CX069913

Overview
NameCX069913
Unique NameCX069913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_GEOLS (Phosphoglycerate kinase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=pgk PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.864e-61
Identity = 119/223 (53.36%), Postives = 157/223 (70.40%), Query Frame = -3
Query:  177 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 845
            + E+ +   A+SNP +P  AI+GG+KVS K+ V+E+L+ KVD +++GGGM FTF KA G+ VG SLVE++ +  A  +M+KAK KGV+  LP D V+A+ F A+A + V     IP+GWM LD+GP +   F+E L   KT+IWNGPMGVFE D F  GT A+A+ +        TT+IGGGD+ AAV K G+A K+S+ISTGGGA LELLEGK LPGV ALD
Sbjct:  175 KNEMTFFDKAMSNPVRPLVAILGGAKVSGKLEVLETLVNKVDKIVIGGGMAFTFLKAMGYGVGKSLVEDELIPTAKKIMDKAKKKGVTFYLPVDCVVANAFEANATNFVTTVQEIPEGWMALDIGPASATLFAETLRDAKTVIWNGPMGVFEMDAFCRGTFAVAEAVGNCY---ATTVIGGGDTDAAVNKAGVAAKVSYISTGGGAFLELLEGKILPGVKALD 394          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_BORHD (Phosphoglycerate kinase OS=Borrelia hermsii (strain DAH) GN=pgk PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.864e-61
Identity = 111/223 (49.78%), Postives = 162/223 (72.65%), Query Frame = -3
Query:  177 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 845
            +KE ++L   + NP+ PF +I+GGSKVS+KI V+ESLL K +++++GGGM +TF K +GHS+G SL+E + +D+A S ++KAK   V ++LP D ++A +F  D+  + V A  IPDG +G+D+G   ++   E L + KT+IWNGP+GVFEFD F+ GT  +A+ +A  SG    T++GGGDSVAAV K  L++K++H+STGGGASLE LEGK LPG+  L+
Sbjct:  172 EKEDEFLGKILKNPESPFVSIIGGSKVSSKIAVLESLLPKSNVMVIGGGMAYTFLKVEGHSIGKSLLENEYIDVAASFLKKAKELDVKVILPLDHIVASEFKEDSIPEYVDAIDIPDGKIGMDIGEKTLRKIEEVLVSAKTVIWNGPLGVFEFDSFSKGTAKVAEYVASCSG---ITVVGGGDSVAAVNKFNLSEKITHVSTGGGASLEYLEGKILPGIKVLE 391          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_PEDPA (Phosphoglycerate kinase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=pgk PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.435e-61
Identity = 117/224 (52.23%), Postives = 161/224 (71.88%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ +L  AV  PK PF AI+GG+KVS KIGVI+ LL K D +++GGGM +TFY A+G S+G+SLVE DK+D+A  ++ K    G  ++LP+D ++A+KF  D  +KVV    IPDG+M LD+GP ++  F + L   KT++WNGPMGVFE   +A GT  + K L  LS    TTI+GGGDS AAV+++G+ D+++HISTGGGASLE LEGK LPG+ A+ +
Sbjct:  182 EKEIKFLGEAVDEPKHPFVAILGGAKVSDKIGVIDHLLNKADKVIIGGGMTYTFYAAKGMSIGNSLVEADKIDVAKEILAKG---GDKIVLPSDSIVAEKFDNDVPNKVVEGD-IPDGYMALDIGPKSVAEFKDVLKDAKTVVWNGPMGVFEMSNYANGTLEVGKFLGTLS--DATTIVGGGDSTAAVKQLGVGDQLTHISTGGGASLEYLEGKELPGIAAISN 399          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_TRIVI (Phosphoglycerate kinase OS=Trichoderma viride GN=pgk1 PE=3 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 3.180e-61
Identity = 119/224 (53.12%), Postives = 158/224 (70.54%), Query Frame = -3
Query:  180 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 845
            +KELDY   A+ +P++PF AI+GG+KVS KI +I++LL+KV+ L++ GGM FTF K   + ++G SL ++   +    L+EKAK+K V ++LPTD + ADKF  DAN+ +      IPDGWMGLD G ++IK + EA+D  KTI+WNGP GVFEF+KFA GT+A    + E    G   IIGGGD+     K G+ DK+SH+STGGGASLELLEGK LPGV AL
