphoglycerate kinase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.128e-66
Identity = 122/225 (54.22%), Postives = 161/225 (71.56%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ +L  A  NP KP+  ++GG+KVS KIGVI +LL K D +++GG M+FTF++A G   G+SLVEEDK+DLA  L+E+AK KGV L++PTD V A K  A    KV      IP+GW G D+GP +I+     L   KTI+WNGP+GVFE + FA GT+A+A+ +A L+ KGVTT++GGGDS AAV + GL  K SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  172 EKEIKFLSKATHNPDKPYVVVLGGAKVSDKIGVITNLLNKADKIIIGGAMMFTFWRALGKQTGNSLVEEDKIDLAKQLLEQAKEKGVELVIPTDAVCAQKMEAGVEKKVFTCEEGIPEGWAGYDIGPASIELIKSKLADAKTIVWNGPLGVFEIEDFANGTKAVAEFIASLTDKGVTTVVGGGDSAAAVSQFGLEKKFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_BACC2 (Phosphoglycerate kinase OS=Bacillus cereus (strain G9842) GN=pgk PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.128e-66
Identity = 120/224 (53.57%), Postives = 166/224 (74.11%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KELD L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++LA   M+ AK KGV+  +P DVVI ++F+  A +++V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +   ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  172 EKELDVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTQIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEDTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_ACIBL (Phosphoglycerate kinase OS=Acidobacteria bacterium (strain Ellin345) GN=pgk PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.474e-66
Identity = 131/223 (58.74%), Postives = 159/223 (71.30%), Query Frame = -3
Query:  180 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADAN-SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 845
            QKELDYL  A SNP KPF AI+GG+KVS KIGVI++L+ KVD +++GGGM +TF KAQG  +G SL E DKLDLA  ++  A  +G+  LLP D V ADKF   A   ++    +IP   M LD+GP  +  FSE +   +TI+WNGPMGVFEFD FA GT AIAK +A     G T+I+GGGDSVAAV   G+ADK++HISTGGGASLE LEGK LPGV AL
Sbjct:  180 QKELDYLGKATSNPAKPFVAILGGAKVSDKIGVIQNLMAKVDAIIIGGGMAYTFLKAQGQEIGKSLFEADKLDLAKQILADAHKRGLKFLLPVDHVTADKFDMHATPHQIGEGQSIPAEQMALDIGPKTVALFSEEIAKARTIVWNGPMGVFEFDNFAKGTRAIAKAVA--GNSGATSIVGGGDSVAAVHDAGVADKITHISTGGGASLEFLEGKKLPGVEAL 400          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_BACCN (Phosphoglycerate kinase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pgk PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.925e-66
Identity = 120/224 (53.57%), Postives = 164/224 (73.21%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KEL+ L  A+SNP +PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E+DK++LA   M  AK KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   F+ GT A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  172 EKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKIELAKEFMALAKEKGVNFYMPVDVVITEEFSETATTKIVDIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFSNGTRAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_LACCB (Phosphoglycerate kinase OS=Lactobacillus casei (strain BL23) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.283e-66
Identity = 128/224 (57.14%), Postives = 166/224 (74.11%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ +L  AV NPK PF AI+GG+KVS KIGVIE+L+ K D +L+GGGM +TFY A+G S+G SLVE+DK++LA  +M++A   G  LLLP D V+A +F+ DA  KVV    IPDG+M LD+GP  IK F +AL   KT++WNGPMGVFE   +A GT  + + L +L  K  TTIIGGGDS AA +++G+A K++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  178 EKEIKFLGDAVDNPKHPFIAILGGAKVSDKIGVIENLVPKADKILIGGGMTYTFYAAKGMSIGKSLVEKDKIELAKKIMDQA---GDKLLLPVDSVVATEFSNDAPHKVVDGD-IPDGYMALDIGPKTIKEFKDALQGAKTVVWNGPMGVFEMSNYAEGTLEVGRALGDL--KDATTIIGGGDSTAAAKQLGIAPKITHISTGGGASLEYLEGKTLPGIAAISD 395          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_LACC3 (Phosphoglycerate kinase OS=Lactobacillus casei (strain ATCC 334) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.283e-66
