CX069908

Overview
NameCX069908
Unique NameCX069908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL4_ARATH (4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.452e-34
Identity = 75/162 (46.30%), Postives = 107/162 (66.05%), Query Frame = 1
Query:    4 THIWVVPPLILALAKHG-LVK-KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            T + + PP+++A+     L+K K+DLSSLK V  G APL KE+ E   +  P+  ++QGY LTE++G     NS   SR  G+AG L   VEA IV  +T + +  NQ GE+WL+GP++ +GY+ N++AT  TI+ +GW+ TGDL Y D DG L+VVDR+KE
Sbjct:  287 TALALAPPVLVAMINDADLIKAKYDLSSLKTVRCGGAPLSKEVTEGFLEKYPTVDILQGYALTESNGGGAFTNSAEESRRYGTAGTLTSDVEARIVDPNTGRFMGINQTGELWLKGPSISKGYFKNQEATNETINLEGWLKTGDLCYIDEDGFLFVVDRLKE 448          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.452e-34
Identity = 74/158 (46.84%), Postives = 102/158 (64.56%), Query Frame = 1
Query:   19 VPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSR---NIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VPP++LA+AK  +V  +DLSS++ V SGAAPLGKEL +      P+A + QGYG+TE   +  M  +FA        G+ G +    E  IV   T   LP NQ GEI +RG  +M+GY N+ +AT  TIDK+GW++TGD+GY D D +L++VDR+KE
Sbjct:  281 VPPIVLAIAKSPMVDDYDLSSVRTVMSGAAPLGKELEDTVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPKTGNSLPRNQSGEICIRGDQIMKGYLNDPEATARTIDKEGWLYTGDIGYIDDDDELFIVDRLKE 438          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL6_ORYSJ (4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.589e-33
Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 1
Query:    1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VT +   PP+++AL K    ++ DLSSL  +  G APLG+E+ +  A   PS  ++Q YGLTE++G +ATM      S   GS G LAP V+A IV   T + L P + GE+W+RGP +M+GY  + +AT  TI   GW+ TGDL YF+ DG LYVVDR+KE
Sbjct:  333 VTKLSAAPPVVVALTKSDEARRRDLSSLVAIVVGGAPLGREVSQRFATVFPSVQIVQSYGLTESTGPVATMAGP-EESAAYGSVGRLAPRVQAKIVDTATGEVLGPGRRGELWIRGPVVMKGYVGDPEATAATITPDGWLKTGDLCYFNEDGYLYVVDRLKE 493          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 2.710e-33
Identity = 69/162 (42.59%), Postives = 103/162 (63.58%), Query Frame = 1
Query:    1 VTHIWVVPPLILALAKHGL-VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            +TH  VVPP+++AL K    V      SLK V SGAAPL ++ +E+  + +P   +IQGYG+TE++ + T   +        S G LAP ++A +V   +   LPP   GE+W++GP +M+GY NN +AT+++I +  W+ TGD+ YFD DG L++VDRIKE
Sbjct:  299 ITHFPVVPPMLMALTKKAKGVCGEVFKSLKQVSSGAAPLSRKFIEDFLQTLPHVDLIQGYGMTESTAVGTRGFNSEKLSRYSSVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKE 460          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL3_ARATH (4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana GN=4CLL3 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 7.886e-33
Identity = 70/162 (43.21%), Postives = 102/162 (62.96%), Query Frame = 1
Query:    4 THIWVVPPLILALAKHG--LVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            T + + PP+++A+      L  K+DL+SL+ V  G APL KE+M+   +  P+  + QGY LTE+ G      S   S   G+ G L+ G+EA IV  DT + +  NQ GE+WL+GP++ +GY+ NE+AT  TI+ +GW+  GDL Y D DG L+VVDR+KE
Sbjct:  289 TILSLAPPVLVAMINGADQLKAKYDLTSLRKVRCGGAPLSKEVMDSFLEKYPTVNIFQGYALTESHGSGASTESVEESLKYGAVGLLSSGIEARIVDPDTGRVMGVNQPGELWLKGPSISKGYFGNEEATNETINLEGWLKLGDLCYIDEDGFLFVVDRLKE 450          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CL4_ORYSJ (Probable 4-coumarate--CoA ligase 4 OS=Oryza sativa subsp. japonica GN=4CL4 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.030e-32
Identity = 70/158 (44.30%), Postives = 101/158 (63.92%), Query Frame = 1
Query:   19 VPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSR---NIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VPP+++ +AK   V   DL+S+++V SGAAP+GK+L +     +P+A + QGYG+TE   +  M  +FA        GS G +    E  IV  DT   L  NQ GEI +RG  +M+GY N+ ++TK TIDK GW+HTGD+GY D D ++++VDR+KE
Sbjct:  290 VPPIVVEIAKSPRVTADDLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTGATLGRNQSGEICIRGEQIMKGYLNDPESTKNTIDKGGWLHTGDIGYVDDDDEIFIVDRLKE 447          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CL1_ORYSJ (Probable 4-coumarate--CoA ligase 1 OS=Oryza sativa subsp. japonica GN=4CL1 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 2.295e-32
Identity = 71/164 (43.29%), Postives = 104/164 (63.41%), Query Frame = 1
