CX069908

Overview
NameCX069908
Unique NameCX069908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACAH (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis (strain Al Hakam) GN=menE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.487e-18
Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1
Query:   76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            SSL+ +  G  P  K L+E C  K +P   V Q YG+TETS  I T+   +  ++ +GSAG   P  +  +        +PP   GEI ++GPN+  GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR
Sbjct:  253 SSLRCMLLGGGPAPKPLLETCVDKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPPFVEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 380          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACCN (2-succinylbenzoate--CoA ligase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=menE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.166e-18
Identity = 58/135 (42.96%), Postives = 79/135 (58.52%), Query Frame = 1
Query:   76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            SSL+ +  G  P  K L+E C  K +P   V Q YG+TETS  I T+   +  ++ +GSAG   P     +      K +P N  GEI ++GPN+ +GY+  E AT+ TI   GW+HTGDLGY D +G LYV+DR
Sbjct:  252 SSLRCMLLGGGPAPKPLLEACVQKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFPCQLRIEKDGKVMPANVEGEIVVKGPNVTRGYFKREDATRETI-VDGWLHTGDLGYVDDEGFLYVLDR 379          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LCFA_ECOLI (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadD PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.359e-18
Identity = 57/160 (35.62%), Postives = 85/160 (53.12%), Query Frame = 1
Query:    4 THIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            T I  V  L  AL  +   ++ D SSL L   G  P+ + + E   K +    +++GYGLTE + + ++ N +    + GS G   P  EA +V  D    +PP Q GE+ ++GP +M GY+    AT   I K GW+HTGD+   D +G L +VDR K+
Sbjct:  301 TAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVK-LTGQYLLEGYGLTECAPLVSV-NPYDIDYHSGSIGLPVPSTEAKLVD-DDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEII-KNGWLHTGDIAVMDEEGFLRIVDRKKD 456          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LCFA_ECOL6 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6 GN=fadD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.359e-18
Identity = 57/160 (35.62%), Postives = 85/160 (53.12%), Query Frame = 1
Query:    4 THIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            T I  V  L  AL  +   ++ D SSL L   G  P+ + + E   K +    +++GYGLTE + + ++ N +    + GS G   P  EA +V  D    +PP Q GE+ ++GP +M GY+    AT   I K GW+HTGD+   D +G L +VDR K+
Sbjct:  301 TAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVK-LTGQYLLEGYGLTECAPLVSV-NPYDIDYHSGSIGLPVPSTEAKLVD-DDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEII-KNGWLHTGDIAVMDEEGFLRIVDRKKD 456          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACAN (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis GN=menE PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.222e-17
Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 1
Query:   88 LVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            L+G G AP  K L+E C  K +P   V Q YG+TETS  I T+   +  ++ +GSAG   P  +  +        +PP   GEI ++GPN+  GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR
Sbjct:  258 LLGGGPAP--KPLLETCVDKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 379          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACAC (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=menE PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.222e-17
Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 1
Query:   88 LVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            L+G G AP  K L+E C  K +P   V Q YG+TETS  I T+   +  ++ +GSAG   P  +  +        +PP   GEI ++GPN+  GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR
Sbjct:  259 LLGGGPAP--KPLLETCVDKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 380          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACAA (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain A0248) GN=menE PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.222e-17
Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 1
Query:   88 LVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            L+G G AP  K L+E C  K +P   V Q YG+TETS  I T+   +  ++ +GSAG   P  +  +        +PP   GEI ++GPN+  GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR
Sbjct:  259 LLGGGPAP--KPLLETCVDKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 380          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACWK (2-succinylbenzoate--CoA ligase OS=Bacillus weihenstephanensis (strain KBAB4) GN=menE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.596e-17
Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 1
Query:   76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            SSL+ +  G  P  K L+E C  K +P   V Q YG+TETS  I T+   +  ++ +GSAG   P  +  +        +PP   GEI ++GPN+  GY+N E AT   I + GW+HTGDLGY D +G LYV+DR
Sbjct:  252 SSLRCMLLGGGPAPKPLLETCVEKGIP---VYQTYGMTETSSQICTLTADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPPRAEGEIVVKGPNVTGGYFNREDATHEAI-RNGWLHTGDLGYLDEEGFLYVLDR 379          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACCZ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ZK / E33L) GN=menE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.085e-17
Identity = 58/131 (44.27%), Postives = 78/131 (59.54%), Query Frame = 1
Query:   88 LVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            L+G G AP  K L+E C  K +P   V Q YG+TETS  I T+   +   + +GSAG   P  +  +        +PP   GEI ++GPN+  GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR
Sbjct:  259 LLGGGPAP--KPLLEACVEKRIP---VYQTYGMTETSSQICTLSADYMLMK-VGSAGK--PLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 380          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACCQ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1) GN=menE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.556e-17
Identity = 57/135 (42.22%), Postives = 79/135 (58.52%), Query Frame = 1
Query:   76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            SSL+ +  G  P  K L+E C  K +P   V Q YG+TETS  I T+   +  ++ +GSAG   P  +  +        +P    GEI ++GPN+  GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR
Sbjct:  252 SSLRCMLLGGGPAPKPLLETCVEKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 379          
The following BLAST results are available for this feature:
BLAST of CX069908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
MENE_BACAH5.487e-1842.962-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]
MENE_BACCN7.166e-1842.962-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
LCFA_ECOLI9.359e-1835.63Long-chain-fatty-acid--CoA ligase OS=Escherichia c... [more]
LCFA_ECOL69.359e-1835.63Long-chain-fatty-acid--CoA ligase OS=Escherichia c... [more]
MENE_BACAN1.222e-1744.272-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAC1.222e-1744.272-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAA1.222e-1744.272-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACWK1.596e-1742.222-succinylbenzoate--CoA ligase OS=Bacillus weihens... [more]
MENE_BACCZ2.085e-1744.272-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCQ3.556e-1742.222-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F02-K3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069908 ID=CX069908; Name=CX069908; organism=Citrus sinensis; type=EST; length=485bp
GTGACACACATATGGGTTGTTCCACCTCTTATTCTTGCATTGGCTAAGCA
TGGTTTGGTCAAGAAATTTGATCTTTCTTCATTGAAACTTGTTGGTTCTG
GTGCTGCTCCTTTGGGAAAGGAATTGATGGAGGAATGCGCAAAGAATGTA
CCTAGTGCAACAGTCATTCAGGGTTATGGTTTGACGGAAACTAGTGGTAT
TGCCACAATGGAGAATTCATTTGCAGGATCTCGAAATATTGGTTCAGCTG
GAGCACTTGCCCCAGGTGTTGAAGCCCTAATAGTCAGTGTGGATACTCAA
AAGCCTCTTCCTCCAAATCAGTTGGGGGAGATATGGCTACGAGGACCTAA
TATGATGCAAGGTTATTACAACAATGAACAAGCCACCAAGCTGACAATAG
ATAAAAAGGGTTGGGTACATACGGGTGATCTTGGATATTTTGATGGGGAT
GGCCAGCTATATGTTGTTGACCGAATCAAAGAGCT
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