CX069908

Overview
NameCX069908
Unique NameCX069908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL3_ORYSJ (4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp. japonica GN=4CLL3 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.445e-27
Identity = 64/164 (39.02%), Postives = 96/164 (58.54%), Query Frame = 1
Query:    1 VTHIWVVPPLILAL---AKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VTH+ +VPP++ A+   A  G V    ++SL  V  GAAP+   L+ E  +  P    IQGYG+TE++ + T   + +  +   S G LAP + A IV +++   LPP   GE+WL GP +M+GY +++        K GW+ TGD+ YFD DG LY+V R+K+
Sbjct:  316 VTHMPLVPPIMAAMVRAAAAGGVPPSQVASLVQVSCGAAPITAALIHEFLQAFPHVDFIQGYGMTESTAVGTRGFNTSKHKKYTSVGLLAPNMHAKIVHLESSSCLPPGFSGELWLHGPGIMKGYLSDDD--DACTRKDGWLRTGDIAYFDLDGYLYIVGRLKD 477          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 3.209e-26
Identity = 63/154 (40.91%), Postives = 88/154 (57.14%), Query Frame = 1
Query:   22 PPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            PP++L + K    ++  L +L+ +  G APL    +E   +  P   +  GYG TE  GI+ M +      +IGSAG +   VE  IV   T KPLP  Q GE+W+RGP +M GY  + +A   T + +GW+ TGDL Y D DG L+VVDR+KE
Sbjct:  304 PPVVLGMTK----QRCRLPALERITCGGAPLPAPAIERFRRRFPHVDLCMGYGSTEAGGISRMISQ-EECNHIGSAGRVTENVEVKIVDHVTGKPLPAGQQGELWVRGPAVMTGYVGDNEANATTFNSEGWLKTGDLCYIDQDGFLFVVDRLKE 452          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL2_ORYSJ (4-coumarate--CoA ligase-like 2 OS=Oryza sativa subsp. japonica GN=4CLL2 PE=2 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 9.337e-26
Identity = 64/167 (38.32%), Postives = 92/167 (55.09%), Query Frame = 1
Query:    1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQ------GYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VTH+ +VPP++ AL +       +L SL  V SGAAPL   L+       P    IQGYG+TE++ + T   +    +   S G LAP + A IV +++   LPP   GE+WL GP +M+      GY N++        K GW+ TGD+ YFD DG L++V R+K+
Sbjct:  294 VTHLPLVPPIMSALLRAN--PPLELDSLLQVSSGAAPLNHTLIHHFLHAFPHVDFIQGYGMTESTAVGTRGFNTCKHKKYASVGLLAPNMHAKIVHLESGSCLPPGSYGELWLHGPAIMKEFCFVTGYLNDDD--DAFTRKDGWLRTGDIAYFDSDGYLFIVGRLKD 456          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL5_ORYSJ (4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.548e-25
Identity = 62/161 (38.51%), Postives = 91/161 (56.52%), Query Frame = 1
Query:    1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VT +   PP+++A+ K+   ++ DLSSL ++G G APLG+E+ E+ A   P+  ++QGYGLTE+SG          S+  GS G L   ++A IV   T                     GY  +++AT  T+D +GW+ TGDL YF+ DG LY+VDR+KE
Sbjct:  297 VTLLPAAPPVLVAMVKYEEARRRDLSSLLVIGIGGAPLGREVAEQFASVFPNVELVQGYGLTESSGAVAATVGPEESKAYGSVGKLGSHLQAKIVDPST---------------------GYVGDDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKE 436          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL8_ORYSJ (Putative 4-coumarate--CoA ligase-like 8 OS=Oryza sativa subsp. japonica GN=4CLL8 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.262e-22
Identity = 77/213 (36.15%), Postives = 101/213 (47.42%), Query Frame = 1
Query:    1 VTHIWVVPPLIL----ALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATM-----------------------------------ENSFAGSRNIG--SAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTI-----------DKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VT + VVPP+++    A A  G   +  L   ++V SGA PL +E M       P+  + Q YGLTET+GI TM                                   E S  G    G  S G L P VEA IV  D+ + LPP + GE+W+RGP+ M+GY NNE+AT L +             + W+ TGDL Y D  G +YVVDR+KE
Sbjct:  289 VTRLLVVPPMVVKMVAAAAGDGEPSRRRLRLRQVVSSGA-PLQREHMARFRSCFPAVNLGQCYGLTETTGIVTMCDLQHNDNGIDKVEMPPSSTDMTFVAVAATTTEVKERSTGGGGGGGGVSIGRLMPDVEAKIVDPDSGELLPPRRTGELWVRGPSTMRGYLNNEEATALALVAAAGSVSVSGGGERWLRTGDLCYVDSRGLVYVVDRVKE 500          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LCFA_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21
Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 1
Query:   22 PPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            P + + L  H  ++ +DLSS+K   SG+A L  E+ ++  K V    +++GYGL+E S + T  N   G    GS G   P  +A I S +T +   P + GEI ++GP +M+GY+N  + T   + + GW+ TGD+GY D +G  Y+ DR K+
