CX069913

Overview
NameCX069913
Unique NameCX069913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_ROSCS (Phosphoglycerate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pgk PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.621e-73
Identity = 138/225 (61.33%), Postives = 171/225 (76.00%), Query Frame = -3
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            + EL  L GA+ NP +PF  I+GG+K+S KIGVIE+LL KVD LL+GGGM  TF  AQGH +G SLVE D   +A SL+++A  +GV L+LPTDVVIAD F+ADAN KVVP   IP GW  LD+GP+ I++++E +   +T+IWNGPMGVFE   FA GT AIA+ +A   G    TIIGGGDSVAA+E++GLADK+ HISTGGGASLELLEG+ LPGV AL+DA
Sbjct:  174 EAELAALQGALENPARPFVTIIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAQGHEMGDSLVEPDSAPIAKSLLDQAAQRGVRLMLPTDVVIADAFSADANRKVVPVGEIPPGWRALDIGPETIRAYTEVITGAQTVIWNGPMGVFELAPFAEGTRAIAQAMANCPG---MTIIGGGDSVAAIEQMGLADKIRHISTGGGASLELLEGRILPGVAALNDA 395          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_GEOKA (Phosphoglycerate kinase OS=Geobacillus kaustophilus GN=pgk PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.621e-73
Identity = 136/224 (60.71%), Postives = 171/224 (76.34%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KEL+ L  A+SNP +PF AI+GG+KV  KIGVI++LLEKVD L++GGG+ +TF KA GH VG SL+EEDK++LA S MEKAK KGV   +P DVV+AD+FA DAN+KVV   AIP  W  LD+GP   + + + +  +K ++WNGPMGVFE + FA GT+AIA+ LAE       ++IGGGDS AAVEK GLADKM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  172 EKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVAIDAIPSDWEALDIGPKTRELYRDVIRQSKLVVWNGPMGVFEMEAFAHGTKAIAEALAE--APDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALED 393          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOTE (Phosphoglycerate kinase OS=Clostridium tetani GN=pgk PE=3 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.054e-72
Identity = 135/224 (60.27%), Postives = 172/224 (76.79%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV NP++PF +I+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG+++GSSL+EEDK+D A  ++EKAK KGV LLLP D V A+KFA DA + +     I +G+MGLD+GP   K +S+ + + KT++WNGPMGVFEF+KFA GT  +AK +AE      TTIIGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  180 QKELKFLGNAVENPQRPFISILGGAKVSDKINVINNLLEKVDTLIIGGGMSYTFQKAQGYTIGSSLLEEDKIDYAKEMIEKAKEKGVKLLLPVDNVAAEKFAEDAEAIITEDQNIKEGYMGLDIGPKTSKLYSQEVQSAKTVVWNGPMGVFEFEKFAKGTIEVAKAMAE---SQATTIIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIAALND 400          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CHLTE (Phosphoglycerate kinase OS=Chlorobium tepidum GN=pgk PE=3 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.054e-72
Identity = 133/224 (59.38%), Postives = 179/224 (79.91%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KEL YL  A+++ ++PF AI+GG+K+S KI V+ESL EKVD +L+GG M+FTF+KAQG  VG+SLVEE+KL+LA SL+EKAK+K V LLLP DVV+A + +ADA S+V P +AI  G +GLD+GP  I+++ + +   KT++WNGPMGVFE D+FA GT A+A+ LA+ + +G  TIIGGGDS AA+ K GL+DK++H+STGGGASLE LEGK LPG+ AL+D
Sbjct:  174 EKELRYLGTALNDAQRPFVAILGGAKISGKIDVLESLFEKVDTVLVGGAMVFTFFKAQGLDVGNSLVEENKLELAVSLLEKAKAKNVRLLLPEDVVVAGEISADAPSRVEPVSAISAGMIGLDIGPATIETYRKEILDAKTVLWNGPMGVFEIDQFARGTFAVAQALADATAEGAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.054e-72
