CX069913

Overview
NameCX069913
Unique NameCX069913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_DEIRA (Phosphoglycerate kinase OS=Deinococcus radiodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 8.920e-72
Identity = 136/222 (61.26%), Postives = 171/222 (77.03%), Query Frame = -3
Query:  180 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 845
            Q E+D L   +  P+ P+  I+GG+KVS KI VIE+LL KVD +L+GGGM+FTF KA+G  +G+SLVE+D+LDLA  L+EK   K   LLLPTD V ADKFAADA SKVVPA  IPDGWMGLD+GPD  +++++AL   KT+ WNGPMGVFEFD+FAAGT A+A  +  L  +   T++GGGDSV+A+ K G AD++ HISTGGGASLELLEGK LPGV+A+
Sbjct:  193 QSEVDALGKLLHAPEHPYVVIIGGAKVSDKIKVIENLLPKVDRMLIGGGMMFTFIKARGGQIGNSLVEDDQLDLAKGLLEKYGDK---LLLPTDAVAADKFAADAQSKVVPADQIPDGWMGLDIGPDTQRAYADALQGAKTVFWNGPMGVFEFDQFAAGTNAVAAAVGSLKDQAY-TVVGGGDSVSAINKSGKADQIDHISTGGGASLELLEGKELPGVVAM 410          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_BACHD (Phosphoglycerate kinase OS=Bacillus halodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 8.920e-72
Identity = 130/224 (58.04%), Postives = 171/224 (76.34%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KEL+ L  A+SNP++PF AI+GG+KV  KIGVIE+LL+KVD L++GGG+ +TF KAQGH +G SL+E DK+DLA S MEKAK KGV+  +P D ++AD F+ DAN+K V    IP  W  LD+GP   +++   + ++K +IWNGPMGVFE D FA GT+A+A+ LA+       ++IGGGDS AAVEK GLA++MSHISTGGGASLE +EGK LPGV+AL+D
Sbjct:  172 EKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIENLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEADKMDLALSFMEKAKEKGVNFYVPQDAIVADDFSNDANTKAVDIDQIPADWEALDIGPKTRETYRNVIQSSKLVIWNGPMGVFELDAFAGGTKAVAEALAD--ANDTYSVIGGGDSAAAVEKFGLANQMSHISTGGGASLEFMEGKALPGVVALND 393          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_BACSU (Phosphoglycerate kinase OS=Bacillus subtilis GN=pgk PE=1 SV=3)

HSP 1 Score: 269.24 bits (687), Expect = 1.987e-71
Identity = 132/224 (58.93%), Postives = 172/224 (76.79%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KELD L  AVSNP +PF AI+GG+KV  KIGVIESLL+KVD L++GGG+ +TF KA G+ VG SL+EEDK++LA S M++AK KGV+  +P DV++AD F+ DAN K+VP + IP     +D+G    +++++ +  +K ++WNGPMGVFE D FA GT+A+A+ LAE   K   ++IGGGDS AAVEK GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  172 EKELDVLGKAVSNPDRPFTAIIGGAKVKDKIGVIESLLDKVDNLIIGGGLAYTFVKALGYEVGKSLLEEDKIELAKSFMDRAKEKGVNFYMPEDVLVADDFSNDANVKIVPISEIPSDLEAIDIGTKTRETYADVIKNSKLVVWNGPMGVFEIDLFAQGTKAVAEALAE--AKDTYSVIGGGDSAAAVEKFGLADKMSHISTGGGASLEFMEGKELPGVAALND 393          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_PROA2 (Phosphoglycerate kinase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=pgk PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.389e-71
Identity = 130/224 (58.04%), Postives = 171/224 (76.34%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KEL YL  A++NP++PF AI+GG+K+S KI V+++L +KVD +L+GG MIFTF+KAQG+ VG+SLVEEDK++LA  L+EKA +K + +LLP DV+ A  F+ADA +  VP  +IP+  MGLD+GP  I ++S  +   +TI+WNGPMGVFE D FA GT AIA  LA+ + KG  +IIGGGDS AAV K GL   ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  174 EKELRYLGNALANPERPFLAILGGAKISGKIDVLDNLFDKVDTILIGGAMIFTFFKAQGYQVGTSLVEEDKIELAKHLLEKAAAKNIRMLLPEDVIAASAFSADAETATVPIDSIPETMMGLDIGPKTIDTYSREILKARTIVWNGPMGVFEIDAFATGTIAIAHALADATAKGAISIIGGGDSAAAVMKAGLESGITHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CHLL2 (Phosphoglycerate kinase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=pgk PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 7.551e-71
