CX069908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LCFA_ECO57 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7 GN=fadD PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.556e-17 Identity = 57/160 (35.62%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 4 THIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483 T I V L AL + ++ D SSL L G P+ + + E K + +++GYGLTE + + ++ N + + GS G P EA +V D + P Q GE+ +RGP +M GY+ AT I K GW+HTGD+ D +G L +VDR K+ Sbjct: 301 TAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVK-LTGQYLLEGYGLTECAPLVSV-NPYDIDYHSGSIGLPVPSTEAKLVD-DDDNEVSPGQPGELCVRGPQVMLGYWQRPDATDEII-KNGWLHTGDIAVMDEEGFLRIVDRKKD 456
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_GEOKA (2-succinylbenzoate--CoA ligase OS=Geobacillus kaustophilus GN=menE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.645e-17 Identity = 59/147 (40.14%), Postives = 86/147 (58.50%), Query Frame = 1 Query: 40 LAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTET-SGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474 +A+ G + D L+G G AP + L+E C K +P V Q YG+TET S IAT+ ++ ++ +GSAG P A + + KP P++ GEI ++GPN+ +GY+ +AT I + GW TGD+GY D DG LYV+DR Sbjct: 245 VAELGEARYPDTFRCMLLGGGPAP--RPLLEACKEKGIP---VYQTYGMTETASQIATLAPEYSLTK-LGSAGK--PLFPAELCILKDGKPAAPHEAGEIVVKGPNVTKGYWQRPEATAQAI-RGGWFFTGDIGYLDEDGFLYVLDR 382
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACLD (2-succinylbenzoate--CoA ligase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=menE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.645e-17 Identity = 58/131 (44.27%), Postives = 78/131 (59.54%), Query Frame = 1 Query: 88 LVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTET-SGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474 L+G G APL L+EEC K +P V+Q YG+TET S IAT+ ++ + +GSAG P + I P + GEI ++GP +M+GY NE A K + + GW TGD+GYFD DG LYV+DR Sbjct: 262 LLGGGPAPLS--LLEECKRKRLP---VVQSYGMTETCSQIATLAPEYSIEK-LGSAGK--PLFASSIKIEKNGTECQPGEHGEITVKGPTVMKGYLKNEAANKDSFND-GWFKTGDIGYFDDDGFLYVLDR 383
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACC7 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH187) GN=menE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.066e-17 Identity = 56/135 (41.48%), Postives = 79/135 (58.52%), Query Frame = 1 Query: 76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474 SSL+ + G P K ++E C K +P V Q YG+TETS I T+ + ++ +GSAG P + + +P GEI ++GPN+ GY+N E AT+ TI + GW+HTGDLGY D +G LYV+DR Sbjct: 252 SSLRCMLLGGGPAPKPILETCVEKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCRLRIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDR 379
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACC1 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 10987) GN=menE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.066e-17 Identity = 56/135 (41.48%), Postives = 79/135 (58.52%), Query Frame = 1 Query: 76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474 SSL+ + G P K L+E C K +P V Q YG+TETS I T+ + ++ +GSAG P + + +P GEI ++GPN+ GY+N E AT+ TI + GW+HTGD+GY D +G LYV+DR Sbjct: 252 SSLRCMLLGGGPAPKPLLETCVEKGIP---VYQTYGMTETSSQICTLSADYMLTK-VGSAGK--PLFQCQLRIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDIGYLDEEGFLYVLDR 379
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACA2 (2-succinylbenzoate--CoA ligase OS=Bacillus amyloliquefaciens (strain FZB42) GN=menE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.035e-16 Identity = 56/130 (43.08%), Postives = 73/130 (56.15%), Query Frame = 1 Query: 88 LVGSGAAPLGKELMEECAKNVPSATVIQGYGLTET-SGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474 L+G G APL L+EEC + V Q YGLTET S I T+ F+ + +GSAG E I P P + GEI ++GPN+M+GYY+ + A + GW TGDLGY D +G LYV+DR Sbjct: 262 LLGGGPAPL--PLLEECRRK--QFPVFQSYGLTETCSQIVTLSPEFSMDK-LGSAGKPLFSCEIRIEK--DGNPCAPFEHGEITVKGPNVMKGYYHRDDANQAAFHN-GWFKTGDLGYLDDEGFLYVLDR 383
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_OCEIH (2-succinylbenzoate--CoA ligase OS=Oceanobacillus iheyensis GN=menE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.765e-16 Identity = 58/154 (37.66%), Postives = 77/154 (50.00%), Query Frame = 1 Query: 16 VVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474 +V LI L H F L+G G AP K L+E+ KN+P V Q YG+TETS + IGSAG + I + PNQ+GEI ++GP + +GYY + K + + W+HTGD+GY D G LYVVDR Sbjct: 243 MVQRLIKRLGNHHYPNDF---RCMLLGGGPAP--KSLLEQAKLKNIP---VFQSYGMTETSSQIVTLTPEDALKKIGSAGKPLFPAQLKIAHNENN----PNQIGEILVKGPMVTKGYYKRAETNK-EVFENNWLHTGDMGYLDEQGYLYVVDR 383
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LCFA_SALTY (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium GN=fadD PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.011e-16 Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 1 Query: 19 VPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483 V L AL + ++ D SSL L G P+ + E K + +++GYGLTE + + ++ N + GS G P EA +V D + P + GE+ ++GP +M GY+ AT I K GW+HTGD+ D DG L +VDR K+ Sbjct: 306 VNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQNVVAERWVK-LTGQYLLEGYGLTECAPLVSV-NPHDIDYHSGSIGLPVPSTEAKLVD-DDDNEVAPGEAGELCVKGPQVMLGYWQRPDATDEII-KDGWLHTGDIAVMDEDGFLRIVDRKKD 456
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LCFA_SALTI (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.011e-16 Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 1 Query: 19 VPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483 V L AL + ++ D SSL L G P+ + E K + +++GYGLTE + + ++ N + GS G P EA +V D + P + GE+ ++GP +M GY+ AT I K GW+HTGD+ D DG L +VDR K+ Sbjct: 306 VNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQNVVAERWVK-LTGQYLLEGYGLTECAPLVSV-NPHDIDYHSGSIGLPVPSTEAKLVD-DDDNEVAPGEAGELCVKGPQVMLGYWQRPDATDEII-KDGWLHTGDIAVMDEDGFLRIVDRKKD 456
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACSU (2-succinylbenzoate--CoA ligase OS=Bacillus subtilis GN=menE PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 3.932e-16 Identity = 55/130 (42.31%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 88 LVGSGAAPLGKELMEECAKNVPSATVIQGYGLTET-SGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474 L+G G APL L+EEC + V Q YG+TET S I T+ F+ + +GSAG E + + D Q P + GEI ++GPN+M+ Y+N E A + + + GW+ TGDLGY D +G LYV+DR Sbjct: 261 LLGGGPAPL--PLLEECREK--GFPVFQSYGMTETCSQIVTLSPEFSMEK-LGSAGKPLFSCE-IKIERDGQV-CEPYEHGEIMVKGPNVMKSYFNRESANEASF-QNGWLKTGDLGYLDNEGFLYVLDR 382 The following BLAST results are available for this feature:
BLAST of CX069908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069908 ID=CX069908; Name=CX069908; organism=Citrus sinensis; type=EST; length=485bpback to top |