CX069913

Overview
NameCX069913
Unique NameCX069913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_LACF3 (Phosphoglycerate kinase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.288e-66
Identity = 125/224 (55.80%), Postives = 167/224 (74.55%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ +L  AV+NP +PF AI+GG+KVS KIGVI +LL+K D +++GGGM +TFY A+G  +G+SLVEEDK+D+A  ++EKA   G  L+LP D V+ADKFA DAN+KVV    I DGWM LD+GP +I+ F + L   KT++WNGPMGVFE   FA GT  + + L  L  +G TTI+GGGDS AA +++G++DK++HISTGGGASL  LEG  LPG+ A+ D
Sbjct:  183 EKEIKFLGDAVTNPVRPFVAILGGAKVSDKIGVINNLLDKADKVIVGGGMTYTFYAAKGIKIGNSLVEEDKIDVAKEILEKA---GDKLVLPVDNVVADKFANDANTKVVEGD-IDDGWMALDIGPKSIEEFKKVLADAKTVVWNGPMGVFEMSNFAKGTLEVGQFLGTL--EGATTIVGGGDSTAAAKQLGISDKLTHISTGGGASLAYLEGDVLPGIAAISD 400          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_THELT (Phosphoglycerate kinase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.600e-66
Identity = 125/225 (55.56%), Postives = 157/225 (69.78%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+D+L      P  P+  ++GG+KVS KIGVI +LL K D LL+GG M+FTF KAQG  VGSSLVE DKLDLA  ++E+AK K V ++LP D ++A K  A    K       I DGWMGLD+GP  IK F EAL   KT++WNGPMGVFE + FA GT+A+A+ +A++ G   TT+IGGGDS AAV K GL    SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  173 EKEIDFLNKVTYEPDHPYVVVLGGAKVSDKIGVITNLLNKADKLLIGGAMMFTFLKAQGLKVGSSLVENDKLDLAKQILEQAKEKKVEIVLPVDAIVAQKIEAGVEKKTADLKDGIDDGWMGLDIGPKTIKVFEEALKNAKTVVWNGPMGVFEIEDFAGGTKAVAEMIAKIKG---TTVIGGGDSAAAVAKFGLESAYSHVSTGGGASLEFLEGKDLPGIRSIAD 394          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_PELLD (Phosphoglycerate kinase OS=Pelodictyon luteolum (strain DSM 273) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.600e-66
Identity = 125/223 (56.05%), Postives = 163/223 (73.09%), Query Frame = -3
Query:  177 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 845
            +KEL YL  A+ +P++PF AI+GGSK+S KI VI++L  KVD +L+GG M+FTF+KAQG   G SLVE++K +LA  L+ KAKS GV L+LP DV+ A + + DA    V    + +  MG+D+GP   +++ + +   KT++WNGPMGVFE D FA GT A+A+ LA  + KG TTIIGGGDS AAV K GLADKM+HISTGGGASLE LEGK LPG+ AL+
Sbjct:  174 EKELMYLGKALQSPERPFVAILGGSKISGKIDVIDNLFSKVDTVLVGGAMVFTFFKAQGLETGRSLVEDNKTELALELLAKAKSMGVRLILPEDVMAAPEISPDAPFHAVSVDQLAENEMGVDIGPKTAETYRKEILGAKTVLWNGPMGVFEIDNFAGGTIAVAEALAAATAKGATTIIGGGDSAAAVAKAGLADKMTHISTGGGASLEFLEGKELPGIAALN 396          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOBA (Phosphoglycerate kinase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=pgk PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.600e-66
Identity = 128/224 (57.14%), Postives = 163/224 (72.77%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV  P+KPF AI+GG+KVS KI VI +LL+KVD +++GGGM +TF KAQG+ +G+SLVEED+LD A  ++ KA+ KGV+ LLP D  +A +F  D  + V     IP G MGLD+GP   K +++A+   KT+IWNGPMGVFEF+ F  GT A+AK +A+      TTIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  177 QKELKFLGNAVETPEKPFVAILGGAKVSDKIAVINNLLDKVDTIIIGGGMAYTFLKAQGYEIGTSLVEEDRLDYAKEMIAKAEEKGVNFLLPVDHRVAAEF-KDVEATVTEDQNIPAGTMGLDIGPKTEKLYADAVKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAD---SNATTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKVLPGISALND 396          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_EXISA (Phosphoglycerate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=pgk PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 7.314e-66
