DR404105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO_STAEQ (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trxA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.196e-14 Identity = 32/84 (38.10%), Postives = 57/84 (67.86%), Query Frame = 2 Query: 347 LVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVL 598 LV+F+A+WCGPC+M+ V++E+AG+Y G+ ++ D + + A YE+ ++P +++FK+GE + VVG PKE +++ L Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO_RHOSH (Thioredoxin OS=Rhodobacter sphaeroides GN=trxA PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 4.196e-14 Identity = 34/94 (36.17%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 284 SRAVVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPK 565 S VT +++ + SD PV+V+F+A WCGPCR + ++E++ EYAG+++ VN D + ++ +P + LFKNG+ VG PK Sbjct: 2 STVPVTDATFDTEVRKSDVPVVVDFWAEWCGPCRQIGPALEELSKEYAGKVKIVKVNVDENPESPAMLGVRGIPALFLFKNGQVVSNKVGAAPK 95
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO_STAHJ (Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=trxA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 31/84 (36.90%), Postives = 57/84 (67.86%), Query Frame = 2 Query: 347 LVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVL 598 LV+F+A+WCGPC+M+ V++E+AG+Y G+ ++ D + + A +E+ ++P +++FK+GE + VVG PKE +++ L Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO2_SHIFL (Thioredoxin-2 OS=Shigella flexneri GN=trxC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.720e-13 Identity = 28/81 (34.57%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 323 ILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPK 565 +L D PV+++F+A WCGPCR + +++A E +G++R VNT+ + ++ + I+++P +++FKNG+ + + G +PK Sbjct: 48 LLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPK 128
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO2_ECOLI (Thioredoxin-2 OS=Escherichia coli (strain K12) GN=trxC PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.720e-13 Identity = 28/81 (34.57%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 323 ILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPK 565 +L D PV+++F+A WCGPCR + +++A E +G++R VNT+ + ++ + I+++P +++FKNG+ + + G +PK Sbjct: 48 LLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPK 128
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO2_ECOL6 (Thioredoxin-2 OS=Escherichia coli O6 GN=trxC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.720e-13 Identity = 28/81 (34.57%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 323 ILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPK 565 +L D PV+++F+A WCGPCR + +++A E +G++R VNT+ + ++ + I+++P +++FKNG+ + + G +PK Sbjct: 48 LLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPK 128
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO2_ECO57 (Thioredoxin-2 OS=Escherichia coli O157:H7 GN=trxC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.720e-13 Identity = 28/81 (34.57%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 323 ILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPK 565 +L D PV+++F+A WCGPCR + +++A E +G++R VNT+ + ++ + I+++P +++FKNG+ + + G +PK Sbjct: 48 LLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPK 128
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO_STRCL (Thioredoxin OS=Streptomyces clavuligerus GN=trxA PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 33/90 (36.67%), Postives = 56/90 (62.22%), Query Frame = 2 Query: 296 VTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPK 565 VT D++E +L S+ PVLV+F+A WCGPCR + ++ I E+ G++ +N D + A Y + ++P + +++ GE +T+VG PK Sbjct: 8 VTDDTFEADVLKSEKPVLVDFWAEWCGPCRQIAPSLEAIT-EHGGQIEIVKLNIDQNPATAAKYGVMSIPTLNVYQGGEVVKTIVGAKPK 96
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO_STAAW (Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 30/84 (35.71%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 347 LVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVL 598 LV+F+A+WCGPC+M+ V++E+A +Y G+ ++ D + + A YE+ ++P +++FK+G+ + VVG PKE +++ L Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO_STAAU (Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 30/84 (35.71%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 347 LVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVL 598 LV+F+A+WCGPC+M+ V++E+A +Y G+ ++ D + + A YE+ ++P +++FK+G+ + VVG PKE +++ L Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104 The following BLAST results are available for this feature:
BLAST of DR404105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404105 ID=DR404105; Name=DR404105; organism=Citrus sinensis; type=EST; length=758bpback to top |