DR404103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20 Identity = 53/153 (34.64%), Postives = 84/153 (54.90%), Query Frame = 2 Query: 125 RLMRDFKRLQQDPPAGIS---------GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 544 R+ ++ K L DPP G S G+ + +A I GP+DT + G F L +Q E YP +PP V F + ++HPNI G ICLDIL + W P +++ +LTS++ LL +PNP+ E +R + N++ ++ + RE+ E+ Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEK 162
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 48/149 (32.21%), Postives = 87/149 (58.39%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 544 M++P+K+R M K + D ++++ ++ GP D+ + GG +K+ ++ E YP K P+V FV++++HPN+ + G++CLD++ WSP++D+ + S + LL PNP+ P N EAA L ++ Y +V+E E+ Sbjct: 1 MASPSKRREMDMMKLMMSDYKVDTV----NDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEK 145
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.208e-20 Identity = 49/149 (32.89%), Postives = 87/149 (58.39%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 544 MS+P+K+R M K + D + ++ + + GP D+ ++GG +K+ ++ + YP K P+V F+++++HPN+ GS+CLD++ WSP++D+ + T + LL PNP+ P N EAA L ++ Y +RV+E E+ Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEMI----NDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEK 145
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.208e-20 Identity = 50/149 (33.56%), Postives = 84/149 (56.38%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 544 MS+P+K+R M K + D + +N GP D+ + GG +K+ ++ + YP K P+V F+++++HPN+ GS+CLD++ WSP++D+ + T + LL PNP+ P N EAA L ++ Y +RV+E E+ Sbjct: 1 MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFN----GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEK 145
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.208e-20 Identity = 49/133 (36.84%), Postives = 79/133 (59.40%), Query Frame = 2 Query: 131 MRDFKRLQQD--------PPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 502 M DF R+Q++ +GI P+ +N+ I GP TP++GGTF++ + + YP +PP ++F ++++HPNI + G+ICLDIL++QWSP + L SIQ+LL P P P ++ A + +N Sbjct: 1 MIDFSRIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKN 133
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.177e-20 Identity = 50/149 (33.56%), Postives = 83/149 (55.70%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 544 MS+P+K+R M K + D + + ++ GP D+ + GG +K+ ++ TE YP K P++ F ++++HPN+ GS+CLD++ WSP++D+ I + LL PNP+ P N EAA L +K Y +V+E E+ Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFH----GPKDSIYQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCER 145
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 52/142 (36.62%), Postives = 77/142 (54.23%), Query Frame = 2 Query: 116 AKKRLMRDFKRLQQDPPAGI----SGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 529 A+ RL RD L P + S D + VI PD+ ++ G+ L F E YP +PP V + ++FHPNI G++CL+IL+ WSP D+ +I+T + L +PNPN P N +AA+L E ++E+ VR Sbjct: 28 ARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVR 169
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19 Identity = 49/146 (33.56%), Postives = 82/146 (56.16%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAG---ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 529 M+ A +R+ R+FK + + I D N I GP DTP++GG ++L ++ E YP PP VRF+++++HPNI + G+ICLDIL++QW+ + +L S+Q+LL P+ P ++ A + +N + + R Sbjct: 1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTAR 146
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19 Identity = 49/146 (33.56%), Postives = 82/146 (56.16%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAG---ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 529 M+ A +R+ R+FK + + I D N I GP DTP++GG ++L ++ E YP PP VRF+++++HPNI + G+ICLDIL++QW+ + +L S+Q+LL P+ P ++ A + +N + + R Sbjct: 1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTAR 146
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19 Identity = 49/146 (33.56%), Postives = 82/146 (56.16%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAG---ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 529 M+ A +R+ R+FK + + I D N I GP DTP++GG ++L ++ E YP PP VRF+++++HPNI + G+ICLDIL++QW+ + +L S+Q+LL P+ P ++ A + +N + + R Sbjct: 1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTAR 146 The following BLAST results are available for this feature:
BLAST of DR404103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404103 ID=DR404103; Name=DR404103; organism=Citrus sinensis; type=EST; length=680bpback to top |