CX069885

Overview
NameCX069885
Unique NameCX069885
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_BRANA (Profilin OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.576e-42
Identity = 84/123 (68.29%), Postives = 95/123 (77.24%), Query Frame = -1
Query:  282 MCDI---DGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCD+    GHHL +AAI GHDGSVWAQS+NFPQFK +E A IMKDF+EPG LAPTGL L G KYMVIQGEPGAVIR             GQ+ +FGIY+EP+TPGQCNM+VERLGDYLI+Q L
Sbjct:   12 MCDVGDGQGHHLAAAAIFGHDGSVWAQSANFPQFKGQEFANIMKDFDEPGHLAPTGLFLAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLIEQDL 134          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF2_TOBAC (Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.576e-42
Identity = 83/122 (68.03%), Postives = 97/122 (79.51%), Query Frame = -1
Query:  285 MCDIDG---HHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 641
            M DI+G   +HL +AAI+G+DGSVWAQS+ FP+FKPEEI  IMKDF+EPG LAPTGL LGG KYMVIQGEPGAVIR              QALIFGIY+EP+TPGQCNM+VE++GDYL+DQG
Sbjct:   12 MADIEGQQGNHLAAAAILGNDGSVWAQSTTFPKFKPEEITNIMKDFDEPGHLAPTGLFLGGAKYMVIQGEPGAVIRGKKGSGGITIKKTNQALIFGIYEEPVTPGQCNMVVEKIGDYLVDQG 133          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF3_AMBAR (Profilin-3 OS=Ambrosia artemisiifolia GN=D03 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.510e-42
Identity = 81/122 (66.39%), Postives = 97/122 (79.51%), Query Frame = -1
Query:  282 MCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDI+G  HHLTSAAI+GHDG+VWAQSSNFPQFKPEE+  I+ +F++ G+LAPTG+ + G KYMV+QGE GAVIR             GQAL+ GIYDEP+ PGQCNM+VERLGDYLIDQG+
Sbjct:   12 MCDIEGTGHHLTSAAILGHDGTVWAQSSNFPQFKPEEMKGIITEFDQAGTLAPTGMFIAGAKYMVLQGEQGAVIRGKKGAGGICIKKTGQALVMGIYDEPVAPGQCNMVVERLGDYLIDQGM 133          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF3_TOBAC (Profilin-3 OS=Nicotiana tabacum GN=PRO3 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.334e-41
Identity = 79/114 (69.30%), Postives = 91/114 (79.82%), Query Frame = -1
Query:  285 GHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 626
            G HL +AAI+GHDGSVWAQS +FP+FKPEEI  IMKDF+EPG LAPTGL L G KYMVIQGEPGAVIR              QALIFG+Y+EP+TPGQCNM+VE++GDYL+DQG
Sbjct:   19 GQHLAAAAILGHDGSVWAQSPHFPKFKPEEITNIMKDFDEPGFLAPTGLFLAGIKYMVIQGEPGAVIRGKKGSGGITIKKTNQALIFGLYEEPVTPGQCNMVVEKIGDYLVDQG 132          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF1_PARJU (Profilin-1 OS=Parietaria judaica GN=PRO1 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.334e-41
Identity = 82/121 (67.77%), Postives = 94/121 (77.69%), Query Frame = -1
Query:  282 MCDI-DGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCD+ DG+   SAAI+GHDGSVWAQS+NFPQ KPEE+  IM DF E G LAPTGL LGGTKYMVIQGE GAVIR             GQA++ GIYDEP+TPGQCN++VERLGDYL++QGL
Sbjct:   12 MCDVGDGNTPASAAIIGHDGSVWAQSANFPQLKPEEVTGIMNDFNEAGFLAPTGLFLGGTKYMVIQGESGAVIRGKKGSGGATLKKTGQAIVIGIYDEPMTPGQCNLVVERLGDYLLEQGL 132          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF1_ARATH (Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.972e-41
Identity = 80/120 (66.67%), Postives = 92/120 (76.67%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCD++G+HLT+AAI+G DGSVWAQS+ FPQ KP+EI  I KDFEEPG LAPTGL LGG KYMVIQGE GAVIR              QAL+FG YDEP+T GQCN++VERLGDYLI+  L
Sbjct:   12 MCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF2_ARATH (Profilin-2 OS=Arabidopsis thaliana GN=PRO2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.881e-41
Identity = 81/120 (67.50%), Postives = 91/120 (75.83%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MC+++G+HLT AAI G DGSVWAQSS FPQ KP EIA I KDFEE G LAPTGL LGG KYMV+QGE GAVIR              QAL+FGIYDEP+T GQCN++VERLGDYLI+ GL
