CX069906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_NICTO (Putative membrane protein ycf1 OS=Nicotiana tomentosiformis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.563e-43 Identity = 124/298 (41.61%), Postives = 166/298 (55.70%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIK-------------------------ELSKIN------LREIEKLRET--QKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNK---PTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+KR SFFEPIF FI L+ K GKIK ELSK+N +EI++ ET +K+S+IS Q+I+EP +I S +W S E KMKDLT+RTS I+NQI +ITKEKKK +T E +IS NK T ++K + K I++ILK+RN RLI K + FLKF I+++Y ++F+S + IPRINT+ F EST K+I+K I NE N ++I+ ISTI+ +L SQAYVFYKL Q ++ Sbjct: 956 PFGSPRKRPSFFEPIFKELEKKIGKFKKKYFITLKVLK-GKIKLFRRVSKETKKWLIKSSLFIKKMKKELSKVNPIVLFRFKEIDESNETKKEKDSLISNQIINEPFSQIESGNWPNSSLIESKMKDLTDRTSTIKNQIERITKEKKK--VTPEIDISPNKSPNKTNNIKKFESPKNIFQILKRRNTRLIWKFHYFLKFFIQRLYIDLFLSIINIPRINTQLFLESTN---KLIDKYISKNEINQKKIH------FISTIKKSLYNISKKNSHIFFDLSYL--SQAYVFYKLSQTQVI 1239
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_SOLLC (Putative membrane protein ycf1 OS=Solanum lycopersicum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 123/297 (41.41%), Postives = 163/297 (54.88%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIK-------------------------ELSKINL------REIEKLRETQKNS--IISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNR--IISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+KR SFFEPIF F+ L+ K GK K ELSK+NL +EI + ET+K +IS Q+I+E +I S +W S E KMKDLTNRTS I+N+I +ITKEKKK +T E +I+ NK T ++K + K+I++ILK RN R+I K + FLK I+++Y N+F+S + IPRI T+ F +ST K+IEK I NNE N E+IN K ISTI+ C+L SQAYVFYKL Q ++ Sbjct: 949 PFGSPRKRPSFFEPIFKELEKKIGKFKKKYFLTLKILK-GKTKLFRKVSKETTKLFIKSIGFLKKIKKELSKVNLIVLFRFKEISESNETKKEKDYLISNQIINESFRQIESGNWPNSSLIETKMKDLTNRTSTIKNKIERITKEKKK--VTPEIDINPNK-TNNIKKFESPKKIFQILKSRNTRVIWKFHYFLKLFIQRLYINLFLSIINIPRITTQLFLKSTN---KLIEKFISNNEINQEKINNQKKIHFMFISTIKKSLYNISKKNSHILCDLSYL--SQAYVFYKLSQTQVI 1236
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_SOLTU (Putative membrane protein ycf1 OS=Solanum tuberosum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.734e-42 Identity = 123/299 (41.14%), Postives = 167/299 (55.85%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIK-------------------------ELSKIN------LREIEKLRETQKNS--IISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI----ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+KR SFFEPIF F+ L+ FK GK K ELSK+N +EI + ET+K +IS Q+I+E +I S +W S E KMKDLT+RTS I+NQI +ITK+KKK +T E +I+ NK T ++K L+ K+ ++IL++RN R+I K + FLK I+++Y ++F+S + IPRI T+ F EST K+IEK I NNE N E+I TNK +I ISTI+ C+L SQAYVFYKL Q ++ Sbjct: 947 PFGSPRKRPSFFEPIFKELEKKIGKLKKKYFLTLKIFK-GKTKLFRRVSKETKKWFIKSIGFLKKIKKELSKVNPIVLFRFKEISESNETKKEKDYLISNQIINESFSQIESGNWPNSSLIETKMKDLTDRTSTIKNQIERITKDKKK--VTPEIDINPNK-TNNIKKLESPKKFFQILQRRNTRVIWKFHYFLKLFIQRLYIDLFLSIINIPRITTQLFLESTN---KLIEKFISNNEINQEKI--TNKKKIHFIFISTIKKSLYNISKKNSHIFCDLSYL--SQAYVFYKLSQTQVI 1234
