CX069913

Overview
NameCX069913
Unique NameCX069913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_GEOSF (Phosphoglycerate kinase OS=Geobacter sp. (strain FRC-32) GN=pgk PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.630e-65
Identity = 126/225 (56.00%), Postives = 164/225 (72.89%), Query Frame = -3
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            + E+ +   A++ P +P AAI+GG+KVS K+ V+E+L+ KVDI+++GGGM FTF KA+G SVG SLVE+D +D A  +++ A  +G+  LLP D V+AD+FAADA+ K V    IP  WM LDVGP +   FS+AL    T+IWNGPMGVFE D+FA GT AIA  +A L  K  TTIIGGGD+ +AV K G+ADK+S+ISTGGGA LELLEGK LPGV  L+ +
Sbjct:  175 KNEMTFFEKAMTRPVRPLAAILGGAKVSGKLEVLETLVGKVDIIIIGGGMAFTFLKARGLSVGKSLVEDDLIDTAKRILDNAAKRGIEFLLPEDCVVADRFAADADCKTVSVNDIPSEWMALDVGPASTARFSDALKEANTVIWNGPMGVFEMDRFAKGTFAIADVVAGL--KNATTIIGGGDTDSAVRKAGVADKVSYISTGGGAFLELLEGKKLPGVEVLEQS 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_LACPL (Phosphoglycerate kinase OS=Lactobacillus plantarum GN=pgk PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.741e-65
Identity = 124/224 (55.36%), Postives = 167/224 (74.55%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ +L  AV NPK PF AI+GG+KVS KIGVI+ L+ K D +++GGGM +TFY A+G  +G+SLVE+DK++LA S++EKA   G  L+LP+D ++A+KF  D  SKVV   +IPDG+M LD+GP +I+ F + L   KT++WNGPMGVFE   +A GT  I K L  LS    TTI+GGGDS AAV+++G+ DK++HISTGGGASLE LEGK LPG+ A+ +
Sbjct:  182 EKEIKFLGDAVDNPKHPFVAILGGAKVSDKIGVIDHLISKADKIIIGGGMTYTFYAAKGMGIGNSLVEKDKIELAKSIIEKA---GDKLVLPSDSIVAEKFDNDVPSKVVEG-SIPDGYMALDIGPKSIEEFEDVLRDAKTVVWNGPMGVFEMSNYAKGTLEIGKFLGTLS--DATTIVGGGDSTAAVKQLGVGDKLTHISTGGGASLEYLEGKELPGIAAISE 399          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_LEUCK (Phosphoglycerate kinase OS=Leuconostoc citreum (strain KM20) GN=pgk PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 6.191e-65
Identity = 122/225 (54.22%), Postives = 169/225 (75.11%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATA-IPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ +L  AV+NP +PF AI+GG+KVS KI +++SLL K D +++GGGM +TF  A+G  +G+SL E DK++LA  LM +A  K   L+LP D + AD F+ DA ++VV ATA IPDG+MGLD+GP ++K   + L   KT++WNGPMGVFE   FA GT AI ++L +++  G TTI+GGGDS AAV+++G+ADK+SHISTGGGASLE LEGK LPG+ ++ +
Sbjct:  183 EKEIKFLGDAVANPVRPFVAIIGGAKVSDKIEIVKSLLAKADKVIVGGGMAYTFDAAKGEKIGNSLFEADKVELAKELMAEAGDK---LVLPVDSIAADAFSNDAKTEVVDATAGIPDGYMGLDIGPKSVKLLQDTLADAKTVVWNGPMGVFEMPNFAKGTLAIGEELVKVTENGGTTIVGGGDSTAAVQQLGVADKLSHISTGGGASLEYLEGKELPGIASISE 404          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_RUBXD (Phosphoglycerate kinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pgk PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.056e-64
Identity = 125/224 (55.80%), Postives = 162/224 (72.32%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            ++ELDYL G + +P++PF AI+GG+KVS K+GVIESLL   D LL+GG M FTF KA+G  VG+SLVE+D L  A  LME A  +   L+LP DVV+A++    A ++ VP   IP+GWMGLD+GP  ++ F   +   +TI WNGPMGVFE D FA GTE +A+ +AE    G T+++GGGDSVAAV K+GL D+MSHISTGGGASLE +EG+ LPGV  L +
Sbjct:  171 EQELDYLDGVLRSPERPFVAILGGAKVSDKLGVIESLLGVADRLLVGGAMCFTFLKARGLGVGASLVEDDYLGEARRLMEGAADR---LVLPVDVVVAERMEEGARTRTVPVEEIPEGWMGLDIGPRTVELFRRHILQARTIFWNGPMGVFEIDAFARGTEGVARAVAE---SGATSVVGGGDSVAAVRKLGLEDRMSHISTGGGASLEYVEGRELPGVAVLPE 388          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_LACRJ (Phosphoglycerate kinase OS=Lactobacillus reuteri (strain JCM 1112) GN=pgk PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.353e-64