Sbjct:   12 MCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHLAPTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVERLGDYLIESGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF1_ARTVU (Profilin-1 OS=Artemisia vulgaris PE=1 SV=3)

HSP 1 Score: 166.007 bits (419), Expect = 1.475e-40
Identity = 81/122 (66.39%), Postives = 95/122 (77.87%), Query Frame = -1
Query:  282 MCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDI+G   HLTSAAI G DG+VWA+S++FP+FKP EI AI+K+F E G LAPTGL LGG KYMVIQGE GAVIR             GQA++FGIYDEP+ PGQCNM+VERLGDYL+DQG+
Sbjct:   12 MCDIEGTGQHLTSAAIFGTDGTVWAKSASFPEFKPNEIDAIIKEFNEAGQLAPTGLFLGGAKYMVIQGEAGAVIRGKKGAGGICIKKTGQAMVFGIYDEPVAPGQCNMVVERLGDYLLDQGM 133          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF5_ARATH (Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.926e-40
Identity = 79/120 (65.83%), Postives = 90/120 (75.00%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCD+ G+ LT+AAI+G DGSVWAQS+NFPQ KPEEI  I  DF  PG+LAPTGL LGG KYMVIQGEP AVIR               AL+FGIYDEP+TPGQCNM+VE LG+YLI+ GL
Sbjct:   12 MCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTLAPTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVENLGEYLIESGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_HELAN (Profilin OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.291e-40
Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = -1
Query:  282 MCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDI+G   HLTSAAI+G DG+VWAQS+ FPQFKPEE+  I+K+F+E G+LAPTG+ + G KYMV+QGEPGAVIR             GQA+I GIYDEP+ PGQCNM+VERLGDYL++QG+
Sbjct:   12 MCDIEGTGQHLTSAAILGLDGTVWAQSAKFPQFKPEEMKGIIKEFDEAGTLAPTGMFIAGAKYMVLQGEPGAVIRGKKGAGGICIKKTGQAMIMGIYDEPVAPGQCNMVVERLGDYLLEQGM 133          
The following BLAST results are available for this feature:
BLAST of CX069885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
PROF_BRANA1.576e-4268.29Profilin OS=Brassica napus PE=2 SV=1[more]
PROF2_TOBAC1.576e-4268.03Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1[more]
PROF3_AMBAR3.510e-4266.39Profilin-3 OS=Ambrosia artemisiifolia GN=D03 PE=1 ... [more]
PROF3_TOBAC1.334e-4169.30Profilin-3 OS=Nicotiana tabacum GN=PRO3 PE=2 SV=1[more]
PROF1_PARJU1.334e-4167.77Profilin-1 OS=Parietaria judaica GN=PRO1 PE=1 SV=1[more]
PROF1_ARATH2.972e-4166.67Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV... [more]
PROF2_ARATH3.881e-4167.50Profilin-2 OS=Arabidopsis thaliana GN=PRO2 PE=1 SV... [more]
PROF1_ARTVU1.475e-4066.39Profilin-1 OS=Artemisia vulgaris PE=1 SV=3[more]
PROF5_ARATH1.926e-4065.83Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV... [more]
PROF_HELAN4.291e-4063.93Profilin OS=Helianthus annuus PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13E03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E03-I5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069885 ID=CX069885; Name=CX069885; organism=Citrus sinensis; type=EST; length=641bp
TTTTGAGTATCAACAGTATCCAAAGATTCAAATTCTTCAAAACTGCAATA
CACATAAATTAAGGAAACATGAAGGAATTGGGGATGAAAAAAAAAGATAA
AAAAGGAACCCTAAAGAACCAAAAGAGGCGGGAAAAAAAAAAATCACTCT
TGTCCTCACACAGTTATTTTTGCAGCAAACAAATTTATACTGCCAGTTCA
AGACCAAATATGGAAGAAGAGGCAAAGCCCGAAAACCAGAAAGCAATATA
TCGAAACCATTTGAAGTTGACATGGAATCTACAGGCCCTGATCAATGAGA
TAATCCCCCAACCTCTCAACGATCATGTTGCACTGTCCTGGAGTCAATGG
TTCATCGTATATACCAAAAATCAGGGCTTGGCCCGTTTTCTTGACGGTGA
CACCACCAGAACCCTTTTTTCCACGAATCACAGCTCCAGGCTCACCCTGG
ATTACCATGTACTTGGTGCCTCCAAGGTGCAAACCAGTTGGGGCAAGAGA
ACCGGGCTCTTCAAAATCTTTCATGATTGCAGCAATCTCTTCAGGCTTGA
ACTGAGGGAAATTGGAGCTCTGGGCCCAAACGCTGCCGTCGTGACCGACG
ATCGCAGCTGAGGTGAGATGATGGCCGTCGATATCGCACAT
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