Identity = 126/224 (56.25%), Postives = 164/224 (73.21%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KEL+ L  A+SNP +PF AI+GGSKV+ KIGVI+ LL+ VD L++GGG+ +TF KA GH VG+SL+EEDKLDLA   M+KA+ KGV  L+P D VI  +F  +     V   +IP   MGLD+GP  ++ +++A+  +K ++WNGPMGVFE DK+A GT+ +A+ LA+       +IIGGGDS AA  K GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  173 EKELEVLGKALSNPDRPFTAIIGGSKVADKIGVIDHLLDIVDTLIIGGGLSYTFSKALGHEVGTSLLEEDKLDLARQFMKKAEDKGVKFLMPVDCVITKEFGEETYVGPVDIDSIPADHMGLDIGPKTVELYADAIRESKLVVWNGPMGVFELDKYANGTKGVAQALAD---SDAYSIIGGGDSAAAAAKFGLADKMSHISTGGGASLEFMEGKKLPGVEALND 393          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_BEUC1 (Phosphoglycerate kinase OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=pgk PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 7.314e-66
Identity = 122/223 (54.71%), Postives = 165/223 (73.99%), Query Frame = -3
Query:  174 ELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALDD 839
            E+  L  A  +P++P+A ++GGSKVS K+GVI +LL K D LL+GGGM+FTF  AQGH VG SL+EED++D     +++A+  GV+++LPTD+V A+ FAADA  +VV A AIP   +GLD+GP++ ++F+  +   KT++WNGPMGVFEFD FAAGT A+A+ L + +  G  TI+GGGDS AAV  +G  +   SHISTGGGASLE LEGKTLPG+  L+D
Sbjct:  177 EVTALRKATDDPERPYAVVLGGSKVSDKLGVIANLLTKADTLLIGGGMVFTFLAAQGHQVGKSLLEEDQIDTVKGYLDQAEQSGVTIVLPTDIVAAEAFAADAPHQVVAADAIPADSIGLDIGPESGEAFAAVIRGAKTVVWNGPMGVFEFDAFAAGTRAVAQGLTDATAAGAFTIVGGGDSAAAVRSLGFDEAGFSHISTGGGASLEFLEGKTLPGLAVLED 399          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_TREDE (Phosphoglycerate kinase OS=Treponema denticola GN=pgk PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.248e-65
Identity = 118/223 (52.91%), Postives = 164/223 (73.54%), Query Frame = -3
Query:  177 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 845
            +KE+ YL   ++NP KP  AI+GG+KVS+KI V+ESLL+    L++GGGM +TF K QG  +G SL EED +D A +L++KA+ +GV ++LP D + ++ F+ +A + +V +T IPD  MG+DVGP  +  + E + ++K+I+WNGP+GVFEF+ F+ GTE  A+ +A  + KG  TI+GGGDSVAAV K  LADKMSH+STGGGASLE LEGK LPG+  LD
Sbjct:  195 EKEIKYLEPMLNNPAKPMTAIIGGAKVSSKIAVLESLLKNASSLIIGGGMAYTFLKVQGKKIGKSLFEEDFMDTAKNLLDKAEKQGVKIILPVDHICSETFSPNAEAVLVESTDIPDNLMGMDVGPKTLALYKEIILSSKSIVWNGPVGVFEFEAFSKGTEETARLVAAATEKGALTIVGGGDSVAAVNKFNLADKMSHVSTGGGASLEFLEGKVLPGIACLD 417          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_NOCFA (Phosphoglycerate kinase OS=Nocardia farcinica GN=pgk PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.248e-65
Identity = 124/223 (55.61%), Postives = 159/223 (71.30%), Query Frame = -3
Query:  174 ELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALDD 839
            E+D L     N ++P+A ++GGSKVS K+ VIE+L  KVD L++GGGM FTF  AQG SVGSSL++E+ +D    L+E+       + LP DVV+AD F+ADA SK VPA  IPDGWMGLD+G +++  F+  L   KT+ WNGPMGVFEF+KFAAGT  +A+ +   +GKG  T++GGGDS AAV  +GL  D  SHISTGGGASLE LEGK LPG+  L+D
Sbjct:  185 EVDVLAKLTDNTERPYAVVLGGSKVSDKLAVIEALAPKVDTLVIGGGMCFTFLAAQGLSVGSSLLQEEMIDTCKGLLERYADV---IHLPRDVVVADSFSADAESKCVPANEIPDGWMGLDIGAESVDRFAALLTEAKTVFWNGPMGVFEFEKFAAGTRGVAEAIVAATGKGAFTVVGGGDSAAAVRALGLPEDGFSHISTGGGASLEYLEGKELPGISVLED 404          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_ENTFA (Phosphoglycerate kinase OS=Enterococcus faecalis GN=pgk PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.629e-65
