CX069913

Overview
NameCX069913
Unique NameCX069913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_ROSDO (Phosphoglycerate kinase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=pgk PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.138e-49
Identity = 104/226 (46.02%), Postives = 149/226 (65.93%), Query Frame = -3
Query:  180 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPA---TAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 845
            Q EL  L  A+S P++P  A+VGG+KVSTKI ++E+L+ ++D+L++GGGM  TF  AQG  +G+SL+E D ++ A ++M+ A+  G  LLLP D V+A +F A A+ +VV     T + +  M LD GP ++ +   A  T KT+IWNGP+G FE   F   T A A + A L+  G + ++ GGGD+VAA+ + G A   ++IST GGA LE +EGKTLPGV AL
Sbjct:  168 QAELSALEAALSTPQRPVGAVVGGAKVSTKIALLENLVARLDVLVIGGGMANTFLAAQGAKLGASLMEPDYMETARTIMQSAERAGCKLLLPVDGVVAREFKAGADFEVVALGKDTVLAEDQMVLDAGPQSVAAVMAAFRTLKTLIWNGPLGAFEITPFNQATNATALEAARLTKSGALISVAGGGDTVAALNQAGAAADFTYISTAGGAFLEWMEGKTLPGVAAL 393          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_PSESM (Phosphoglycerate kinase OS=Pseudomonas syringae pv. tomato GN=pgk PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.138e-49
Identity = 109/221 (49.32%), Postives = 145/221 (65.61%), Query Frame = -3
Query:  177 ELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 839
            EL+ L  A+  P +P AAIV GSKVSTK+ V+ SL    D L++GGG+  TF  A GH VG SL E D LD A ++  K     VS+ LPTDVV+A +FA  A + V     + D  M LD+GP     F+E L ++ TI+WNGP+GVFEFD+F  GT+ +AK +AE       +I GGGD++AA++K G+AD++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  170 ELEALGKALGAPAQPMAAIVAGSKVSTKLDVLNSLSAICDQLIVGGGIANTFLAAAGHKVGKSLYEPDLLDTARAIAAK-----VSVPLPTDVVVAKEFAESATATVKLIADVADDDMILDIGPQTAAHFAELLKSSGTILWNGPVGVFEFDQFGEGTKTLAKAIAE---SKAFSIAGGGDTLAAIDKYGVADQISYISTGGGAFLEFVEGKVLPAVEMLE 382          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_DIAST (Phosphoglycerate kinase OS=Diaphorobacter sp. (strain TPSY) GN=pgk PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.792e-49
Identity = 101/215 (46.98%), Postives = 147/215 (68.37%), Query Frame = -3
Query:  195 ELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLP 839
            E+D +  A++NPK+P  AIV GSKVSTK+ +++SL + VD L++GGG+  TF  A G  +G SL E D ++ A +++    ++G  + +PTDVV+A  FAADA + V  A+ + +  + LD+GP+     +  L    TI+WNGP+GVFEFD+FA GT+AIA+ +AE S     +I GGGD++AA+ K G+   + +ISTGGGA LE+LEGKTLP
Sbjct:  175 EIDAIQTALANPKRPLVAIVAGSKVSTKLTILQSLSKNVDGLVVGGGIANTFMLAAGLPIGKSLAEPDLVNEAKAVIAAMAARGAEVPIPTDVVVAKAFAADAPATVKKASEVAEDDLILDIGPETAAKLAAQLKAAGTIVWNGPVGVFEFDQFAGGTKAIAQAIAESS---AFSIAGGGDTLAAIAKYGIEKDVGYISTGGGAFLEVLEGKTLP 386          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_AERS4 (Phosphoglycerate kinase OS=Aeromonas salmonicida (strain A449) GN=pgk PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.792e-49
Identity = 103/221 (46.61%), Postives = 148/221 (66.97%), Query Frame = -3
Query:  177 ELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 839
            EL+ L  A+  P++P  AIVGGSKVSTK+ V+ESL +  D L++GGG+  TF  A GH+VG SL E D LD A  L  +      ++ + TDVV+  +F+    + +   + + DG M  D+GPD+ K+ ++ +   KTI+WNGP+GVFEFD+F+AGT+ IA+ +A        +I GGGD++AA++K G+ADK+S+ISTGGGA LE +EGK LP V  L+