Identity = 123/224 (54.91%), Postives = 166/224 (74.11%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ +L  AV NP++PF AI+GG+KVS KIGVI++LL+K D +++GGGM +TFY A+G  VG+SLVE+DK+D+A  +++KA   G  L+LP D V+ADKF  DA++KVV    I +GWM LD+GP +++ F   L   KT++WNGPMGVFE   FA GT  I K L  L+    TTI+GGGDS AAV+++G+ADK++HISTGGGASL  LEG  LPG+ A+ D
Sbjct:  183 EKEIKFLGDAVDNPERPFVAILGGAKVSDKIGVIDNLLDKADKIIIGGGMAYTFYAAKGIKVGNSLVEKDKIDVAKQILDKA---GDKLVLPIDNVVADKFNNDADTKVVEGD-IDNGWMALDIGPKSVEEFKNVLKDAKTVVWNGPMGVFEMPNFAKGTLEIGKFLGTLT--DATTIVGGGDSTAAVKELGVADKLTHISTGGGASLTYLEGNELPGIAAISD 400          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CAEEL (Probable phosphoglycerate kinase OS=Caenorhabditis elegans GN=pgk-1 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.353e-64
Identity = 124/227 (54.63%), Postives = 164/227 (72.25%), Query Frame = -3
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYK-AQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            + EL Y   A+ NP +PF AI+GG+KV+ KI +I++LL+KV+ +++GGGM +TF K AQG  +G+SL +E+   +   L+E AK+KGV + LP D VIADKFA DA SK V A   +PDG MGLDVGP++ K F+ A+   KTI+WNGP GVFEFDKFA GT+++  ++ + +  G  TIIGGGD+  A +K    DK+SH+STGGGASLELLEGK LPGV AL  A
Sbjct:  190 KNELSYFSKALDNPARPFLAILGGAKVADKIQLIKNLLDKVNEMIIGGGMAYTFLKVAQGVKIGNSLYDEEGAKIVNELLEAAKAKGVQIHLPVDFVIADKFAEDATSKTVTAEEGVPDGHMGLDVGPESSKIFAAAIQRAKTIVWNGPAGVFEFDKFATGTKSLMDEVVKATAAGAITIIGGGDTATAAKKYNTEDKVSHVSTGGGASLELLEGKVLPGVDALSPA 416          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_RHOSR (Phosphoglycerate kinase OS=Rhodococcus sp. (strain RHA1) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.013e-64
Identity = 120/224 (53.57%), Postives = 161/224 (71.88%), Query Frame = -3
Query:  177 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 845
            + E+  L      P++P+A ++GGSKVS K+ VIE+L  KVD L++GGGM +TF  AQG SVG+SL EE  +D   +L+E+       + +P DVVIAD F+ADA SK+V    IPDGWMGLD+GP +++ F+  L + KT+ WNGPMGVFEF+KFAAGT+ +A+ + E +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  182 EAEIKVLGKLTEEPERPYAVVLGGSKVSDKLAVIEALAPKVDTLVIGGGMYYTFLAAQGVSVGNSLCEESMIDTCKALLEQYADV---IHIPQDVVIADSFSADAESKIVSVLEIPDGWMGLDIGPQSVRRFAAILTSAKTVFWNGPMGVFEFEKFAAGTKGVAEAIIEATGKGAYSVVGGGDSAAAVRQLGLPEDGFSHISTGGGASLEYLEGKELPGIAVLE 402          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_RHOOB (Phosphoglycerate kinase OS=Rhodococcus opacus (strain B4) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.013e-64
Identity = 120/222 (54.05%), Postives = 161/222 (72.52%), Query Frame = -3
Query:  177 ELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 839
            E+  L    + P++P+A ++GGSKVS K+ VIE+L  KVD L++GGGM +TF  AQG SVG+SL EE  +D   +L+E+       + +P DVVIAD F+ADA SK+V    IPDGWMGLD+GP +++ F+  L + KT+ WNGPMGVFEF+KFAAGT+ +A+ + E +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  184 EIKVLGKLTAEPERPYAVVLGGSKVSDKLAVIEALAPKVDTLVIGGGMYYTFLAAQGLSVGNSLCEESMIDTCKALLEQYADV---IHIPQDVVIADSFSADAESKIVSVLEIPDGWMGLDIGPQSVRRFAAILTSAKTVFWNGPMGVFEFEKFAAGTKGVAEAIIEATGKGAYSVVGGGDSAAAVRQLGLPEDGFSHISTGGGASLEYLEGKELPGIAVLE 402          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOBB (Phosphoglycerate kinase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.013e-64