Identity = 128/224 (57.14%), Postives = 165/224 (73.66%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ ++  AV NPK+PF AI+GG+KVS KI VIE+L+EK D +L+GGGM +TF KAQG+SVG SL+EEDK+DLA SLMEKA   G  L+LP D V++ +F+ DA    VP+T IPD   GLD+G   I+ F+  L   KT++WNGPMGVFE   FA GT  + + +A L  +  TTIIGGGDS AA  ++G  +K SHISTGGGASLELLEGKTLPG+ +++D
Sbjct:  178 EKEIKFIGEAVENPKRPFVAILGGAKVSDKIAVIENLIEKADKILIGGGMAYTFMKAQGYSVGLSLLEEDKVDLAKSLMEKA---GDKLVLPVDTVVSKEFSNDAPFHTVPSTEIPDDEEGLDIGEKTIELFANELQGAKTVVWNGPMGVFEMSNFAKGTIGVCEAIANL--EDATTIIGGGDSAAAAIQLGYENKFSHISTGGGASLELLEGKTLPGLASIND 396          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_LACBA (Phosphoglycerate kinase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=pgk PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.779e-65
Identity = 124/224 (55.36%), Postives = 164/224 (73.21%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ ++ GAV NP+ PF AI+GG+KVS KIGVI++LL K D +L+GGGM +TFY A+G  +G+SLVE DK+DLA  +++KA   G  L+LP D V+A+KF  DA  K V    +PDG+M LD+GP ++  F + L   KT++WNGPMGVFE   +A GT  I K L  L+     TI+GGGDS AAV+++G+ADK+SHISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  182 EKEITFIGGAVDNPEHPFVAILGGAKVSDKIGVIDNLLAKADKILIGGGMTYTFYAAKGMKIGNSLVETDKIDLAKEILDKA---GDKLVLPVDSVVAEKFDNDAPHKTVEGD-VPDGYMALDIGPKSVAEFKDVLKDAKTVVWNGPMGVFEMSNYAEGTLEIGKFLGTLT--NAKTIVGGGDSTAAVQQLGVADKLSHISTGGGASLEYLEGKTLPGIAAISD 399          
The following BLAST results are available for this feature:
BLAST of CX069913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_LACF34.288e-6655.80Phosphoglycerate kinase OS=Lactobacillus fermentum... [more]
PGK_THELT5.600e-6655.56Phosphoglycerate kinase OS=Thermotoga lettingae (s... [more]
PGK_PELLD5.600e-6656.05Phosphoglycerate kinase OS=Pelodictyon luteolum (s... [more]
PGK_CLOBA5.600e-6657.14Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_EXISA7.314e-6656.25Phosphoglycerate kinase OS=Exiguobacterium sp. (st... [more]
PGK_BEUC17.314e-6654.71Phosphoglycerate kinase OS=Beutenbergia cavernae (... [more]
PGK_TREDE1.248e-6552.91Phosphoglycerate kinase OS=Treponema denticola GN=... [more]
PGK_NOCFA1.248e-6555.61Phosphoglycerate kinase OS=Nocardia farcinica GN=p... [more]
PGK_ENTFA1.629e-6557.14Phosphoglycerate kinase OS=Enterococcus faecalis G... [more]
PGK_LACBA2.779e-6555.36Phosphoglycerate kinase OS=Lactobacillus brevis (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F05-K9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069913 ID=CX069913; Name=CX069913; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAACACAC
CCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAACTTGT
CAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAGATTTG
GCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCAACAAG
GGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGATCATTC
CTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAATAACA
CCGATCTTAGTTGACACCTTTGAACCACCAACAATGGCAGCAAATGGTTT
CTTGGGATTTGAAACAGCTCCAACAAGATAATCTAGTTCCTTTTGCA
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