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_DRANE (Putative membrane protein ycf1 OS=Draba nemorosa GN=ycf1-A PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.734e-42 Identity = 119/295 (40.34%), Postives = 162/295 (54.92%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------------------------GKIKELSKIN------LREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKN--IHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGS +K+ SFFEPIF F VL FKE GKIK +SK N LREI +L ET+K+SI+S QMI+ S++ SM+WT S +E K+K+L +R I+NQ +I KEK+ + T N KP Y KI++ SK+ W+ K++N RLIRK + F KF IE+++R IF+ + IPRI T+ F EST+ +I++K+ I+ NE N E+ NK KN I ISTI+ C+L SQAYVFYKL Q+ + Sbjct: 899 PFGSAKKKPSFFEPIFKELKKRIKKFKRKPFWVLSIFKERATILLKVAKEIKNWILQNLLFLKGKIKNISKQNRMPLFDLREISELNETKKDSIMSNQMIYGLSVQKKSMEWTNSSLSENKIKNLIDRIKTIKNQTEEILKEKENLTNTNRCN----KPRYDSKIIESSKKSWQTFKRKNIRLIRKFFFFFKFCIEQLFRTIFLGIINIPRITTQLFFESTK---EILDKSIYIYKNEENGEK-NKNKKNTIFFISTIK-NLISKKKIFSYDLCSL-----SQAYVFYKLSQIQV 1179
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_ARATH (Putative membrane protein ycf1 OS=Arabidopsis thaliana GN=ycf1-A PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.734e-42 Identity = 119/287 (41.46%), Postives = 157/287 (54.70%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK--------------------IKELSKINL------REIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGS Q++ SFFEPI SF+VL+ FKE IK +SK NL REI +L E +K+SIIS QMIHE S++ S++WT S +EKK+K+L +R IRNQI +I+KEK Q S K Y KI++ SK+IW+ K++N RLIRKS F KF IE++ IF+ + IPRI T+ F EST+ KI++K I+ NE N E+ K N ISTI+ C+L SQAYVFYKL Q+ + Sbjct: 896 PFGSAQRKPSFFEPISKELKKRIKKLKKKSFVVLKIFKERAPIFLKVAKETKNWILKNFIFIKGISKRNLIPLFGPREIYELNEPKKDSIISNQMIHELSVQNKSLEWTNSSLSEKKIKNLIDRKKTIRNQIEEISKEK------QNLTNSCTKLRYDSKIIESSKKIWQTFKRKNTRLIRKSIFFFKFCIEQMSIAIFLGIINIPRITTQLFFESTK---KILDKYIYKNEENGEK--KKNTLYFISTIK-NLISNKKKMSYDLCSL-----SQAYVFYKLSQIKV 1165
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_PLAOC (Putative membrane protein ycf1 OS=Platanus occidentalis GN=ycf1 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.265e-42 Identity = 128/305 (41.97%), Postives = 163/305 (53.44%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK------------------------IKELSKIN------LREI-----EKLRETQKNSI--ISKQMIHEPSIEISSMDWTKL--SRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNI--HNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+ + SFFEPI F +LR KE +KEL+KIN L+E+ K R+ +NSI IS Q+IHE I I S DWT S TEKKMK+L +RTS IRNQI +ITK+KKK LT E NIS K + K + K W I+KKR+ RLIRK + FLKF IEKIY + + IPRIN + F EST+ KI++K I +N+E N E I++ N+ +I ISTI+ C+L S SQAYVFYKL Q ++ Sbjct: 946 PFGSPRNQPSFFEPILKELEKKIRKVKNQFFRILRVVKERTKWFLTVLKEKKRWVIEIILFIKRIMKELAKINPILLFGLKEVYESSENKNRKNSQNSITIISNQIIHESPIRIRSTDWTNYYYSLTEKKMKNLADRTSTIRNQIERITKDKKKIFLTPEINISPKKMSCGDKRSESLKSFWEIVKKRSIRLIRKWHFFLKFVIEKIY---LLCIINIPRINAQLFLESTK---KILDKYIYNYNDETNQEEIDEINQKKIHFISTIKKSLFHISNNNSQIFCDLSSL--SQAYVFYKLSQTKVI 1242
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_ACOCL (Putative membrane protein ycf1 OS=Acorus calamus GN=ycf1 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.958e-42 Identity = 113/287 (39.37%), Postives = 161/287 (56.10%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIV---LRDFKEGKIKELSKI--------------------NLREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFG P+ R SFF+PIF SF+ +DF + K ++KI L+++ + E QK+SIIS ++ HE +++I S +WT S EKKMKDL++RT R+QI +ITK+K+KG LT + NI SN+ + + K + K I RI KKR+ R IRK + F+K IE+IY +IF+ T+ IPRIN + F ES + KI+ K+I N+E N E+I++TN+N I ISTI+ S SQAYV YKL Q ++ Sbjct: 975 PFGPPRNRPSFFKPIFEELDTNIRKVENQSFVFKEKTKDFLKKKTGWVTKIVLLKNKIRNFFTKVNPNLLFGLKKVYEPSENQKDSIISNKITHESTVQIPSSNWTNYSPIEKKMKDLSDRTITTRSQIERITKDKQKGFLTSDINIRSNETSCNAKRTELQKDILRIAKKRSIRFIRKLHSFVKSFIERIYLDIFLCTINIPRINLQLFFESIK---KILNKSISNDERNKEKIDETNQNTIHFISTIRNSFSNSNLNNKSKIYWDFSL-LSQAYVLYKLSQTQVI 1257
