DR404103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC33_ARATH (Probable ubiquitin carrier protein E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 41/134 (30.60%), Postives = 69/134 (51.49%), Query Frame = 2 Query: 122 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKR 508 KRL ++++ L ++P + + P N+I+ W+ V+ G + TP+ GG + ++F +YP KPP + M PN ICL D W+P++ V++ILT + S + D NSP +E +R Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGI----TMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMD---NSPTTGSVNTSVAEKQR 134
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: BIRC6_HUMAN (Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 48/167 (28.74%), Postives = 77/167 (46.11%), Query Frame = 2 Query: 95 NATMSTPAKKRLMRDFKRLQQDPPAGISGAP----QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFV-----SRMFHPNIYADGSICLDIL-------QNQWSP-IYDVAAILTSIQSLL--CDPNPNSPA--NSEAARLFSENKREYNRRVRE 532 N S +RL ++ L P S + + + + +I GP DTP+ G F+ + F +DYP+ PP V S F+PN+Y DG +CL IL + +W+P +L S+QSL+ +P N P S +++ REY+ +R+ Sbjct: 4539 NDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQ 4705
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC26_ARATH (Probable ubiquitin carrier protein E2 26 OS=Arabidopsis thaliana GN=UBC26 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 46/148 (31.08%), Postives = 75/148 (50.68%), Query Frame = 2 Query: 122 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS--RMFHPNIYADGSICLDIL-------QNQWSPIYD-VAAILTSIQSLLCDPNP--NSPANSEAA---------RLFSEN 502 K++ D+K L+ D P IS ++ + L AVI G + TP+ G F +QF + YP+ PP V + S +PN+Y G +CL +L + +W P + +L SIQ+L+ + P N P ++A +++SEN Sbjct: 274 KKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQSAGTASGESKSKVYSEN 421
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2F_XENTR (NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 39/146 (26.71%), Postives = 73/146 (50.00%), Query Frame = 2 Query: 128 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ------WSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARLFSENKREYNRRVREIVEQ 544 L+++ L+ + P D N + + + PD++ + GG F+ ++ + Y PP V+ ++R++HPNI G ICL +L+ W+P + ++ + SL D N + P N EAA +K EY +V + +++ Sbjct: 37 LVKEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKR 182
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 39/146 (26.71%), Postives = 73/146 (50.00%), Query Frame = 2 Query: 128 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ------WSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARLFSENKREYNRRVREIVEQ 544 L+++ L+ + P D N + + + PD++ + GG F+ ++ + Y PP V+ ++R++HPNI G ICL +L+ W+P + ++ + SL D N + P N EAA +K EY +V + +++ Sbjct: 37 LVKEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKR 182
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBCX_YEAST (Ubiquitin-conjugating enzyme E2-21 kDa OS=Saccharomyces cerevisiae GN=PEX4 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 31/103 (30.10%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 191 DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFV-SRMFHPNI-YADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARL 490 + ++ W A+I GP DTP++ F++ ++ YP PP + F+ + + H N+ A G ICL+IL+ +W+P++D+ + ++ LL +P +SP + + + Sbjct: 55 ETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNI 157 The following BLAST results are available for this feature:
BLAST of DR404103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404103 ID=DR404103; Name=DR404103; organism=Citrus sinensis; type=EST; length=680bpback to top |