CX069908

Overview
NameCX069908
Unique NameCX069908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_ENTFA (2-succinylbenzoate--CoA ligase OS=Enterococcus faecalis GN=menE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.136e-16
Identity = 52/137 (37.96%), Postives = 71/137 (51.82%), Query Frame = 1
Query:   76 SSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            +S K +  G  P+  + + +C  K +P   VIQ YG+TET            +  IGSAG     ++  IV    Q+  P  Q+GEI L+GPN++ GY N  Q  K T D  GW  TGD+GY D    LY+V R+ E
Sbjct:  252 ASFKGMLLGGGPIAPDKLAQCEEKGIP---VIQSYGMTETCSQVVALKFEDAALKIGSAGQPLKDMQIKIVDELGQEQ-PEKQVGEILLKGPNVVSGYLNQRQPEKWTAD--GWFKTGDMGYLDAQSYLYLVSRLSE 382          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_GEOSW (2-succinylbenzoate--CoA ligase OS=Geobacillus sp. (strain WCH70) GN=menE PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.329e-15
Identity = 57/132 (43.18%), Postives = 78/132 (59.09%), Query Frame = 1
Query:   88 LVGSGAAPLGKELMEEC-AKNVPSATVIQGYGLTET-SGIATMENSFAGSRNIGSAGA-LAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            L+G G AP  K L+E C AK +P   V Q YG+TET S IAT+   ++ ++ +GSAG  L P    +       +P  P   GEI ++GPN+ +GY +   AT   I + GW +TGD+GY D DG LYV+DR
Sbjct:  262 LLGGGPAP--KPLLEVCKAKGIP---VYQTYGMTETASQIATLAPEYSLTK-LGSAGKPLFPSQLRIEKDGQVARPYEP---GEIVVKGPNVTKGYLHRPDATAKAI-RGGWFYTGDIGYIDEDGFLYVLDR 383          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: LCF2_YEAST (Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyces cerevisiae GN=FAA2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.347e-15
Identity = 44/137 (32.12%), Postives = 73/137 (53.28%), Query Frame = 1
Query:   73 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQL-GEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIK 480
            LS+   + +G+AP+ K+ +    ++     + QGYGLTET     +   F   +++GS GA+    E  + SV          L GE+ +RGP + + Y+ N   T   +D+ GW  TGD+ + DG G++ V+DR+K
Sbjct:  458 LSNNSFIITGSAPISKDTLL-FLRSALDIGIRQGYGLTETFAGVCLSEPF--EKDVGSCGAIGISAECRLKSVPEMGYHADKDLKGELQIRGPQVFERYFKNPNETSKAVDQDGWFSTGDVAFIDGKGRISVIDRVK 591          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: YNGI_BACSU (Putative acyl-CoA synthetase yngI OS=Bacillus subtilis GN=yngI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.678e-15
Identity = 48/158 (30.38%), Postives = 77/158 (48.73%), Query Frame = 1
Query:   19 VPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATM---ENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VP + +A   H     +DLS+L+      +P   E+M+   + +    +   YG TE S + T     +SF   R + + G   P  E  IV   T + +     GE+  RG ++M+GYY ++ AT+  I+  GW+ TGDL   D DG   +  R+K+
Sbjct:  286 VPTMFIAELHHPDFDAYDLSTLRTGIMAGSPCPSEVMKAVIERMGMKDITIAYGQTEASPVITQTRANDSFI--RRVETTGRALPHTEVKIVEPGTCQEVQRGMQGELCTRGYHVMKGYYKDKDATRKAINHDGWLFTGDLAVMDEDGYCRITGRLKD 441          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: MENE_BACP2 (2-succinylbenzoate--CoA ligase OS=Bacillus pumilus (strain SAFR-032) GN=menE PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15
Identity = 57/136 (41.91%), Postives = 78/136 (57.35%), Query Frame = 1
Query:   76 SSLK--LVGSGAAPLGKELMEECAKNVPSATVIQGYGLTET-SGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDR 474
            SSL+  L+G G APL   L E   K  P   V Q YG+TET S I T+   F+  + +GSAG    G E  I   D  +   P + GEI ++G N+M+GY   E++T    D+ GW+ TGD+GY D +G L+V+DR
Sbjct:  254 SSLRCLLLGGGPAPLAM-LQESKEKGFP---VFQSYGMTETCSQIVTLAPEFSVEK-LGSAGKPLFGCELKIQ--DGTRICRPFEHGEIMVKGANVMKGYLYREESTAAAFDQ-GWLKTGDIGYVDEEGFLFVLDR 381          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: ACBG2_CHICK (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Gallus gallus GN=ACSBG2 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15
Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1
Query:   97 SGAAPLGKELMEE-CAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            +GAAP+ +E +E   + N+P   V + YG++E+SG  T+  S   +  + S G    G   LI   D       + +GEI   G ++  GY N E+ TK  IDK GW+H+GDLG  D DG +Y+  RIKE
