EY720880

Overview
NameEY720880
Unique NameEY720880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length320
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720880 vs. ExPASy Swiss-Prot
Match: Y1230_STAAN (Uncharacterized hydrolase SA1230 OS=Staphylococcus aureus (strain N315) GN=SA1230 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.702e-13
Identity = 43/104 (41.35%), Postives = 54/104 (51.92%), Query Frame = -3
Query:   16 HGCGHDGHTTMLLGAAQYLSTHRD---FDGTVVFIFQPAEEGGNAGARAMMQDGLFDKFPCDAVFGIHNMPGMPVNQFGFRAGPTMASSNRWDIVIKGVGGHAA 318
            H CGHDGHTT L+   Q     +D       VVFIFQPAEE G  GA  +++ G FDK+P +AVFGIH  P         R     AS+  +   + G+  H A
Sbjct:   90 HACGHDGHTTALMLFVQRCKDMQDAGQLPQNVVFIFQPAEETGG-GANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSHVA 192          
BLAST of EY720880 vs. ExPASy Swiss-Prot
Match: DAPL_GEOTN (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dapL PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.529e-13
Identity = 38/104 (36.54%), Postives = 57/104 (54.81%), Query Frame = -3
Query:    7 HGCGHDGHTTMLLGAAQYLSTHRDFDGTVVFIFQPAEEGGNAGARAMMQDGLFDKFPCDAVFGIHNMPGMPVNQFGFRAGPTMASSNRWDIVIKGVGGHAAQPH 318
            H CGHD H ++ LG   + + H      ++FIFQPAEEG   GA+ M++  +  ++  D +  +H  P  PV     + G   A+++   I +KG GGHAA PH
Sbjct:   93 HACGHDVHMSIALGVLTHFA-HNPIRDDLLFIFQPAEEGPG-GAKPMLESDIMREWKPDMIVALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPH 194          
BLAST of EY720880 vs. ExPASy Swiss-Prot
Match: DAPL_GEOKA (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus kaustophilus GN=dapL PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.529e-13
Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = -3
Query:    7 HGCGHDGHTTMLLGAAQYLSTHRDFDGTVVFIFQPAEEGGNAGARAMMQDGLFDKFPCDAVFGIHNMPGMPVNQFGFRAGPTMASSNRWDIVIKGVGGHAAQPH 318
            H CGHD H ++ LG   + + H      ++F+FQPAEEG   GA+ M++  +  ++  D +  +H  P  PV     + G   A+++   I +KG GGHAA PH
Sbjct:   93 HACGHDVHMSIALGVLTHFA-HHPLKDDLLFVFQPAEEGPG-GAKPMLESDIMREWKPDIIVALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPH 194          
BLAST of EY720880 vs. ExPASy Swiss-Prot
Match: DAPL_BACHD (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus halodurans GN=dapL PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.529e-13
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = -3
Query:    7 HGCGHDGHTTMLLGAAQYLSTHRDFDGTVVFIFQPAEEGGNAGARAMMQDGLFDKFPCDAVFGIHNMPGMPVNQFGFRAGPTMASSNRWDIVIKGVGGHAAQPH 318
            H CGHD H T+  G  ++ + H+  +  ++FIFQPAEEG   GA+ M+    F  +  D +  +H  P  PV     R G   A+++   I +KG GGHAA PH
Sbjct:   91 HACGHDLHMTIAFGLLRHFAYHQP-ETHLLFIFQPAEEGPG-GAKPMLDSEEFRMWWPDEIIALHIAPEYPVGTIATRKGLLFANTSELFIDLKGQGGHAAYPH 192          
BLAST of EY720880 vs. ExPASy Swiss-Prot
Match: DAPL_LISW6 (Putative N-acetyldiaminopimelate deacetylase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dapL PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.609e-13
Identity = 38/104 (36.54%), Postives = 58/104 (55.77%), Query Frame = -3
Query:    7 HGCGHDGHTTMLLGAAQYLSTHRDFDGTVVFIFQPAEEGGNAGARAMMQDGLFDKFPCDAVFGIHNMPGMPVNQFGFRAGPTMASSNRWDIVIKGVGGHAAQPH 318
            H CGHD H ++ LG   + ++    D  ++F+FQPAEEG   GA+ +M+   F  +  D ++G+H  P   V +   + G   A+++   I  KG GGHAA PH
Sbjct:   91 HACGHDLHMSIALGVLTHFASKPAKDN-LLFVFQPAEEGPG-GAKPIMESEEFAAWRPDTIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPH 192          
BLAST of EY720880 vs. ExPASy Swiss-Prot
Match: DAPL_BACCN (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dapL PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.609e-13
Identity = 41/104 (39.42%), Postives = 56/104 (53.85%), Query Frame = -3
Query:    7 HGCGHDGHTTMLLGAAQYLSTHRDFDGTVVFIFQPAEEGGNAGARAMMQDGLFDKFPCDAVFGIHNMPGMPVNQFGFRAGPTMASSNRWDIVIKGVGGHAAQPH 318
            H CGHD HTT+ LG        R  D  +VF+FQPAEEG   GA  M++     ++  + + G+H  P  PV     + G   A+++   I +KG GGHAA PH
Sbjct:   92 HACGHDFHTTIGLGLLTATVNDR-IDDDLVFLFQPAEEGPG-GALPMLESEELKEWKPNMILGLHIAPEYPVGTIATKEGLLFANTSELYIDLKGKGGHAAYPH 193          
