DR404103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 41/122 (33.61%), Postives = 74/122 (60.66%), Query Frame = 2 Query: 224 FGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD*KSNESTG 583 +GP TP++GG +K+ + + YP K P++ F++++FHPNI A G++CLD++ W+ +YD+ I S + LL PNP P N +AA ++ EY ++++E +++ T + + G Sbjct: 39 YGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEALKEQEEG 160
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 41/122 (33.61%), Postives = 74/122 (60.66%), Query Frame = 2 Query: 224 FGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD*KSNESTG 583 +GP TP++GG +K+ + + YP K P++ F++++FHPNI A G++CLD++ W+ +YD+ I S + LL PNP P N +AA ++ EY ++++E +++ T + + G Sbjct: 39 YGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEALKEQEEG 160
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 41/122 (33.61%), Postives = 74/122 (60.66%), Query Frame = 2 Query: 224 FGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD*KSNESTG 583 +GP TP++GG +K+ + + YP K P++ F++++FHPNI A G++CLD++ W+ +YD+ I S + LL PNP P N +AA ++ EY ++++E +++ T + + G Sbjct: 39 YGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEALKEQEEG 160
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 43/142 (30.28%), Postives = 83/142 (58.45%), Query Frame = 2 Query: 107 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 532 ++ A+ R+ +D L P + P N+++ + +I PD+ + G F + +YP++PP V+ ++++HPNI DG++CL+IL+ W+P+ ++ +I+ +Q L +PNP P N EAA + N+R++ V++ Sbjct: 24 ASAAQLRIQKDINELNL-PNTCATDFPDPNDLLNFKLII-SPDEGFYRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVKK 163
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19 Identity = 43/142 (30.28%), Postives = 78/142 (54.93%), Query Frame = 2 Query: 107 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 532 + PA+ R +D ++ P G + + +D N +L + P D + TF+ T+ YP PP V + ++HPNI +G +CL+IL+ W P+ ++ ++ + +L +PNP+ P N +AA+L +NK+ + VR+ Sbjct: 75 ANPAELRAQKDIDEMEV--PTGCAVSFKDTNDILNFNLSITPTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVRQ 214
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18 Identity = 51/140 (36.43%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 122 KRLMRDFKRLQQDPPAGIS--GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLF-SENKREYNRRVR 529 KRL +++ Q +G+ D ++ W AVI GP +TP++GG + L + E YP PP+V F +++ HPNI + +G +C+DIL+ WSP + + + +I SLL + + +SP N +AA+L + +K YN VR Sbjct: 6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVR 145
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18 Identity = 44/136 (32.35%), Postives = 77/136 (56.62%), Query Frame = 2 Query: 179 GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 544 G+ ++ + +W+ D+ + G K ++F YP +PPT++FVS+MFHPNIY DG +C+ IL+ ++W+P+ ++ I+ SI +L PN +SPAN +A+ ++ +N EY + V I + Sbjct: 58 GSMENRDYKVWDIYFTLGGDSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEYIKEVIRIARE 193
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2U_MACFA (Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis GN=UBE2U PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18 Identity = 48/132 (36.36%), Postives = 78/132 (59.09%), Query Frame = 2 Query: 128 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREY 514 L RDF L+++ GI+ P ++M W I G ++ W G F+LT+ FT +Y PP V+FV+ FHPN+ G C+D L N +W+ Y +++IL ++Q +L +P +P N EAAR+ ++++ Y Sbjct: 9 LQRDFYDLKENNYKGITARPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFVTIPFHPNVDPHTGQPCIDFLDNPKKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILTKDESLY 140
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18 Identity = 64/204 (31.37%), Postives = 101/204 (49.51%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPP---AGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTV---------------RFVSRMFHPNIYAD-GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD*KS------NESTGRLCCRNKR*KLGLVWLVCS 640 MS A R+ R K + AGI ++NN+M I GP+ TP+ GGTF++ + E YP +PP V +FV+R++HPNI + G+ICLDIL+++W+ + +L S+Q++LC P P+ P ++ A+ F N + + S+ A+ K N GRL R +V+L C+ Sbjct: 15 MSNLALARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFT--ATAVYWTSYFANSKKDVEPDFNRKVGRLIEMGIRETEAIVYLSCN 216
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 42/140 (30.00%), Postives = 79/140 (56.43%), Query Frame = 2 Query: 110 TPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 529 T A+ R+ +D L P + P +IM + + PD+ + GG F+ + ++P++PP V+ + +++HPNI +G++CL+IL+ W P+ + A++ +Q L +PN + P N +AA + N+ E+ R V+ Sbjct: 23 TAAQLRVQKDLSELSL-PSTMKTHFPSAEDIMNFELTV-RPDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNVK 160 The following BLAST results are available for this feature:
BLAST of DR404103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR404103 ID=DR404103; Name=DR404103; organism=Citrus sinensis; type=EST; length=680bpback to top |