Sbjct:  170 ELEALGKAMLKPERPMVAIVGGSKVSTKLTVLESLSKIADQLVVGGGIANTFIAAAGHNVGKSLCEHDLLDTAKKLAAET-----NIPVTTDVVVGTEFSESTPATIKSVSDVTDGDMIFDIGPDSAKALADIIMNAKTILWNGPVGVFEFDQFSAGTKVIAEAIA---ASPAFSIAGGGDTLAAIDKFGIADKVSYISTGGGAFLEFVEGKVLPAVAMLE 382          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_RHOFD (Phosphoglycerate kinase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=pgk PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.647e-49
Identity = 103/215 (47.91%), Postives = 144/215 (66.98%), Query Frame = -3
Query:  195 ELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLP 839
            E+D +  A++NPK+P  AIV GSKVSTK+ +++SL  KVD L++GGG+  TF  A G  +G SL E D L+ A +++   K++G ++ +PTDVV A  FAADA + V  AT + D  + LD+GP    + +  L    TI+WNGP+GVFEF  F  GT+ IA  +AE S     +I GGGD++AA+ K G+  ++ +ISTGGGA LE+LEGKTLP
Sbjct:  175 EMDAISKALANPKRPLVAIVAGSKVSTKLTILKSLASKVDQLIVGGGIANTFMLAAGLKIGKSLAEPDLLEDARAVIAAMKARGAAVPIPTDVVTAKTFAADAVATVKAATDVADDDLILDIGPQTAAALATQLKAAGTIVWNGPVGVFEFPAFENGTQTIAHAIAESS---AFSIAGGGDTLAAIAKYGIEKQIGYISTGGGAFLEVLEGKTLP 386          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_PSEA7 (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain PA7) GN=pgk PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.647e-49
Identity = 105/221 (47.51%), Postives = 143/221 (64.71%), Query Frame = -3
Query:  177 ELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 839
            ELD L  A+ NP +P AAIV GSKVSTK+ V+ SL    D L++GGG+  TF  A GH VG SL E D ++ A ++  K K     + LP DVV+A +FA  A + V     + D  M LD+GP     F++ L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  170 ELDALGKALGNPARPMAAIVAGSKVSTKLDVLNSLAGICDQLIVGGGIANTFLAAAGHKVGKSLYEADLVETAKAIAAKVK-----VPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFADLLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_ACIAC (Phosphoglycerate kinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.647e-49
Identity = 103/215 (47.91%), Postives = 144/215 (66.98%), Query Frame = -3
Query:  195 ELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLP 839
            E+D +  A+S P +P AAIV GSKVSTK+ +++SL +KVD L++GGG+  TF  A G S+G SL E D +  A +++E  K++G  + +PTDVV+A  F+ADA + V  AT + D  + LD+GP      +  L    TI+WNGP+GVFEF  F  GT+AIA+ +AE       +I GGGD++AA+ K G+   + +ISTGGGA LE+LEGKTLP
Sbjct:  175 EIDAIGKALSQPARPLAAIVAGSKVSTKLTILKSLSDKVDQLIVGGGIANTFMLAAGLSIGKSLAEPDLVSEAKAVIEAMKARGAEVPIPTDVVVAKTFSADAPATVKAATDVADDDLILDIGPQTAAKLAAQLKAAGTIVWNGPVGVFEFPAFENGTKAIAQAIAE---SPAFSIAGGGDTLAAIAKYGIEKDVGYISTGGGAFLEVLEGKTLP 386          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_MESSB (Phosphoglycerate kinase OS=Mesorhizobium sp. (strain BNC1) GN=pgk PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.763e-49
Identity = 101/223 (45.29%), Postives = 144/223 (64.57%), Query Frame = -3
Query:  180 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 845
            Q EL+ L   + +PK+P  AIVGG+KVSTKI ++ +L++KVD L++GGGM  TF  A+G SVG SL E D  + A  +M  A   G +++LP D V+A KF A A ++ V   A+P+  M LDVGP +++   E LD   T++WNGP+G FE   F   T  +AK  A  + +  + ++ GGGD+VAA+ +  ++D  S++ST GGA LE +EGK LPGV AL
Sbjct:  174 QAELEALQRGLGDPKRPVVAIVGGAKVSTKIDLLTNLVKKVDCLVIGGGMANTFLAARGTSVGKSLCEHDLRETAKQIMIDAAEAGCAIILPVDAVVARKFEAGAETETVDIDAVPEDAMILDVGPKSVEKVKEWLDRADTLVWNGPLGAFELSPFDKATMEVAKYAARRTRESLLVSVAGGGDTVAALNQADVSDDFSYVSTAGGAFLEWMEGKDLPGVAAL 396          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_AZOVD (Phosphoglycerate kinase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=pgk PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.763e-49
