DR404096

Overview
NameDR404096
Unique NameDR404096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length444
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7736 contig Csv1_Contig7736:949..1391. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 9.459e-13
Identity = 34/36 (94.44%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  475 GTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 9.459e-13
Identity = 34/36 (94.44%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  475 GTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.459e-13
Identity = 34/36 (94.44%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  475 GTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.752e-12
Identity = 32/36 (88.89%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  476 GTPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 2.752e-12
Identity = 32/36 (88.89%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  476 GTPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511
The following BLAST results are available for this feature:
BLAST of DR404096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
INO1_ORYSJ9.459e-1394.44Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_MAIZE9.459e-1394.44Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_HORVU9.459e-1394.44Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_PHAVU2.752e-1288.89Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH2.752e-1288.89Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245E08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404096 ID=DR404096; Name=DR404096; organism=Citrus sinensis; type=EST; length=444bp
GGGGGCACACCAGTGGTGAATGCGCTGTCGAAGCAGCGTGCAATGCTTGA
GAACATTCTGAGGGCTTGCGTTGGCTTGGCTCCTGAGAACAACATGATTT
TGGAATACAAGTGAAGAACTTGCAGGGGAGAAAAGTGGAAGAACCGGTTT
TCCCTTTCTCTGTCACCAATCAAAGCTGTGGTGGTCCATTTAATTACTGA
TTGTAATGTCTTGTGTCATGAAATTGTGGTTAATATTAGTGTGTCCTGTA
TGTTTGCTCTTTTATTTTTTTAATGAAGGTGCTGGAGTGTAGCCCATTGC
CTTTGTAGCTCATTTCGGAGCATGAAATCTCTTGTATTGCAAGTAGATAA
TATATGGAAGTTCATAAATAACTGTATTGCGGCAAATTTGAATCTCATCT
AAATCCTTACTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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