Identity = 134/224 (59.82%), Postives = 170/224 (75.89%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE++ L  A+SNP +PF AI+GG+KV  KIGVIE+LL+KVD L++GGG+ +TF KA GH +G SL+EEDK+DLA S MEKAK KGV+  +P D V+AD F+ DAN KVV    IP  W GLD+GP   + + + +  +K +IWNGPMGVFE D FA GT+A+A+ LA+   K   T+IGGGDS AAVEK GLA+KM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  172 EKEIEVLGKALSNPDRPFTAIIGGAKVKDKIGVIENLLDKVDNLIIGGGLAYTFVKALGHEIGKSLLEEDKIDLAKSFMEKAKEKGVNFYMPVDAVVADDFSNDANKKVVNIDEIPSDWEGLDIGPKTRELYRDVILKSKLVIWNGPMGVFEMDAFAEGTKAVAQALAD--AKDTYTVIGGGDSAAAVEKFGLANKMDHISTGGGASLEFMEGKQLPGVVALND 393          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_BACSK (Phosphoglycerate kinase OS=Bacillus clausii (strain KSM-K16) GN=pgk PE=3 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.066e-72
Identity = 133/224 (59.38%), Postives = 169/224 (75.45%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KELD L  A+SNP++PF A++GG+KV  KIGVI++LL+KVD L++GGG+ +TF KAQG+ VG SL+EEDKLDLA   MEKA+ KGV   +P DV++AD F+ DAN K V  + IP  W  LD+GP   K++   L  +K +IWNGPMGVFE + FA GT+A+A  LAE S     ++IGGGDS AAVE+ GLADKMSHISTGGGASLE +EGK LPGV+AL +
Sbjct:  172 EKELDVLGKALSNPERPFTAVIGGAKVKDKIGVIDNLLDKVDNLIIGGGLAYTFVKAQGYEVGKSLLEEDKLDLAKQFMEKAEQKGVKFYMPEDVIVADDFSDDANKKEVAISGIPADWEALDIGPKTRKTYEAVLKASKLVIWNGPMGVFELESFAGGTKAVANALAEAS--DTYSVIGGGDSAAAVEQFGLADKMSHISTGGGASLEFMEGKELPGVVALSE 393          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_GEOSW (Phosphoglycerate kinase OS=Geobacillus sp. (strain WCH70) GN=pgk PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.004e-72
Identity = 132/224 (58.93%), Postives = 171/224 (76.34%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE++ L  A+SNP +PF AI+GG+KV  KIGVIE+LL KVD L++GGG+ +TF KA GH +G SL+EEDK++LA S MEKAK KGV+  +P DVV+AD+FA DAN+KVV   AIP  W  LD+GP   + + + +  +K ++WNGPMGVFE D FA GT+A+A+ LA+       ++IGGGDS AAVEK GLA+KM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  172 EKEIEVLGKALSNPDRPFTAIIGGAKVKDKIGVIENLLNKVDNLIIGGGLAYTFVKALGHEIGKSLLEEDKIELAKSFMEKAKEKGVNFYMPVDVVVADRFANDANTKVVSIDAIPSDWEALDIGPKTRELYRDVIMKSKLVVWNGPMGVFEMDAFAEGTKAVAQALAD--AVDTYSVIGGGDSAAAVEKFGLAEKMDHISTGGGASLEFMEGKQLPGVVALND 393          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CHLP8 (Phosphoglycerate kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=pgk PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.004e-72
Identity = 131/224 (58.48%), Postives = 177/224 (79.02%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KEL YL  A+++ K+PF AI+GG+K+S KI V+E L +KVD +L+GG M+FTF+KAQG  VG+SLVE++K++LA SL+EKAK KGV L+LP DVV+A + +ADA S+V P T I DG  GLD+GP  I+++++ +   KT++WNGPMGVFE D+FA GT A+A+ LA+ +  G  TIIGGGDS AA+ K GL+DK++H+STGGGASLE LEGK LPG+ AL+D
Sbjct:  174 EKELRYLGTALNDAKRPFVAILGGAKISGKIDVLEHLFDKVDTVLVGGAMVFTFFKAQGLPVGNSLVEDNKIELAISLLEKAKEKGVRLILPEDVVVAAEISADAASRVEPVTTISDGMSGLDIGPATIETYAKEILGAKTVLWNGPMGVFEIDQFAKGTFAVAQALADATDAGAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_BACME (Phosphoglycerate kinase OS=Bacillus megaterium GN=pgk PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 6.829e-72