Identity = 129/224 (57.59%), Postives = 172/224 (76.79%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KEL YL  A+  P++PF AI+GGSK+S KI V+E+L  KVD +L+GG M+FTF+KAQG   G+SLVEE+KL+LA SL+E+A  K + LLLP D++IA + +ADA S  V   AIPDG +G+D+GP+   ++ + +   +T++WNGPMGVFE D+FA GT AIA+ +A+ +  G TTIIGGGDS AAV K GLAD+++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  174 EKELMYLGKALQEPERPFVAILGGSKISGKIDVLENLFNKVDTVLIGGAMVFTFFKAQGLGTGNSLVEENKLELALSLIEQAARKNIKLLLPQDIIIAPEISADAESMAVAVNAIPDGMIGVDIGPETRAAYRQEILGARTVLWNGPMGVFEIDRFAEGTIAIAEAMADATAAGATTIIGGGDSAAAVAKAGLADQITHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_MOOTA (Phosphoglycerate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=pgk PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.288e-70
Identity = 129/224 (57.59%), Postives = 175/224 (78.12%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKE++ L  A+++P++PF AI+GG+KVS KI VI +LL KVD L++GGGM  TF KAQG+++G SLVEED++ LA  L++ A  KGV +LLP D+V+A +F ADA  +VV   A+PDGWM LD+GP+  ++++ AL+  +T++WNGPMGVFE + FA GTEA+A+ +A + G    TI+GGGDSVAAVEK+G+A K+ HISTGGGASLE LEGK LPGV+AL +
Sbjct:  172 QKEIETLGKALADPERPFVAIIGGAKVSDKISVIRNLLTKVDTLIIGGGMANTFLKAQGYAMGKSLVEEDQVPLAQELIQLAAQKGVKMLLPRDLVVAQEFKADAPHQVVAVNAVPDGWMALDIGPETARAYAGALEGARTVVWNGPMGVFEMEAFAHGTEAVARAVAAVDG---MTIVGGGDSVAAVEKMGVAGKIGHISTGGGASLEFLEGKALPGVVALTE 392          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOD6 (Phosphoglycerate kinase OS=Clostridium difficile (strain 630) GN=pgk PE=3 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.197e-70
Identity = 131/224 (58.48%), Postives = 172/224 (76.79%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV+NP +PF AI+GG+KVS K+ VI  LLEKVD L++GGGM +TF KAQG+ VG+SL+E DK++ A  +MEKAK+KGV+LLLP DVV+AD FA DA   V     + + +MGLD+GP  I +F + +  +KT++WNGPMGVFEF+ FA GT ++A+ +AEL+    TT+IGGGDS AAV ++G  DKM+H+STGGGASLE LEGK LPG+ ALD+
Sbjct:  178 QKELKFLGEAVANPVRPFTAILGGAKVSDKLAVINELLEKVDNLIIGGGMAYTFLKAQGYEVGTSLLEIDKVEYAKEMMEKAKNKGVNLLLPVDVVMADHFAPDATPIVTEDANVKEDYMGLDMGPKTIANFVKTIKESKTVVWNGPMGVFEFENFANGTLSVARAMAELT--DATTVIGGGDSAAAVNQLGFGDKMTHVSTGGGASLEFLEGKELPGIAALDN 399          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOAB (Phosphoglycerate kinase OS=Clostridium acetobutylicum GN=pgk PE=3 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.197e-70
Identity = 128/224 (57.14%), Postives = 170/224 (75.89%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV NP +PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG+++G+SL+E DK+D A  ++EKA++KGV LLLP D ++  +F AD  +       IP+G+MGLD+GP   K +++A+   KT++WNGPMGVFEF+ FA GT+ +AK +AE      TT+IGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG++AL+D
