DR404094

Overview
NameDR404094
Unique NameDR404094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_MALGO (Cytoplasmic tRNA 2-thiolation protein 1 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.121e-51
Identity = 92/139 (66.19%), Postives = 115/139 (82.73%), Query Frame = 2
Query:  233 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            R C  C   +A L+RPKT + +CR CF+ VFE E+HQ IV  QLF+ G+R+AIGASGGKDSTVLA+V+  LN R++YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QYG+PLK++ YK+LYGW+MD+IV  IG KNNCT
Sbjct:    3 RECELCGTERAVLRRPKTGDLVCRACFFHVFETEVHQTIVEAQLFRRGDRVAIGASGGKDSTVLAYVMKTLNERYDYGLNLFLLSIDEGITGYRDDSLETVKRNQEQYGIPLKVLGYKELYGWSMDDIVASIGRKNNCT 141          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_LACBS (Cytoplasmic tRNA 2-thiolation protein 1 OS=Laccaria bicolor (strain S238N-H82) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.912e-51
Identity = 94/137 (68.61%), Postives = 112/137 (81.75%), Query Frame = 2
Query:  239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            C+ C + KA +KRPKT EQICRECF+ VFE E+H  I    LFK G+R+AIGASGGKDSTVLA+V+  LN R+ YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SY +LYGWTMD IV  +G KNNCT
Sbjct:    6 CAICQKAKAMVKRPKTGEQICRECFFYVFETEVHNTITQANLFKPGDRVAIGASGGKDSTVLAYVMKMLNERYQYGLELFLLSIDEGITGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVSQVGRKNNCT 142          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_PICGU (Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia guilliermondii GN=NCS6 PE=3 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.497e-51
Identity = 96/148 (64.86%), Postives = 117/148 (79.05%), Query Frame = 2
Query:  206 ESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            E K +K    LC  C+Q KA +KRPK L+++C+ECFY VFE EIH  IV  QLFK G+++AIGASGGKDSTVLA VL  LN ++NYGL L LLSIDEGI GYRDDSL TVKRN+IQY +PL+I+SYKDLY W+MDEIV   G++++CT
Sbjct:    3 EKKIRKV--TLCDICHQSKAVMKRPKNLQKLCKECFYHVFETEIHNTIVDAQLFKPGDKVAIGASGGKDSTVLASVLKTLNEKYNYGLTLVLLSIDEGIVGYRDDSLATVKRNQIQYEMPLEIISYKDLYNWSMDEIVSCAGIRSSCT 148          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_XENLA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis GN=ctu1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.262e-51
Identity = 94/137 (68.61%), Postives = 112/137 (81.75%), Query Frame = 2
Query:  239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            CS+C + +A L+RPKT   +C++CF+  FEEEIH  IV  +LF  GE++ IGASGGKDSTVLA V+  LN R+ YGLDL LLS+DEGISGYRDDSLQTVKRN+ QY LPLKIVSY +LYGWTMD+IVK +GLKNNCT
Sbjct:    5 CSSCEEWRAVLRRPKTGHSLCKDCFFYAFEEEIHNTIVSAKLFHPGEKVGIGASGGKDSTVLAHVMKVLNERYAYGLDLILLSVDEGISGYRDDSLQTVKRNQQQYELPLKIVSYLELYGWTMDQIVKQVGLKNNCT 141          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_CANGA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida glabrata GN=NCS6 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.260e-51
Identity = 94/139 (67.63%), Postives = 114/139 (82.01%), Query Frame = 2
Query:  233 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            +LC  C+ RKA L+RPK L++IC+ECFY VFE EIH  IV N LF+ GE++AIGASGGKDSTVLA +L  LN RH+YG+ L LLSIDEGI GYRDDSL TVKRN+ QY LPL+IVS++DLY WTMDEIV + G++N+CT
Sbjct:   20 QLCELCHGRKAVLRRPKNLQKICKECFYYVFETEIHNTIVSNNLFQRGEKVAIGASGGKDSTVLAHILKLLNDRHDYGVKLVLLSIDEGIVGYRDDSLATVKRNQKQYQLPLEIVSFRDLYDWTMDEIVAIAGIRNSCT 158          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_DANRE (Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio GN=ctu1 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.563e-51
Identity = 94/137 (68.61%), Postives = 111/137 (81.02%), Query Frame = 2
Query:  239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            CS C Q++A LKRPKT   +C++CF+  FEEEIHQ I    LF  GE +AIGASGGKDSTVLA V+  LN R++YGL L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LYGWTMD IVK +GLKNNCT
Sbjct:    5 CSNCEQKRAVLKRPKTGHSLCKDCFFWAFEEEIHQTITSAGLFNRGETVAIGASGGKDSTVLAHVMKLLNERYDYGLKLLLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYEELYGWTMDAIVKQVGLKNNCT 141          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_YARLI (Cytoplasmic tRNA 2-thiolation protein 1 OS=Yarrowia lipolytica GN=NCS6 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.761e-50