Identity = 135/224 (60.27%), Postives = 170/224 (75.89%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KELD L  A+SNP++PF AIVGG+KV  KIGVI+ LL+KVD L++GGG+ +TF KA GH VG SL+EEDK++LA S MEKAK  GV+  +P DVV+AD F+ DAN +VV    IP  W GLD GP   + +++ +  +K +IWNGPMGVFE D FA GT+A+A+ LAE +     ++IGGGDS AAVEK  LADKMSHISTGGGASLE +EGK LPGV+AL+D
Sbjct:  172 EKELDVLSKALSNPERPFTAIVGGAKVKDKIGVIDHLLDKVDNLIIGGGLSYTFIKALGHEVGKSLLEEDKIELAKSFMEKAKKNGVNFYMPVDVVVADDFSNDANIQVVSIEDIPSDWEGLDAGPKTREIYADVIKNSKLVIWNGPMGVFELDAFANGTKAVAEALAEAT--DTYSVIGGGDSAAAVEKFNLADKMSHISTGGGASLEFMEGKELPGVVALND 393          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_ROSS1 (Phosphoglycerate kinase OS=Roseiflexus sp. (strain RS-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 8.920e-72
Identity = 136/225 (60.44%), Postives = 171/225 (76.00%), Query Frame = -3
Query:  171 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 845
            + EL  L GA+ NP +PF  I+GG+K+S KIGVIE+LL KVD LL+GGGM  TF  AQG+ +G SLVE D + +A  L+EKA S+GV  +LPTDVVIAD F+ADAN +VV    IP GW  LD+GP+ +++++E + T +T+IWNGPMGVFE   FA GT AIA+ +A   G    TI+GGGDSVAAVE++GLADK+ HISTGGGASLELLEG+ LPGV AL+DA
Sbjct:  174 EAELAALQGALENPTRPFVTIIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAQGYEMGDSLVEPDSVPVAKDLLEKAASRGVRFMLPTDVVIADAFSADANRRVVSVGDIPPGWRVLDIGPETVRAYTEIITTAQTVIWNGPMGVFELAPFAEGTRAIAQAMANCPG---MTIVGGGDSVAAVEQMGLADKIRHISTGGGASLELLEGRILPGVAALNDA 395          
The following BLAST results are available for this feature:
BLAST of CX069913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_ROSCS3.621e-7361.33Phosphoglycerate kinase OS=Roseiflexus castenholzi... [more]
PGK_GEOKA3.621e-7360.71Phosphoglycerate kinase OS=Geobacillus kaustophilu... [more]
PGK_CLOTE1.054e-7260.27Phosphoglycerate kinase OS=Clostridium tetani GN=p... [more]
PGK_CHLTE1.054e-7259.38Phosphoglycerate kinase OS=Chlorobium tepidum GN=p... [more]
PGK_ANOFW1.054e-7259.82Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK_BACSK3.066e-7259.38Phosphoglycerate kinase OS=Bacillus clausii (strai... [more]
PGK_GEOSW4.004e-7258.93Phosphoglycerate kinase OS=Geobacillus sp. (strain... [more]
PGK_CHLP84.004e-7258.48Phosphoglycerate kinase OS=Chlorobaculum parvum (s... [more]
PGK_BACME6.829e-7260.27Phosphoglycerate kinase OS=Bacillus megaterium GN=... [more]
PGK_ROSS18.920e-7260.44Phosphoglycerate kinase OS=Roseiflexus sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F05-K9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069913 ID=CX069913; Name=CX069913; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAACACAC
CCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAACTTGT
CAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAGATTTG
GCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCAACAAG
GGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGATCATTC
CTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAATAACA
CCGATCTTAGTTGACACCTTTGAACCACCAACAATGGCAGCAAATGGTTT
CTTGGGATTTGAAACAGCTCCAACAAGATAATCTAGTTCCTTTTGCA
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