Sbjct:  176 QKELKFLGSAVENPVRPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTIGTSLLEADKVDYAKEMIEKAEAKGVKLLLPIDNIVGAEFKADTKAVTTEDANIPEGYMGLDIGPKTQKLYADAVKEAKTVVWNGPMGVFEFENFAKGTKDVAKAMAE---SDATTVIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIVALND 396          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CHLPB (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain BS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.197e-70
Identity = 128/224 (57.14%), Postives = 170/224 (75.89%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KEL YL  A++NP++PF AI+GG+K+S KI V+E+L  KVD +L+GG MIFTF+KAQG SVG SLVE+DK++LA  L++ AK + +++LLP DV+ A +F+ DA +  VP   IP+  MGLD+GP  I +FS  +   KT++WNGPMGVFE + FA GT AIA+ LA+ + KG  +I+GGGDS AAV K GLA  ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  174 EKELKYLGQALNNPERPFVAILGGAKISGKIDVLENLFNKVDTVLIGGAMIFTFFKAQGLSVGKSLVEDDKVELARHLLQTAKERKINMLLPEDVIAASEFSGDAETMAVPVGGIPENMMGLDIGPKTIDTFSREILAAKTVVWNGPMGVFEIEPFAKGTIAIAQALADATAKGTISIVGGGDSAAAVMKAGLASGITHISTGGGASLEFLEGKELPGITALND 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGKT_THEMA (Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk/tpi PE=1 SV=4)

HSP 1 Score: 264.618 bits (675), Expect = 4.894e-70
Identity = 128/225 (56.89%), Postives = 162/225 (72.00%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ +L     NP+KP+  ++GG+KVS KIGVI +L+EK D +L+GG M+FTF KA G  VGSS VEEDK+DLA  L+EKAK KGV ++LP D VIA K       KVV     IP+GWMGLD+GP+ I+ F + L   KT++WNGPMGVFE D FA GT+ +A  +A L+ KG  T++GGGDS AAV K GL DK SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  172 EKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAKELLEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPGIASIAD 396          
The following BLAST results are available for this feature:
BLAST of CX069913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_DEIRA8.920e-7261.26Phosphoglycerate kinase OS=Deinococcus radiodurans... [more]
PGK_BACHD8.920e-7258.04Phosphoglycerate kinase OS=Bacillus halodurans GN=... [more]
PGK_BACSU1.987e-7158.93Phosphoglycerate kinase OS=Bacillus subtilis GN=pg... [more]
PGK_PROA23.389e-7158.04Phosphoglycerate kinase OS=Prosthecochloris aestua... [more]
PGK_CHLL27.551e-7157.59Phosphoglycerate kinase OS=Chlorobium limicola (st... [more]
PGK_MOOTA1.288e-7057.59Phosphoglycerate kinase OS=Moorella thermoacetica ... [more]
PGK_CLOD62.197e-7058.48Phosphoglycerate kinase OS=Clostridium difficile (... [more]
PGK_CLOAB2.197e-7057.14Phosphoglycerate kinase OS=Clostridium acetobutyli... [more]
PGK_CHLPB2.197e-7057.14Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGKT_THEMA4.894e-7056.89Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F05-K9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069913 ID=CX069913; Name=CX069913; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAACACAC
CCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAACTTGT
CAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAGATTTG
GCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCAACAAG
GGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGATCATTC
CTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAATAACA
CCGATCTTAGTTGACACCTTTGAACCACCAACAATGGCAGCAAATGGTTT
CTTGGGATTTGAAACAGCTCCAACAAGATAATCTAGTTCCTTTTGCA
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