Query:    1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSR---NIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VT   +VPP+++A+AK       DLSS+++V SGAAP+GK++ +     +P A + QGYG+TE   + +M  +FA        G+ G +    E  I+  DT K L  N  GEI +RG  +M+GY NN +ATK TID +GW+HTGD+GY D D ++++VDR+KE
Sbjct:  295 VTIAPLVPPIVVAVAKSEAAAARDLSSVRMVLSGAAPMGKDIEDAFMAKLPGAVLGQGYGMTEAGPVLSMCLAFAKEPFKVKSGACGTVVRNAELKIIDPDTGKSLGRNLPGEICIRGQQIMKGYLNNPEATKNTIDAEGWLHTGDIGYVDDDDEIFIVDRLKE 458          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CL3_ORYSJ (Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica GN=4CL3 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.997e-32
Identity = 69/158 (43.67%), Postives = 101/158 (63.92%), Query Frame = 1
Query:   19 VPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSR---NIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VPP+++ +AK   V   DL+S+++V SGAAP+GK+L +     +P+A + QGYG+TE   +  M  +FA        GS G +    E  IV  DT   L  NQ GEI +RG  +M+GY N+ +ATK TID+ GW+HTGD+G+ D D ++++VDR+KE
Sbjct:  280 VPPIVVEIAKSPRVTAEDLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFKVKSGSCGTVVRNAELKIVDPDTGTSLGRNQSGEICIRGEQIMKGYLNDPEATKNTIDEDGWLHTGDIGFVDDDDEIFIVDRLKE 437          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LUCI_LUCCR (Luciferin 4-monooxygenase OS=Luciola cruciata PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.914e-32
Identity = 71/161 (44.10%), Postives = 104/161 (64.60%), Query Frame = 1
Query:    4 THIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSG--IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIK 480
            T + +VP L   L K  L+ K+DLS+L  + SG APL KE+ E  A+      V QGYGLTET+   I T E    G    G++G + P  +A ++ +DT+K L PN+ GE+ ++GP +M+GY NN +ATK  ID++GW+HTGD+GY+D +   ++VDR+K
Sbjct:  285 TSVILVPTLFAILNKSELLNKYDLSNLVEIASGGAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAIIITPE----GDDKPGASGKVVPLFKAKVIDLDTKKSLGPNRRGEVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLK 441          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LUCI_LUCMI (Luciferin 4-monooxygenase OS=Luciola mingrelica PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 5.112e-32
Identity = 72/161 (44.72%), Postives = 103/161 (63.98%), Query Frame = 1
Query:    4 THIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSG--IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIK 480
            T + +VP L   L K  L+ KFDLS+L  + SG APL KE+ E  A+      V QGYGLTET+   I T E    G    G++G + P  +  ++ +DT+K L  N+ GEI ++GP++M GY NN +AT+ TID++GW+HTGD+GY+D D   ++VDR+K
Sbjct:  285 TSVILVPTLFAILNKSELIDKFDLSNLTEIASGGAPLAKEVGEAVARRFNLPGVRQGYGLTETTSAFIITPE----GDDKPGASGKVVPLFKVKVIDLDTKKTLGVNRRGEICVKGPSLMLGYSNNPEATRETIDEEGWLHTGDIGYYDEDEHFFIVDRLK 441          
The following BLAST results are available for this feature:
BLAST of CX069908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
4CLL4_ARATH2.452e-3446.304-coumarate--CoA ligase-like 4 OS=Arabidopsis thal... [more]
4CL2_TOBAC2.452e-3446.844-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=... [more]
4CLL6_ORYSJ1.589e-3346.914-coumarate--CoA ligase-like 6 OS=Oryza sativa sub... [more]
4CLL6_ARATH2.710e-3342.594-coumarate--CoA ligase-like 6 OS=Arabidopsis thal... [more]
4CLL3_ARATH7.886e-3343.214-coumarate--CoA ligase-like 3 OS=Arabidopsis thal... [more]
4CL4_ORYSJ1.030e-3244.30Probable 4-coumarate--CoA ligase 4 OS=Oryza sativa... [more]
4CL1_ORYSJ2.295e-3243.29Probable 4-coumarate--CoA ligase 1 OS=Oryza sativa... [more]
4CL3_ORYSJ2.997e-3243.67Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa... [more]
LUCI_LUCCR3.914e-3244.10Luciferin 4-monooxygenase OS=Luciola cruciata PE=1... [more]
LUCI_LUCMI5.112e-3244.72Luciferin 4-monooxygenase OS=Luciola mingrelica PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F02-K3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069908 ID=CX069908; Name=CX069908; organism=Citrus sinensis; type=EST; length=485bp
GTGACACACATATGGGTTGTTCCACCTCTTATTCTTGCATTGGCTAAGCA
TGGTTTGGTCAAGAAATTTGATCTTTCTTCATTGAAACTTGTTGGTTCTG
GTGCTGCTCCTTTGGGAAAGGAATTGATGGAGGAATGCGCAAAGAATGTA
CCTAGTGCAACAGTCATTCAGGGTTATGGTTTGACGGAAACTAGTGGTAT
TGCCACAATGGAGAATTCATTTGCAGGATCTCGAAATATTGGTTCAGCTG
GAGCACTTGCCCCAGGTGTTGAAGCCCTAATAGTCAGTGTGGATACTCAA
AAGCCTCTTCCTCCAAATCAGTTGGGGGAGATATGGCTACGAGGACCTAA
TATGATGCAAGGTTATTACAACAATGAACAAGCCACCAAGCTGACAATAG
ATAAAAAGGGTTGGGTACATACGGGTGATCTTGGATATTTTGATGGGGAT
GGCCAGCTATATGTTGTTGACCGAATCAAAGAGCT
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