Sbjct:  450 TGAAPISRETLEFFLSLNIP---VFELYGMSESSGPHTV--SIPQAFRLTSCGKEMAGCRTLIHKPDA------DGIGEICFAGRHIFMGYLNMEEKTKEAIDKDGWLHSGDLGKCDKDGFIYITGRIKE 568          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: ACBG1_MACFA (Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Macaca fascicularis GN=ACSBG1 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.158e-14
Identity = 44/104 (42.31%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  172 GYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            GYGL+ETSG   M +    +  + S+G L PG    +V+ DT+       +GEI L G  +  GY N E  T   ID++GW+HTGD G  D DG LY+  R+KE
Sbjct:  473 GYGLSETSGPHFMSSPC--NYRLYSSGKLVPGCRVKLVNQDTEG------IGEICLWGRTIFMGYLNMEDKTCEAIDEEGWLHTGDAGRLDADGFLYITGRLKE 568          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: ACBG1_HUMAN (Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Homo sapiens GN=ACSBG1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.158e-14
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  172 GYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            GYGL+ETSG   M + +  +  + S+G L PG    +V+ D +       +GEI L G  +  GY N E  T   ID++GW+HTGD G  D DG LY+  R+KE
Sbjct:  473 GYGLSETSGPHFMSSPY--NYRLYSSGKLVPGCRVKLVNQDAEG------IGEICLWGRTIFMGYLNMEDKTCEAIDEEGWLHTGDAGRLDADGFLYITGRLKE 568          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: ACBG1_BOVIN (Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Bos taurus GN=ACSBG1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.807e-14
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  172 GYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            GYGL+ETSG   M + +  +  + S+G + PG +  +V+ D +       +GEI L G  +  GY N E  T   ID +GW+HTGD G  D DG LY+  R+KE
Sbjct:  456 GYGLSETSGPHFMSSPY--NYRLYSSGKVVPGCQVKLVNEDAEG------IGEICLWGRTIFMGYLNMEDKTCEAIDAEGWLHTGDTGRLDADGFLYITGRLKE 551          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14
Identity = 46/139 (33.09%), Postives = 75/139 (53.96%), Query Frame = 1
Query:   82 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV------DTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIK 480
            +K + SG+APL  +L E   +      V+ GYGL+E  G A++  ++    N+G  G      E  ++ V       T KP P    GE+ +RG N+ +GY+ + + TK  + + GW HTGD+G ++ +G L ++DR K
Sbjct:  386 VKFILSGSAPLDPKLAE-FLRACFCCPVVSGYGLSENVGGASV--AYPEDNNVGHVGPPLSACEMKLIDVPEMNYFSTDKPCPR---GEVCIRGFNVFKGYFKDPEKTKEDLKEDGWFHTGDIGRWNENGTLSIIDRKK 518          
The following BLAST results are available for this feature:
BLAST of CX069908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
MENE_ENTFA5.136e-1637.962-succinylbenzoate--CoA ligase OS=Enterococcus fae... [more]
MENE_GEOSW3.329e-1543.182-succinylbenzoate--CoA ligase OS=Geobacillus sp. ... [more]
LCF2_YEAST4.347e-1532.12Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyc... [more]
YNGI_BACSU5.678e-1530.38Putative acyl-CoA synthetase yngI OS=Bacillus subt... [more]
MENE_BACP29.685e-1541.912-succinylbenzoate--CoA ligase OS=Bacillus pumilus... [more]
ACBG2_CHICK9.685e-1538.46Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Gallus... [more]
ACBG1_MACFA2.158e-1442.31Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Macaca... [more]
ACBG1_HUMAN2.158e-1441.35Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Homo s... [more]
ACBG1_BOVIN4.807e-1440.38Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Bos ta... [more]
FCSA_DICDI6.278e-1433.09Fatty acyl-CoA synthetase A OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F02-K3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069908 ID=CX069908; Name=CX069908; organism=Citrus sinensis; type=EST; length=485bp
GTGACACACATATGGGTTGTTCCACCTCTTATTCTTGCATTGGCTAAGCA
TGGTTTGGTCAAGAAATTTGATCTTTCTTCATTGAAACTTGTTGGTTCTG
GTGCTGCTCCTTTGGGAAAGGAATTGATGGAGGAATGCGCAAAGAATGTA
CCTAGTGCAACAGTCATTCAGGGTTATGGTTTGACGGAAACTAGTGGTAT
TGCCACAATGGAGAATTCATTTGCAGGATCTCGAAATATTGGTTCAGCTG
GAGCACTTGCCCCAGGTGTTGAAGCCCTAATAGTCAGTGTGGATACTCAA
AAGCCTCTTCCTCCAAATCAGTTGGGGGAGATATGGCTACGAGGACCTAA
TATGATGCAAGGTTATTACAACAATGAACAAGCCACCAAGCTGACAATAG
ATAAAAAGGGTTGGGTACATACGGGTGATCTTGGATATTTTGATGGGGAT
GGCCAGCTATATGTTGTTGACCGAATCAAAGAGCT
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