Sbjct:  191 KKELDYFAKALESPQRPFLAILGGAKVSDKIQLIDNLLDKVNTLIICGGMAFTFKKVLDNLAIGDSLFDKAGAETVPKLVEKAKAKNVKIVLPTDFITADKFDKDANTGLATDKDGIPDGWMGLDCGDESIKLYKEAIDEAKTILWNGPAGVFEFEKFAGGTKATLDAVVEGCKNGKIVIIGGGDTATVAAKYGVEDKLSHVSTGGGASLELLEGKELPGVTAL 414          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_KLULA (Phosphoglycerate kinase OS=Kluyveromyces lactis GN=PGK PE=3 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 3.180e-61
Identity = 120/225 (53.33%), Postives = 155/225 (68.89%), Query Frame = -3
Query:  174 KELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 842
            KEL Y   A+ NP +PF AI+GG+KV+ KI +I++LL+KVD L++GGGM FTF K  +   +G S+ +    +L   L+EKAK   V ++LPTD VI DKF+ADAN+KVV     IP GW GLD GP++ K+F+  +   KTI+WNGP GVFEF  FA GTEA+   +   S  G T IIGGGD+    +K G+ DK+SH+STGGGASLELLEGK LPGV  L +
Sbjct:  190 KELQYFAKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSLIIGGGMAFTFKKVLENTEIGDSIYDAAGAELVPKLVEKAKKNNVKIVLPTDFVIGDKFSADANTKVVTDKEGIPSGWQGLDNGPESRKAFAATVAEAKTIVWNGPPGVFEFAPFAKGTEALLDAVVASSQAGNTVIIGGGDTATVAKKYGVVDKISHVSTGGGASLELLEGKELPGVTFLSN 414          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK1_TRYCO (Phosphoglycerate kinase, cytosolic OS=Trypanosoma congolense GN=C1PGK PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.180e-61
Identity = 117/225 (52.00%), Postives = 159/225 (70.67%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ Y    + NP +P  AIVGGSKVS KI +++++L+++D LL+GG M +TF KAQGH +G+S+ EED+LDLA SL++KA+ + V +LLP D V   +F A     V     IPDG M LD+GP  I ++ E +   K+ IWNGPMGVFE   ++ GT A+AK + + + K G+ +IIGGGDS +A E+ G A +MSH+STGGGASLELLEGKTLPGV  LD+
Sbjct:  194 EKEISYFSKVLGNPPRPLVAIVGGSKVSDKIQLLDNMLQRIDYLLIGGAMAYTFLKAQGHRIGTSMCEEDRLDLARSLLKKAEDRKVQVLLPVDHVCHTEFKAVDTPVVTADADIPDGHMALDIGPKTIANYVETIGKCKSAIWNGPMGVFEMTPYSKGTFAVAKAMGDCTQKNGLMSIIGGGDSASAAEQSGEATRMSHVSTGGGASLELLEGKTLPGVAILDE 418          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_LACAC (Phosphoglycerate kinase OS=Lactobacillus acidophilus GN=pgk PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.424e-61
Identity = 122/224 (54.46%), Postives = 154/224 (68.75%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ YL  AV NP  PF  I+GG+KVS KIGVIE+L+ K D +L+GGGM +TF  AQGH +G SL E DK+DLA  L+EKA   G  ++LP D V A +F+ DA+ +VV    IPD  MGLD+GP  I  F + L   KT++WNGPMG FE   FA GT  + + LA L+    TTIIGGGDS AA +++G+A K+SHISTGGGASL  LEGK LPG+  + D
Sbjct:  185 EKEIKYLGDAVDNPVHPFVTILGGAKVSDKIGVIENLIPKSDHILIGGGMAYTFLAAQGHKIGKSLFEADKVDLAKELLEKA---GDKIVLPVDNVAATEFSNDASREVV-GDDIPDNMMGLDIGPKTIAKFKDILKDAKTVVWNGPMGAFEMPNFAEGTLEVGRALANLT--DATTIIGGGDSTAAAKQLGIAPKISHISTGGGASLNYLEGKVLPGIACVSD 402          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_ARCB4 (Phosphoglycerate kinase OS=Arcobacter butzleri (strain RM4018) GN=pgk PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.424e-61
Identity = 118/221 (53.39%), Postives = 154/221 (69.68%), Query Frame = -3
Query:  180 KELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 842
            KE+ +    + NPK+PF AIVGGSKVS K+  + +L+ KVD +++GGGM FTF KA+GH +G+SLVE+D +  A  +ME+AKSKGV L LP DVV A+ F A+A +K+     +P GWMGLD+GP +   FSEAL    TI+WNGPMGV+E D+FA G+  I+  +A       TT++GGGD+   V   G  D M+ ISTGGGASLEL+EGK LPGV AL