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_ACOAM (Putative membrane protein ycf1 OS=Acorus americanus GN=ycf1 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.958e-42 Identity = 113/287 (39.37%), Postives = 161/287 (56.10%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIV---LRDFKEGKIKELSKI--------------------NLREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFG P+ R SFF+PIF SF+ +DF + K ++KI L+++ + E QK+SIIS ++ HE +++I S +WT S EKKMKDL++RT R+QI +ITK+K+KG LT + NI SN+ + + K + K I RI KKR+ R IRK + F+K IE+IY +IF+ T+ IPRIN + F ES + KI+ K+I N+E N E+I++TN+N I ISTI+ S SQAYV YKL Q ++ Sbjct: 975 PFGPPRNRPSFFKPIFEELDTNIRKVENQSFVFKEKTKDFLKKKTGWVTKIVLLKNKIRNFFTKVNPNLLFGLKKVYEPSENQKDSIISNKITHESTVQIPSSNWTNYSPIEKKMKDLSDRTITTRSQIERITKDKQKGFLTSDINIRSNETSCNAKRTELQKDILRIAKKRSIRFIRKLHSFVKSFIERIYLDIFLCTINIPRINLQLFFESIK---KILNKSISNDERNKEKIDETNQNTIHFISTIRNSFSNSNLNNKSKIYWDFSL-LSQAYVLYKLSQTQVI 1257
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_ILLOL (Putative membrane protein ycf1 OS=Illicium oligandrum GN=ycf1 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.863e-42 Identity = 116/301 (38.54%), Postives = 164/301 (54.49%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEG------------------------KIKELSK------INLREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQ-------XXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+KR SFF+PI+ F+ LR FK+ K+KEL+K LR++ + E +K+SIIS ++ E S+ + SMDWT S TEKKMKDL +RT+ IR+QI +ITK+KK +T NIS N+ + K + K IW++ KK +ARLI K F+K I++IY +IF+ + +PR+N + F E R + K+I+K I+N+E N E I++TN+N I ISTI+ C+L S SQAYVFY L Q +L Sbjct: 942 PFGSPRKRPSFFKPIWKEFQQKITKVKKKRFLFLRVFKKRTKGFLKISKEKTRWVIKIVLFIKKKMKELTKETLIVLFGLRKVYEPNENRKDSIISDKITPESSLRVGSMDWTNYSLTEKKMKDLADRTTPIRDQIERITKDKKDNFITPNINISPNERSCGDKRPELQKHIWKVFKKGSARLIPKWNYFMKSFIQRIYIDIFLYAINMPRVNAQLFLE-LRIRKKMIDKYIYNDETNQEGIDETNQNTIHFISTIKSLSNITNISHSNISNNNSQIYCDLSSL--SQAYVFYILSQTQVL 1239
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_OLIPU (Putative membrane protein ycf1 OS=Olimarabidopsis pumila GN=ycf1-A PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.589e-42 Identity = 118/293 (40.27%), Postives = 157/293 (53.58%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------------------------GKIKELSKINL------REIEKLR--ETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGS QK+ SFFEPIF SF+VL FKE GKIK+LSK N REI +L +T+K+SIIS QMI+E S++ SM+WT S +E K+K+L +R IRNQI +I+KEK Q S K Y KI++ SK+IW+ K++N RLIRKS F+KF IE++ R F+ + IPR + F EST+ I++K I+ N+ N E+ K N ISTI+ C+L SQAYVFYKL Q+ + Sbjct: 899 PFGSAQKKPSFFEPIFKELKKRIKKLKTKSFLVLSIFKERATIFLKVAKEIKNWILKNFLFIKGKIKDLSKRNKIPVFDSREIYELNVNQTKKDSIISNQMINELSVQKKSMEWTNSSLSENKIKNLIDRIKTIRNQIEEISKEK------QNLTNSCTKLRYDSKIIESSKKIWQTFKRKNTRLIRKSIFFIKFCIEQLSRAFFLGIINIPRTTIQLFFESTK---TILDKYIYKNQENGEKKKKKNTIYFISTIK--NLISKKKISYDLCSL-----SQAYVFYKLSQIKV 1175 The following BLAST results are available for this feature:
BLAST of CX069906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069906 ID=CX069906; Name=CX069906; organism=Citrus sinensis; type=EST; length=786bpback to top |