CX069908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL3_ORYSJ (4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp. japonica GN=4CLL3 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 8.445e-27 Identity = 64/164 (39.02%), Postives = 96/164 (58.54%), Query Frame = 1 Query: 1 VTHIWVVPPLILAL---AKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483 VTH+ +VPP++ A+ A G V ++SL V GAAP+ L+ E + P IQGYG+TE++ + T + + + S G LAP + A IV +++ LPP GE+WL GP +M+GY +++ K GW+ TGD+ YFD DG LY+V R+K+ Sbjct: 316 VTHMPLVPPIMAAMVRAAAAGGVPPSQVASLVQVSCGAAPITAALIHEFLQAFPHVDFIQGYGMTESTAVGTRGFNTSKHKKYTSVGLLAPNMHAKIVHLESSSCLPPGFSGELWLHGPGIMKGYLSDDD--DACTRKDGWLRTGDIAYFDLDGYLYIVGRLKD 477
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.209e-26 Identity = 63/154 (40.91%), Postives = 88/154 (57.14%), Query Frame = 1 Query: 22 PPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483 PP++L + K ++ L +L+ + G APL +E + P + GYG TE GI+ M + +IGSAG + VE IV T KPLP Q GE+W+RGP +M GY + +A T + +GW+ TGDL Y D DG L+VVDR+KE Sbjct: 304 PPVVLGMTK----QRCRLPALERITCGGAPLPAPAIERFRRRFPHVDLCMGYGSTEAGGISRMISQ-EECNHIGSAGRVTENVEVKIVDHVTGKPLPAGQQGELWVRGPAVMTGYVGDNEANATTFNSEGWLKTGDLCYIDQDGFLFVVDRLKE 452
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL2_ORYSJ (4-coumarate--CoA ligase-like 2 OS=Oryza sativa subsp. japonica GN=4CLL2 PE=2 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 9.337e-26 Identity = 64/167 (38.32%), Postives = 92/167 (55.09%), Query Frame = 1 Query: 1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQ------GYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483 VTH+ +VPP++ AL + +L SL V SGAAPL L+ P IQGYG+TE++ + T + + S G LAP + A IV +++ LPP GE+WL GP +M+ GY N++ K GW+ TGD+ YFD DG L++V R+K+ Sbjct: 294 VTHLPLVPPIMSALLRAN--PPLELDSLLQVSSGAAPLNHTLIHHFLHAFPHVDFIQGYGMTESTAVGTRGFNTCKHKKYASVGLLAPNMHAKIVHLESGSCLPPGSYGELWLHGPAIMKEFCFVTGYLNDDD--DAFTRKDGWLRTGDIAYFDSDGYLFIVGRLKD 456
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL5_ORYSJ (4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.548e-25 Identity = 62/161 (38.51%), Postives = 91/161 (56.52%), Query Frame = 1 Query: 1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483 VT + PP+++A+ K+ ++ DLSSL ++G G APLG+E+ E+ A P+ ++QGYGLTE+SG S+ GS G L ++A IV T GY +++AT T+D +GW+ TGDL YF+ DG LY+VDR+KE Sbjct: 297 VTLLPAAPPVLVAMVKYEEARRRDLSSLLVIGIGGAPLGREVAEQFASVFPNVELVQGYGLTESSGAVAATVGPEESKAYGSVGKLGSHLQAKIVDPST---------------------GYVGDDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKE 436
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL8_ORYSJ (Putative 4-coumarate--CoA ligase-like 8 OS=Oryza sativa subsp. japonica GN=4CLL8 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.262e-22 Identity = 77/213 (36.15%), Postives = 101/213 (47.42%), Query Frame = 1 Query: 1 VTHIWVVPPLIL----ALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATM-----------------------------------ENSFAGSRNIG--SAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTI-----------DKKGWVHTGDLGYFDGDGQLYVVDRIKE 483 VT + VVPP+++ A A G + L ++V SGA PL +E M P+ + Q YGLTET+GI TM E S G G S G L P VEA IV D+ + LPP + GE+W+RGP+ M+GY NNE+AT L + + W+ TGDL Y D G +YVVDR+KE Sbjct: 289 VTRLLVVPPMVVKMVAAAAGDGEPSRRRLRLRQVVSSGA-PLQREHMARFRSCFPAVNLGQCYGLTETTGIVTMCDLQHNDNGIDKVEMPPSSTDMTFVAVAATTTEVKERSTGGGGGGGGVSIGRLMPDVEAKIVDPDSGELLPPRRTGELWVRGPSTMRGYLNNEEATALALVAAAGSVSVSGGGERWLRTGDLCYVDSRGLVYVVDRVKE 500
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LCFA_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 1 Query: 22 PPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483 P + + L H ++ +DLSS+K SG+A L E+ ++ K V +++GYGL+E S + T N G GS G P +A I S +T + P + GEI ++GP +M+GY+N + T + + GW+ TGD+GY D +G Y+ DR K+ Sbjct: 305 PTIYIGLLHHPELQHYDLSSIKSCLSGSAALPVEVKQKFEK-VTGGKLVEGYGLSEASPV-THANFIWGKNKPGSIGCPWPSTDAAIYSEETGELAAPYEHGEIIVKGPQVMKGYWNKPEETAAVL-RDGWLFTGDMGYMDEEGFFYIADRKKD 455
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 8.465e-19 Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1 Query: 19 VPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483 VP + L +H KK D SS++L SG A + L+ + T+++GYGL+E S + T N F R GS G VE +V + LP +Q+GE+ ++GPN+M+GYY T+ + K GW++TGDL D DG Y+VDR K+ Sbjct: 264 VPTMYNYLFQHENGKKDDFSSIRLCISGGASMPVALLTAFEEKF-GVTILEGYGLSEASPV-TCFNPFDRGRKPGSIGTSILHVENKVVD-PLGRELPAHQVGELIVKGPNVMKGYYKMPMETEHAL-KDGWLYTGDLARRDEDGYFYIVDRKKD 414
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACHK (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp. konkukian GN=menE PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.201e-18 Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474 SSL+ + G P K L+E C K +P V Q YG+TETS I T+ + ++ +GSAG P + + +PP GEI ++GPN+ GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR Sbjct: 253 SSLRCMLLGGGPAPKPLLETCVDKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 380
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACC0 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820) GN=menE PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.201e-18 Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474 SSL+ + G P K L+E C K +P V Q YG+TETS I T+ + ++ +GSAG P + + +PP GEI ++GPN+ GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR Sbjct: 253 SSLRCMLLGGGPAPKPLLETCVDKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 380
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACCR (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=menE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 5.487e-18 Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474 SSL+ + G P K L+E C K +P V Q YG+TETS I T+ + ++ +GSAG P + + +PP GEI ++GPN+ GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR Sbjct: 253 SSLRCMLLGGGPAPKPLLEACVEKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPPLVEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 380 The following BLAST results are available for this feature:
BLAST of CX069908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069908 ID=CX069908; Name=CX069908; organism=Citrus sinensis; type=EST; length=485bpback to top |