CX069913

Overview
NameCX069913
Unique NameCX069913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_THESQ (Phosphoglycerate kinase OS=Thermotoga sp. (strain RQ2) GN=pgk PE=3 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 6.392e-70
Identity = 127/225 (56.44%), Postives = 162/225 (72.00%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ +L     NP+KP+  ++GG+KVS KIGVI +L+EK D +L+GG M+FTF KA G  VGSS VEEDK+DLA  L+EKAK KGV ++LP D VIA K       KVV     IP+GWMGLD+GP+ ++ F + L   KT++WNGPMGVFE D FA GT+ +A  +A L+ KG  T++GGGDS AAV K GL DK SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  172 EKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAKELLEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETVELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLONN (Phosphoglycerate kinase OS=Clostridium novyi (strain NT) GN=pgk PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.090e-69
Identity = 130/224 (58.04%), Postives = 167/224 (74.55%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV  P +PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG+++G SLVEEDK++ A  +M+KAK+KGV LLLP D V+ ++F A+          IP+G+MGLD+GP     +++A+ T KT++WNGPMGVFEF  FA GT A+A+ +AE      TTIIGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG++AL D
Sbjct:  177 QKELKFLGDAVETPVRPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTIGKSLVEEDKVEYAKEMMDKAKAKGVKLLLPVDNVVGEEFDANTTPVTTEDANIPEGYMGLDIGPKTSALYADAVRTAKTVVWNGPMGVFEFANFAKGTIAVAEAMAEAD---ATTIIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIVALSD 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_THEP1 (Phosphoglycerate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pgk PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.424e-69
Identity = 126/225 (56.00%), Postives = 162/225 (72.00%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KE+ +L     NP+KP+  ++GG+KVS KIGVI +L+EK D +L+GG M+FTF KA G  VGSS VEEDK+DLA  L+EKAK KGV ++LP D VIA K       KVV     IP+GWMGLD+GP+ ++ F + L   KT++WNGPMGVFE D FA GT+ +A  +A L+ KG  T++GGGDS AAV K GL D+ SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  172 EKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAKELLEKAKEKGVEIVLPVDTVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETVELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDRFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CHLPD (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=pgk PE=3 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.860e-69
Identity = 125/224 (55.80%), Postives = 172/224 (76.79%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            +KEL+YL  A+ NP++PF AI+GGSK+S KI V+E+L  KVD +L+GG M+FTF+KAQG +VG+SLVE++KLDLA +L+++A  KG++LLLP DV++A   ++DA+S V    ++ DG +G+D+GP  I+ +   +   +T++WNGPMGVFE D FA GT AIAK LAE +  G  TI+GGGDS AA+ K  L+D ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  174 EKELNYLGKALDNPERPFVAILGGSKISGKIDVLENLFTKVDTVLIGGAMVFTFFKAQGLNVGNSLVEDNKLDLAQALLKQAADKGINLLLPDDVLVAATISSDASSHVEAVNSMSDGMIGVDIGPKTIEKYRNEILAARTVLWNGPMGVFEIDNFAEGTFAIAKALAEATSSGAITIVGGGDSAAAIAKAALSDSITHISTGGGASLEFLEGKALPGIEALND 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CHLCH (Phosphoglycerate kinase OS=Chlorobium chlorochromatii (strain CaD3) GN=pgk PE=3 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.860e-69
Identity = 122/224 (54.46%), Postives = 172/224 (76.79%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            ++EL YL  A+  P++PF AI+GGSK+S KI V+E+L +KVD +L+GG M+FTF+KAQG+ VG SLVEE K++LA S++E+AK+KG+ LLLPTDVV+  + +ADA S V     +P+  +G+D+GP+   ++   +   +T++WNGPMGVFE D FA GT A+A+ LA+ + +G TTI+GGGDS AA+ K GLA +++HISTGGGASLE LEGK LPG+ AL++
Sbjct:  174 ERELRYLGKALQEPERPFVAILGGSKISGKIDVLENLFKKVDTVLIGGAMVFTFFKAQGYEVGKSLVEESKIELALSILEQAKAKGIKLLLPTDVVVTAEISADAESSVASIADMPNNLIGVDIGPETAAAYRNEIIGARTVLWNGPMGVFELDNFATGTIAVAQALADATAQGATTIVGGGDSAAAIAKAGLASEITHISTGGGASLEFLEGKELPGIAALNN 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOBL (Phosphoglycerate kinase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pgk PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.172e-69
Identity = 130/224 (58.04%), Postives = 169/224 (75.45%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++ +  +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  177 QKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOBK (Phosphoglycerate kinase OS=Clostridium botulinum (strain Okra / Type B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.172e-69
Identity = 130/224 (58.04%), Postives = 169/224 (75.45%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++ +  +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  177 QKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOBJ (Phosphoglycerate kinase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=pgk PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.172e-69
Identity = 130/224 (58.04%), Postives = 169/224 (75.45%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++ +  +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  177 QKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOBH (Phosphoglycerate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.143e-69
Identity = 129/224 (57.59%), Postives = 169/224 (75.45%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++ +  +++KAK KGV+LLLP D V+ADKF  DA+  +     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  177 QKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVITEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069913 vs. ExPASy Swiss-Prot
Match: PGK_CLOB1 (Phosphoglycerate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.143e-69
Identity = 129/224 (57.59%), Postives = 169/224 (75.45%), Query Frame = -3
Query:  174 QKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 845
            QKEL +L  AV  P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++ +  +++KAK KGV+LLLP D V+ADKF  DA+  +     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  177 QKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVITEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397          
The following BLAST results are available for this feature:
BLAST of CX069913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_THESQ6.392e-7056.44Phosphoglycerate kinase OS=Thermotoga sp. (strain ... [more]
PGK_CLONN1.090e-6958.04Phosphoglycerate kinase OS=Clostridium novyi (stra... [more]
PGK_THEP11.424e-6956.00Phosphoglycerate kinase OS=Thermotoga petrophila (... [more]
PGK_CHLPD1.860e-6955.80Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGK_CHLCH1.860e-6954.46Phosphoglycerate kinase OS=Chlorobium chlorochroma... [more]
PGK_CLOBL3.172e-6958.04Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBK3.172e-6958.04Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBJ3.172e-6958.04Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBH4.143e-6957.59Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOB14.143e-6957.59Phosphoglycerate kinase OS=Clostridium botulinum (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_13F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F05-K9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069913 ID=CX069913; Name=CX069913; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAACACAC
CCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAACTTGT
CAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAGATTTG
GCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCAACAAG
GGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGATCATTC
CTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAATAACA
CCGATCTTAGTTGACACCTTTGAACCACCAACAATGGCAGCAAATGGTTT
CTTGGGATTTGAAACAGCTCCAACAAGATAATCTAGTTCCTTTTGCA
back to top