Identity = 94/138 (68.12%), Postives = 110/138 (79.71%), Query Frame = 2
Query:  236 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            LC  C  RKA LKRPKTL+ IC+ CFY VFE EIH  IV + LF  GER+AIGASGGKDSTVLA V+  LN R+NYG+D  LLSIDEGI GYRDDSL+TVKRN++QY + L++VSY +LYGW+MD+IV  IG KNNCT
Sbjct:    2 LCVLCECRKAMLKRPKTLQPICKPCFYNVFETEIHNTIVESNLFFPGERVAIGASGGKDSTVLAHVMKTLNERYNYGVDFVLLSIDEGIHGYRDDSLETVKRNKVQYDMDLEVVSYSELYGWSMDQIVAQIGNKNNCT 139          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_VANPO (Cytoplasmic tRNA 2-thiolation protein 1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.761e-50
Identity = 90/139 (64.75%), Postives = 114/139 (82.01%), Query Frame = 2
Query:  233 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            +LC  C+ RKA ++RPK L++IC+ CF+ VFE EIH+ IV N LF  GER+A+GASGGKDSTVLA+VL  LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN+ QY LPL+I SY+DLY WTMD+IV+  G++N+CT
Sbjct:   19 QLCELCHSRKAIIRRPKNLQKICKLCFFHVFETEIHETIVSNDLFYRGERVAVGASGGKDSTVLAYVLKLLNERHDYGIEIVLLSIDEGIVGYRDDSLATVKRNQQQYQLPLEIFSYQDLYDWTMDDIVETAGIRNSCT 157          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_PICST (Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia stipitis GN=NCS6 PE=3 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 6.151e-50
Identity = 92/151 (60.93%), Postives = 119/151 (78.81%), Query Frame = 2
Query:  197 EVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            E++  K K +   LC  C+ RKA +KRPK L+++C++CFY+VFE EIH  IV  +LF  G+++AIGASGGKDSTVLA VL  LN R++YGL L LLSIDEGI GYRDDSL TVKRN++QY +PL+I+SY+DLY WTMDEIV   G++++CT
Sbjct:    3 EISAKKVKVSA--LCELCHARKAVMKRPKNLQKLCKDCFYKVFETEIHNTIVDAKLFSPGDKVAIGASGGKDSTVLASVLKTLNERYDYGLILVLLSIDEGIKGYRDDSLATVKRNQVQYEMPLEIISYRDLYNWTMDEIVSCAGIRSSCT 151          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_CANAL (Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida albicans GN=NCS6 PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.151e-50
Identity = 91/138 (65.94%), Postives = 111/138 (80.43%), Query Frame = 2
Query:  236 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            LC  C+ RKA +KRPK L ++C+ECFY +FE EIH  I+ N LF  GE+IAIGASGGKDSTVLA +L  LN R++YGL+L LLSIDEGI GYRDDSL TVKRN+ QY +PL+IVSYKDLY W+MDEIV   G++++CT
Sbjct:   21 LCELCHGRKAVMKRPKNLMKLCKECFYNIFETEIHNTIISNDLFYRGEKIAIGASGGKDSTVLASILKTLNERYDYGLNLVLLSIDEGIKGYRDDSLATVKRNQKQYDMPLEIVSYKDLYNWSMDEIVACAGIRSSCT 158          
The following BLAST results are available for this feature:
BLAST of DR404094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CTU1_MALGO1.121e-5166.19Cytoplasmic tRNA 2-thiolation protein 1 OS=Malasse... [more]
CTU1_LACBS1.912e-5168.61Cytoplasmic tRNA 2-thiolation protein 1 OS=Laccari... [more]
CTU1_PICGU2.497e-5164.86Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia ... [more]
CTU1_XENLA3.262e-5168.61Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus... [more]
CTU1_CANGA4.260e-5167.63Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida... [more]
CTU1_DANRE5.563e-5168.61Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio r... [more]
CTU1_YARLI2.761e-5068.12Cytoplasmic tRNA 2-thiolation protein 1 OS=Yarrowi... [more]
CTU1_VANPO2.761e-5064.75Cytoplasmic tRNA 2-thiolation protein 1 OS=Vanderw... [more]
CTU1_PICST6.151e-5060.93Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia ... [more]
CTU1_CANAL6.151e-5065.94Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404094 ID=DR404094; Name=DR404094; organism=Citrus sinensis; type=EST; length=650bp
GGGGCAGAGACTTTGGAGGGGTGAGGGTGCCGGTCAGACCGCTGCTTTCA
TAACAGTTCCATTCCGAGAAGCTGTTGCCGCACTGCAAAAGCAAACTCAA
ATCTTCAATTTTTCCCTCATAACCCAAACTTGATCTCTTGTAAGTCTGTT
AGCTTGTCTCTTCATAGTTTACTTAGTGGGCCATTAACCGTCAATGGAGG
TCGCCGAGTCGAAGTCCAAGAAGGCCGGTGGCCGCCTTTGTTCCACCTGT
AACCAGAGAAAGGCTGCCCTCAAACGACCTAAAACCCTAGAACAGATATG
TAGGGAGTGTTTCTATGAGGTATTTGAGGAGGAGATCCACCAAGTCATTG
TGGGCAATCAGCTATTCAAGGCTGGTGAGCGTATTGCCATCGGCGCCTCT
GGTGGAAAAGATTCCACTGTCCTTGCTTTTGTGTTGTCAGAGCTGAACCG
GCGTCACAACTATGGCCTTGATCTTTTCCTCCTATCAATTGATGAAGGCA
TTTCAGGATACAGGGATGATTCACTTCAAACTGTCAAAAGAAATGAAATT
CAGTATGGTCTGCCACTGAAGATTGTTTCATACAAGGATTTATATGGATG
GACAATGGATGAGATAGTGAAGGTGATCGGTTTAAAGAATAATTGCACCT
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