DR404103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.323e-15 Identity = 40/135 (29.63%), Postives = 71/135 (52.59%), Query Frame = 2 Query: 125 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 529 RL +D L IS N++M + I PD+ + G F + Q + YP++ P V+ ++++HPNI +G++CL+IL+ W P+ ++ ++ + L +PN P N EAA + +N + + VR Sbjct: 35 RLHKDISELNLPKSCKISFPNGKNDLMNFEVTI-KPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVR 168
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 116 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFV--SRMFHPNIYADGSICL---DILQNQWSPIYDVAAILTSIQSLL 442 A KRL +++K + ++PP I P ++NI+ W+ +I GP DTP+ GG + TL F DYP KPP +R + + F PN +CL D + W+P + V+ IL + S + Sbjct: 6 AHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKPNT----RLCLSMSDYHPDTWNPGWSVSTILNGLLSFM 115
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2W_DANRE (Probable ubiquitin-conjugating enzyme E2 W OS=Danio rerio GN=ube2w PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.549e-14 Identity = 46/137 (33.58%), Postives = 70/137 (51.09%), Query Frame = 2 Query: 119 KKRLMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF--HPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL--CDPNPNSPANSEAARLFSENKRE 511 +KRL ++ LQ DPPAG ++ N I W + G T ++G F+L +F+ YP + P V F HP++Y++G ICL IL WSP V ++ SI S+L C P NS + ++N ++ Sbjct: 5 QKRLQKELLALQNDPPAGMTLNERSVQNTITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVKTCNKNPKK 141
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC12_ASHGO (NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii GN=UBC12 PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 38/128 (29.69%), Postives = 72/128 (56.25%), Query Frame = 2 Query: 107 STPAKKRLMRDFKRLQQDPPAGISGA--PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAA 484 ++PA+ R+ +D L+ + +N + L P++ + GG F+ ++ F + YP +PPTV+ ++ ++HPNI G+ICL++L+ WSP+ D+ ++ + L +PN + P N +AA Sbjct: 28 ASPAQLRVEKDLATLELPTTVTLDTKCLGSENKVYLR----ISPEEGVYRGGHFRFSVVFRDTYPIEPPTVKCLNTIYHPNIDYSGNICLNVLREDWSPVMDLQTVVLGLLFLFLEPNGSDPLNRQAA 151
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 46/137 (33.58%), Postives = 69/137 (50.36%), Query Frame = 2 Query: 119 KKRLMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF--HPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL--CDPNPNSPANSEAARLFSENKRE 511 +KRL ++ LQ DPP G ++ N+I W + G T ++G F+L +F+ YP P V F HP++Y++G ICL IL WSP V ++ SI S+L C P NS R ++N ++ Sbjct: 5 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTCNKNPKK 141
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 46/137 (33.58%), Postives = 69/137 (50.36%), Query Frame = 2 Query: 119 KKRLMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF--HPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL--CDPNPNSPANSEAARLFSENKRE 511 +KRL ++ LQ DPP G ++ N+I W + G T ++G F+L +F+ YP P V F HP++Y++G ICL IL WSP V ++ SI S+L C P NS R ++N ++ Sbjct: 5 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTCNKNPKK 141
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 2 Query: 101 TMSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL 442 T+S A RL ++ Q +PP G DN + W + G T + T++L + F E YP + P V F+ HP+IY++G ICLDIL + WSP V++I SI S+L Sbjct: 11 TLSKIATNRLQKELVEWQMNPPTGFKHKVTDN-LQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 46/127 (36.22%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL-CDPNPNSPANSE 478 +S A RL ++ Q +PP G DN + W + G T + T++L ++F E YP + P V FVS HP+IY++G ICLDIL + WSP V ++ SI S+L P PA+++ Sbjct: 12 LSKIACNRLQKELSEWQLNPPTGFRHKVTDN-LQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSSSPAKQRPADND 137
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 41/117 (35.04%), Postives = 62/117 (52.99%), Query Frame = 2 Query: 107 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLL 442 S A KRL +++K + +PP I AP ++NI+ W+ VI GP TP++ G + TL F DYP PP +R ++ PN + +CL D W+P + V IL + S + Sbjct: 3 SIQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMIT----PNGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFM 115
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC6_SCHPO (Ubiquitin-conjugating enzyme E2 6 OS=Schizosaccharomyces pombe GN=ubc6 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 43/117 (36.75%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 107 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFV--SRMFHPNIYADGSICL---DILQNQWSPIYDVAAILTSIQSLL 442 S A KRLM+++ LQ++P + P NI+ W+ +I GP DTP++GG + TL F DYP KPP +R + S F N +CL D W+P + V+ IL + S + Sbjct: 3 SKGAYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITPSGRFQTNT----RLCLSFSDFHPKSWNPSWMVSTILVGLVSFM 115 The following BLAST results are available for this feature:
BLAST of DR404103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404103 ID=DR404103; Name=DR404103; organism=Citrus sinensis; type=EST; length=680bpback to top |