Sbjct:  177 KEIKFFHHIIHNPKRPFIAIVGGSKVSGKLEALYNLIPKVDKIIIGGGMAFTFLKARGHEIGNSLVEDDLIPEALKIMEEAKSKGVKLYLPVDVVAAEAFDAEAIAKIATIQEMPKGWMGLDIGPASALLFSEALSDANTILWNGPMGVYEMDRFAKGSTKISHAVA---NSYATTVVGGGDTADLVRVTGDEDDMTFISTGGGASLELIEGKVLPGVKAL 394          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_STRZT (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=pgk PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 7.084e-61
Identity = 124/224 (55.36%), Postives = 157/224 (70.09%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            + E+ Y+  AV  P++PF AI+GGSKVS KIGVIE+LLEK D +L+GGGM +TFYKAQG  +G+SLVEEDKLD+A +L+EKA  K   L+LP D   A+ FA     +     A+ +G++GLD+GP +I  F EAL   KT++WNGPMGVFE   F AGT  +    A +   GV +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  179 ENEIAYIQEAVETPERPFVAILGGSKVSDKIGVIENLLEKADKVLIGGGMTYTFYKAQGIEIGNSLVEEDKLDVAKALLEKANGK---LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDFQAGTIGVMD--AIVKQPGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTE 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_STRZP (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain P1031) GN=pgk PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 7.084e-61
Identity = 124/224 (55.36%), Postives = 157/224 (70.09%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            + E+ Y+  AV  P++PF AI+GGSKVS KIGVIE+LLEK D +L+GGGM +TFYKAQG  +G+SLVEEDKLD+A +L+EKA  K   L+LP D   A+ FA     +     A+ +G++GLD+GP +I  F EAL   KT++WNGPMGVFE   F AGT  +    A +   GV +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  179 ENEIAYIQEAVETPERPFVAILGGSKVSDKIGVIENLLEKADKVLIGGGMTYTFYKAQGIEIGNSLVEEDKLDVAKALLEKANGK---LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDFQAGTIGVMD--AIVKQPGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTE 397          
The following BLAST results are available for this feature:
BLAST of CX069913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_GEOLS1.864e-6153.36Phosphoglycerate kinase OS=Geobacter lovleyi (stra... [more]
PGK_BORHD1.864e-6149.78Phosphoglycerate kinase OS=Borrelia hermsii (strai... [more]
PGK_PEDPA2.435e-6152.23Phosphoglycerate kinase OS=Pediococcus pentosaceus... [more]
PGK_TRIVI3.180e-6153.13Phosphoglycerate kinase OS=Trichoderma viride GN=p... [more]
PGK_KLULA3.180e-6153.33Phosphoglycerate kinase OS=Kluyveromyces lactis GN... [more]
PGK1_TRYCO3.180e-6152.00Phosphoglycerate kinase, cytosolic OS=Trypanosoma ... [more]
PGK_LACAC5.424e-6154.46Phosphoglycerate kinase OS=Lactobacillus acidophil... [more]
PGK_ARCB45.424e-6153.39Phosphoglycerate kinase OS=Arcobacter butzleri (st... [more]
PGK_STRZT7.084e-6155.36Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRZP7.084e-6155.36Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F05-K9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069913 ID=CX069913; Name=CX069913; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAACACAC
CCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAACTTGT
CAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAGATTTG
GCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCAACAAG
GGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGATCATTC
CTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAATAACA
CCGATCTTAGTTGACACCTTTGAACCACCAACAATGGCAGCAAATGGTTT
CTTGGGATTTGAAACAGCTCCAACAAGATAATCTAGTTCCTTTTGCA
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