BLAST of EY720880 vs. ExPASy Swiss-Prot
Match: Y1513_STAHJ (Uncharacterized hydrolase SH1513 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1513 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.020e-13
Identity = 44/105 (41.90%), Postives = 56/105 (53.33%), Query Frame = -3
Query:   16 HGCGHDGHTTMLLGAAQYLSTHRDFDGT----VVFIFQPAEEGGNAGARAMMQDGLFDKFPCDAVFGIHNMPGMPVNQFGFRAGPTMASSNRWDIVIKGVGGHAA 318
            H CGHDGHTT L+   +      D  GT    VVFIFQPAEE G  GA  +++ G F+ +P +AVFGIH  P     Q   R     AS+  +   +KG+  H A
Sbjct:   90 HACGHDGHTTALMLFVKRCKEMFD-KGTLPHNVVFIFQPAEETGG-GANRLIKAGAFNNYPIEAVFGIHVNPFADEGQVVIRDEEITASATEYRFFLKGLSSHVA 192          
BLAST of EY720880 vs. ExPASy Swiss-Prot
Match: DAPL_LACCB (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus casei (strain BL23) GN=dapL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.020e-13
Identity = 36/103 (34.95%), Postives = 50/103 (48.54%), Query Frame = -3
Query:   10 HGCGHDGHTTMLLGAAQYLSTHRDFDGTVVFIFQPAEEGGNAGARAMMQDGLFDKFPCDAVFGIHNMPGMPVNQFGFRAGPTMASSNRWDIVIKGVGGHAAQP 318
            H CGHD H T+ LG   Y + H+  D  ++F FQPAEE  N G  A         +  D  +G+H+ P +P      R G   A +   ++ + G  GHAA P
Sbjct:   95 HACGHDIHMTVALGILSYFAEHQPKDN-LIFFFQPAEESKNGGKLAYDMGAFTGDWHIDEFYGLHDRPDLPAGTISTRLGTLFAGTTEINVDLIGKSGHAALP 196          
BLAST of EY720880 vs. ExPASy Swiss-Prot
Match: DAPL_LACC3 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus casei (strain ATCC 334) GN=dapL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.020e-13
Identity = 36/103 (34.95%), Postives = 50/103 (48.54%), Query Frame = -3
Query:   10 HGCGHDGHTTMLLGAAQYLSTHRDFDGTVVFIFQPAEEGGNAGARAMMQDGLFDKFPCDAVFGIHNMPGMPVNQFGFRAGPTMASSNRWDIVIKGVGGHAAQP 318
            H CGHD H T+ LG   Y + H+  D  ++F FQPAEE  N G  A         +  D  +G+H+ P +P      R G   A +   ++ + G  GHAA P
Sbjct:   95 HACGHDIHMTVALGILSYFAEHQPKDN-LIFFFQPAEESKNGGKLAYDMGAFTGDWHIDEFYGLHDRPDLPAGTISTRLGTLFAGTTEINVDLIGKSGHAALP 196          
BLAST of EY720880 vs. ExPASy Swiss-Prot
Match: DAPL_GEOSW (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus sp. (strain WCH70) GN=dapL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.020e-13
Identity = 39/104 (37.50%), Postives = 57/104 (54.81%), Query Frame = -3
Query:    7 HGCGHDGHTTMLLGAAQYLSTHRDFDGTVVFIFQPAEEGGNAGARAMMQDGLFDKFPCDAVFGIHNMPGMPVNQFGFRAGPTMASSNRWDIVIKGVGGHAAQPH 318
            H CGHD H ++ LG   + + H   D  ++FIFQPAEEG   GA+ M++  +   +  D +  +H  P  PV     + G   A+++   I +KG GGHAA PH
Sbjct:   93 HACGHDVHMSIALGLLTHFAEHPIQDD-LLFIFQPAEEGPG-GAKPMLESEIMKVWKPDMILALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPH 194          
The following BLAST results are available for this feature:
BLAST of EY720880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
Y1230_STAAN2.702e-1341.35Uncharacterized hydrolase SA1230 OS=Staphylococcus... [more]
DAPL_GEOTN3.529e-1336.54Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_GEOKA3.529e-1335.58Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_BACHD3.529e-1338.46Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_LISW64.609e-1336.54Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_BACCN4.609e-1339.42Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
Y1513_STAHJ6.020e-1341.90Uncharacterized hydrolase SH1513 OS=Staphylococcus... [more]
DAPL_LACCB6.020e-1334.95Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACC36.020e-1334.95Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_GEOSW6.020e-1337.50Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-E11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720880 ID=EY720880; Name=EY720880; organism=Citrus sinensis; type=EST; length=320bp
CGATGCATGCGGCTGCGCGGCGTGGCCGCCCACGCCCTTGATGACGATGT
CCCAGCGGTTGCTCGAGGCCATGGTGGGGCCGGCGCGGAAACCGAACTGA
TTGACCGGCATGCCGGGCATGTTGTGGATGCCGAACACCGCGTCACAGGG
GAATTTGTCGAACAGGCCGTCCTGCATCATGGCGCGCGCGCCGGCGTTGC
CGCCCTCCTCGGCCGGCTGGAAGATGAACACCACGGTGCCGTCGAAATCG
CGATGCGTGGACAGGTATTGCGCCGCGCCCAGCAGCATCGTGGTGTGGCC
ATCGTGGCCGCAGCCGTGCA
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