Identity = 126/224 (56.25%), Postives = 159/224 (70.98%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV  P+KPF AI+GG+KVS KI VI +LL+KVD +++GGGM +TF KAQG+ +G+SLVEED+LD A  ++ KA+ K V  LLP D  +A +F  D  + V     IP G MGLD+GP     ++ A+   KT+IWNGPMGVFEF+ F  GT A+AK +A+      TTIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  177 QKELKFLGNAVETPEKPFVAILGGAKVSDKIAVINNLLDKVDTIIIGGGMAYTFLKAQGYEIGTSLVEEDRLDYAKEMIAKAEEKSVKFLLPVDHRVAAEF-KDVEATVTNDQNIPTGNMGLDIGPKTETVYANAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAD---SNATTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKVLPGISALND 396          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_PORGI (Phosphoglycerate kinase OS=Porphyromonas gingivalis GN=pgk PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.241e-64
Identity = 117/222 (52.70%), Postives = 164/222 (73.87%), Query Frame = -3
Query:  180 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 845
            +KE+  +   + + K+PF AI+GGSKVSTKI +IE+LL KVD L+L GGM +TF KA G  +G S+VE+DKLDLA  +++KA  KGV+L+L  D  +AD+F  DA ++V     IPD WMG+D+GP +I+ F + +  +KTI+WNGP GVFEFD F+ G++A+ + + E +  G  +++GGGDSVA V K GLADK+S++STGGGA LE +EGKTLPG+ A+
Sbjct:  195 EKEVKAVERVLHDIKRPFTAIMGGSKVSTKIEIIENLLNKVDNLILTGGMTYTFTKAAGGRIGLSIVEDDKLDLARDIVKKAAEKGVNLILSVDTKVADRFDNDAATQVCSNMEIPDDWMGMDIGPRSIEKFRKVILESKTILWNGPTGVFEFDNFSIGSKAVGEAIVEATANGAFSLVGGGDSVACVNKFGLADKVSYVSTGGGALLEAIEGKTLPGIAAI 416          
The following BLAST results are available for this feature:
BLAST of CX069913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_GEOSF3.630e-6556.00Phosphoglycerate kinase OS=Geobacter sp. (strain F... [more]
PGK_LACPL4.741e-6555.36Phosphoglycerate kinase OS=Lactobacillus plantarum... [more]
PGK_LEUCK6.191e-6554.22Phosphoglycerate kinase OS=Leuconostoc citreum (st... [more]
PGK_RUBXD1.056e-6455.80Phosphoglycerate kinase OS=Rubrobacter xylanophilu... [more]
PGK_LACRJ2.353e-6454.91Phosphoglycerate kinase OS=Lactobacillus reuteri (... [more]
PGK_CAEEL2.353e-6454.63Probable phosphoglycerate kinase OS=Caenorhabditis... [more]
PGK_RHOSR4.013e-6453.57Phosphoglycerate kinase OS=Rhodococcus sp. (strain... [more]
PGK_RHOOB4.013e-6454.05Phosphoglycerate kinase OS=Rhodococcus opacus (str... [more]
PGK_CLOBB4.013e-6456.25Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_PORGI5.241e-6452.70Phosphoglycerate kinase OS=Porphyromonas gingivali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F05-K9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069913 ID=CX069913; Name=CX069913; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAACACAC
CCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAACTTGT
CAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAGATTTG
GCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCAACAAG
GGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGATCATTC
CTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAATAACA
CCGATCTTAGTTGACACCTTTGAACCACCAACAATGGCAGCAAATGGTTT
CTTGGGATTTGAAACAGCTCCAACAAGATAATCTAGTTCCTTTTGCA
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