Identity = 104/222 (46.85%), Postives = 146/222 (65.77%), Query Frame = -3
Query:  174 ELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 839
            EL+ L  A+ NP++P AAIV GSKVSTK+ V+ SL +  D L++GGG+  TF  A G+ VG SL E D +D A ++  K     VS+ LP DVV+A  FA  A + V     + D  M LD+GP     F+E L +++TI+WNGP+GVFEFD+F  GT+ +A+ +A        +I GGGD++AA++K G+ +K+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  170 ELEALGKALDNPQRPMAAIVAGSKVSTKLDVLNSLSQVCDQLIVGGGIANTFLAAAGYKVGKSLYEADLVDTAKAIAAK-----VSVPLPVDVVVAKAFAESAEATVKAIDEVADDDMILDIGPQTAAQFAELLKSSRTILWNGPVGVFEFDQFGNGTKVLAEAIA---ASPAFSIAGGGDTLAAIDKYGVGEKISYISTGGGAFLEFVEGKVLPAVAVLEE 383          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_AZOC5 (Phosphoglycerate kinase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=pgk PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.763e-49
Identity = 104/223 (46.64%), Postives = 140/223 (62.78%), Query Frame = -3
Query:  180 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 845
            QKEL+ L  A+  P++P  A+VGG+KVS+K+ ++ +L  KVDIL++GGGM  TF  A+G  VG SL E D  D A  ++  A S G  ++LP D V+   FAA A+ +VVP   + +  M LD GP  +    E L   KT++WNGP G FE   F A T A+AK +AE +  G + ++ GGGD+VAA+   G A   S++ST GGA LE LEGK LPGV AL
Sbjct:  172 QKELEALAKALEAPQRPVLAVVGGAKVSSKLELLGNLTAKVDILVIGGGMANTFLAAKGVKVGKSLCEHDLADTARQIIATAASHGCEIVLPVDAVVTKTFAAHADHRVVPVDQVAEDEMILDAGPATVALVREKLKGAKTVVWNGPFGAFELPPFDAATVAVAKAVAEATKAGALLSVAGGGDTVAALNHAGAAGDFSYVSTAGGAFLEWLEGKQLPGVEAL 394          
The following BLAST results are available for this feature:
BLAST of CX069913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_ROSDO2.138e-4946.02Phosphoglycerate kinase OS=Roseobacter denitrifica... [more]
PGK_PSESM2.138e-4949.32Phosphoglycerate kinase OS=Pseudomonas syringae pv... [more]
PGK_DIAST2.792e-4946.98Phosphoglycerate kinase OS=Diaphorobacter sp. (str... [more]
PGK_AERS42.792e-4946.61Phosphoglycerate kinase OS=Aeromonas salmonicida (... [more]
PGK_RHOFD3.647e-4947.91Phosphoglycerate kinase OS=Rhodoferax ferrireducen... [more]
PGK_PSEA73.647e-4947.51Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_ACIAC3.647e-4947.91Phosphoglycerate kinase OS=Acidovorax avenae subsp... [more]
PGK_MESSB4.763e-4945.29Phosphoglycerate kinase OS=Mesorhizobium sp. (stra... [more]
PGK_AZOVD4.763e-4946.85Phosphoglycerate kinase OS=Azotobacter vinelandii ... [more]
PGK_AZOC54.763e-4946.64Phosphoglycerate kinase OS=Azorhizobium caulinodan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F05-K9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069913 ID=CX069913; Name=CX069913; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAACACAC
CCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAACTTGT
CAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAGATTTG
GCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCAACAAG
GGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGATCATTC
CTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAATAACA
CCGATCTTAGTTGACACCTTTGAACCACCAACAATGGCAGCAAATGGTTT
CTTGGGATTTGAAACAGCTCCAACAAGATAATCTAGTTCCTTTTGCA
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