Sbjct:  305 PTIYIGLLHHPELQHYDLSSIKSCLSGSAALPVEVKQKFEK-VTGGKLVEGYGLSEASPV-THANFIWGKNKPGSIGCPWPSTDAAIYSEETGELAAPYEHGEIIVKGPQVMKGYWNKPEETAAVL-RDGWLFTGDMGYMDEEGFFYIADRKKD 455          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 8.465e-19
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1
Query:   19 VPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VP +   L +H   KK D SS++L  SG A +   L+    +     T+++GYGL+E S + T  N F   R  GS G     VE  +V     + LP +Q+GE+ ++GPN+M+GYY     T+  + K GW++TGDL   D DG  Y+VDR K+
Sbjct:  264 VPTMYNYLFQHENGKKDDFSSIRLCISGGASMPVALLTAFEEKF-GVTILEGYGLSEASPV-TCFNPFDRGRKPGSIGTSILHVENKVVD-PLGRELPAHQVGELIVKGPNVMKGYYKMPMETEHAL-KDGWLYTGDLARRDEDGYFYIVDRKKD 414          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACHK (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp. konkukian GN=menE PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.201e-18
Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1
Query:   76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            SSL+ +  G  P  K L+E C  K +P   V Q YG+TETS  I T+   +  ++ +GSAG   P  +  +        +PP   GEI ++GPN+  GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR
Sbjct:  253 SSLRCMLLGGGPAPKPLLETCVDKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 380          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACC0 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820) GN=menE PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.201e-18
Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1
Query:   76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            SSL+ +  G  P  K L+E C  K +P   V Q YG+TETS  I T+   +  ++ +GSAG   P  +  +        +PP   GEI ++GPN+  GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR
Sbjct:  253 SSLRCMLLGGGPAPKPLLETCVDKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 380          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACCR (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=menE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.487e-18
Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1
Query:   76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            SSL+ +  G  P  K L+E C  K +P   V Q YG+TETS  I T+   +  ++ +GSAG   P  +  +        +PP   GEI ++GPN+  GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR
Sbjct:  253 SSLRCMLLGGGPAPKPLLEACVEKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPPLVEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 380          
The following BLAST results are available for this feature:
BLAST of CX069908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
4CLL3_ORYSJ8.445e-2739.024-coumarate--CoA ligase-like 3 OS=Oryza sativa sub... [more]
4CLL7_ORYSJ3.209e-2640.914-coumarate--CoA ligase-like 7 OS=Oryza sativa sub... [more]
4CLL2_ORYSJ9.337e-2638.324-coumarate--CoA ligase-like 2 OS=Oryza sativa sub... [more]
4CLL5_ORYSJ3.548e-2538.514-coumarate--CoA ligase-like 5 OS=Oryza sativa sub... [more]
4CLL8_ORYSJ1.262e-2236.15Putative 4-coumarate--CoA ligase-like 8 OS=Oryza s... [more]
LCFA_BACSU5.302e-2136.36Long-chain-fatty-acid--CoA ligase OS=Bacillus subt... [more]
LCFB_BACSU8.465e-1938.06Long-chain-fatty-acid--CoA ligase OS=Bacillus subt... [more]
MENE_BACHK4.201e-1842.962-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]
MENE_BACC04.201e-1842.962-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCR5.487e-1842.962-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F02-K3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069908 ID=CX069908; Name=CX069908; organism=Citrus sinensis; type=EST; length=485bp
GTGACACACATATGGGTTGTTCCACCTCTTATTCTTGCATTGGCTAAGCA
TGGTTTGGTCAAGAAATTTGATCTTTCTTCATTGAAACTTGTTGGTTCTG
GTGCTGCTCCTTTGGGAAAGGAATTGATGGAGGAATGCGCAAAGAATGTA
CCTAGTGCAACAGTCATTCAGGGTTATGGTTTGACGGAAACTAGTGGTAT
TGCCACAATGGAGAATTCATTTGCAGGATCTCGAAATATTGGTTCAGCTG
GAGCACTTGCCCCAGGTGTTGAAGCCCTAATAGTCAGTGTGGATACTCAA
AAGCCTCTTCCTCCAAATCAGTTGGGGGAGATATGGCTACGAGGACCTAA
TATGATGCAAGGTTATTACAACAATGAACAAGCCACCAAGCTGACAATAG
ATAAAAAGGGTTGGGTACATACGGGTGATCTTGGATATTTTGATGGGGAT
GGCCAGCTATATGTTGTTGACCGAATCAAAGAGCT
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