Identity = 128/224 (57.14%), Postives = 166/224 (74.11%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ +L  AV NPK PF AI+GG+KVS KIGVIE+L+ K D +L+GGGM +TFY A+G S+G SLVE+DK++LA  +M++A   G  LLLP D V+A +F+ DA  KVV    IPDG+M LD+GP  IK F +AL   KT++WNGPMGVFE   +A GT  + + L +L  K  TTIIGGGDS AA +++G+A K++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  178 EKEIKFLGDAVDNPKHPFIAILGGAKVSDKIGVIENLVPKADKILIGGGMTYTFYAAKGMSIGKSLVEKDKIELAKKIMDQA---GDKLLLPVDSVVATEFSNDAPHKVVDGD-IPDGYMALDIGPKTIKEFKDALQGAKTVVWNGPMGVFEMSNYAEGTLEVGRALGDL--KDATTIIGGGDSTAAAKQLGIAPKITHISTGGGASLEYLEGKTLPGIAAISD 395          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_DEIGD (Phosphoglycerate kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.283e-66
Identity = 125/220 (56.82%), Postives = 168/220 (76.36%), Query Frame = -3
Query:  180 ELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 839
            E++ L   + +P +P+  I+GG+KVS KI VIE+LL +VD +L+GGGM+FTF +A+G  +G+SLVEED++  A  L+E+    G  L+LPTD V AD+FA DA ++VVPA  IPDGWMGLD+GP+  ++++EAL   KT+ WNGPMGVFEF  FAAGT A+A+ +AEL G    T++GGGDSV+A+ + G A K+SHISTGGGASLELLEG+ LPGV A+
Sbjct:  173 EVEALSRLLHDPARPYVVIIGGAKVSDKIKVIENLLPRVDRMLIGGGMMFTFIRARGGQIGNSLVEEDQVAYARQLLEQY---GDRLMLPTDAVAADRFAPDAQTRVVPADRIPDGWMGLDIGPETARAYAEALQGAKTVFWNGPMGVFEFPAFAAGTNAVAQAVAEL-GNQAYTVVGGGDSVSAINQSGQASKVSHISTGGGASLELLEGQLLPGVEAM 388          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOBM (Phosphoglycerate kinase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.283e-66
Identity = 126/224 (56.25%), Postives = 162/224 (72.32%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF K+ G++VG SL+EEDK++ A  ++ KAK KGV+ LLP D+ IAD+F  DA   V     + +G+MGLD+G    K +++A+ + KT+IWNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV   G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  177 QKELKFLGNAVETPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKSLGYTVGDSLLEEDKVEYAKEMINKAKEKGVNFLLPVDITIADRFDKDAEPIVTEDQNVKEGYMGLDIGSKTAKIYADAIKSAKTVIWNGPMGVFEFKNFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNIFGFGDKMSHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_BACWK (Phosphoglycerate kinase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.283e-66
Identity = 120/224 (53.57%), Postives = 165/224 (73.66%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KELD L  A+SNP++PF AI+GG+KV  KIGVI  LL+KVD L++GGG+ +TF KA GH +G SL E DK++LA   M+ AK KGV+  +P DVVI ++F+  A +++V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +   ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  172 EKELDVLGKALSNPERPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCENDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATTQIVGIDSIPSTWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEDTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
The following BLAST results are available for this feature:
BLAST of CX069913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLOP15.065e-6758.93Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_FERNB1.128e-6654.22Phosphoglycerate kinase OS=Fervidobacterium nodosu... [more]
PGK_BACC21.128e-6653.57Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_ACIBL1.474e-6658.74Phosphoglycerate kinase OS=Acidobacteria bacterium... [more]
PGK_BACCN1.925e-6653.57Phosphoglycerate kinase OS=Bacillus cereus subsp. ... [more]
PGK_LACCB3.283e-6657.14Phosphoglycerate kinase OS=Lactobacillus casei (st... [more]
PGK_LACC33.283e-6657.14Phosphoglycerate kinase OS=Lactobacillus casei (st... [more]
PGK_DEIGD3.283e-6656.82Phosphoglycerate kinase OS=Deinococcus geothermali... [more]
PGK_CLOBM3.283e-6656.25Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_BACWK3.283e-6653.57Phosphoglycerate kinase OS=Bacillus weihenstephane... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F05-K9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069913 ID=CX069913; Name=CX069913; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAACACAC
CCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAACTTGT
CAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAGATTTG
GCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCAACAAG
GGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGATCATTC
CTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAATAACA
CCGATCTTAGTTGACACCTTTGAACCACCAACAATGGCAGCAAATGGTTT
CTTGGGATTTGAAACAGCTCCAACAAGATAATCTAGTTCCTTTTGCA
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