DR404094

Overview
NameDR404094
Unique NameDR404094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_YEAST (Cytoplasmic tRNA 2-thiolation protein 1 OS=Saccharomyces cerevisiae GN=NCS6 PE=1 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 3.987e-49
Identity = 89/139 (64.03%), Postives = 113/139 (81.29%), Query Frame = 2
Query:  233 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            +LC  C+ RKA ++RPK L ++C++CF  VFE EIH  IV N LF+ GE++A+GASGGKDSTVLA +L  LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDLY WTMDEIV V G++N+CT
Sbjct:   20 QLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKDSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVSVAGIRNSCT 158          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_YEAS7 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.987e-49
Identity = 89/139 (64.03%), Postives = 113/139 (81.29%), Query Frame = 2
Query:  233 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            +LC  C+ RKA ++RPK L ++C++CF  VFE EIH  IV N LF+ GE++A+GASGGKDSTVLA +L  LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDLY WTMDEIV V G++N+CT
Sbjct:   20 QLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKDSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVSVAGIRNSCT 158          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_YEAS1 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.987e-49
Identity = 89/139 (64.03%), Postives = 113/139 (81.29%), Query Frame = 2
Query:  233 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            +LC  C+ RKA ++RPK L ++C++CF  VFE EIH  IV N LF+ GE++A+GASGGKDSTVLA +L  LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDLY WTMDEIV V G++N+CT
Sbjct:   20 QLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKDSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVSVAGIRNSCT 158          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_DEBHA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Debaryomyces hansenii GN=NCS6 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.987e-49
Identity = 93/154 (60.39%), Postives = 116/154 (75.32%), Query Frame = 2
Query:  188 PSMEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            P  +VA  K K +   LC  CN RKA +KRPK L+++C+ECFY VFE EIH  I    LF+ G+++AIGASGGKDSTVLA VL  LN R++Y L+L LLSIDEGI GYRDDSL TVKRN+ QY + L+I+SYKDLY W+MDEIV   G++++CT
Sbjct:    2 PEEKVATKKIKLSA--LCELCNGRKAVMKRPKNLQKLCKECFYNVFETEIHNTIADANLFQPGDKVAIGASGGKDSTVLASVLKTLNERYDYRLELVLLSIDEGIKGYRDDSLATVKRNQAQYNMALEIISYKDLYNWSMDEIVSCAGIRSSCT 153          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_ASPNC (Cytoplasmic tRNA 2-thiolation protein 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ncs6 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.283e-47
Identity = 88/137 (64.23%), Postives = 105/137 (76.64%), Query Frame = 2
Query:  239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            C+ C+ ++A + RPK  +++CR CF  VFE E+H+ I    LF  GER+AIGASGGKDSTVLA VL  LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN  QY +PL IVSY DLYGWTMD++V  +G K NCT
Sbjct:    6 CARCHDQRAVIIRPKNRQKLCRTCFLHVFETEVHETITSTSLFHPGERVAIGASGGKDSTVLAAVLKTLNERYNYGLDLCLLSIDEGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYGWTMDQVVAQVGKKGNCT 142          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_DROGR (Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila grimshawi GN=GH20281 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.852e-46
Identity = 87/137 (63.50%), Postives = 107/137 (78.10%), Query Frame = 2
Query:  239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            C      KAALKRPKT + +C++CF+  FE EIH  IV ++LF+ GE++A+ ASGGKDSTVLA V+  LN RH+YGLDL LLSIDEGI+GYRDDSL+TVK+N   Y +PLKI+SY++LYGWTMD IV  IG  NNCT
Sbjct:    5 CKAKCGNKAALKRPKTGDALCKDCFFAAFEAEIHHTIVSSRLFRRGEKVAVAASGGKDSTVLAHVMKLLNERHDYGLDLVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCT 141          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_DROSE (Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila sechellia GN=GM20632 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.419e-46
Identity = 87/138 (63.04%), Postives = 107/138 (77.54%), Query Frame = 2
Query:  236 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            +C +    +AALKRPKT + +C+ECF+  FE EIH  I  + LF+ GE++A+ ASGGKDSTVLA VL  LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N   Y +PLKI+SY++LYGWTMD IV  IG  NNCT
Sbjct:    4 ICKSKCGNRAALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCT 141          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_DROME (Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila melanogaster GN=CG8078 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.419e-46
Identity = 87/138 (63.04%), Postives = 107/138 (77.54%), Query Frame = 2
Query:  236 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            +C +    +AALKRPKT + +C+ECF+  FE EIH  I  + LF+ GE++A+ ASGGKDSTVLA VL  LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N   Y +PLKI+SY++LYGWTMD IV  IG  NNCT
Sbjct:    4 ICKSQCGNRAALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCT 141          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_AEDAE (Cytoplasmic tRNA 2-thiolation protein 1 OS=Aedes aegypti GN=AAEL011283 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.419e-46
Identity = 91/138 (65.94%), Postives = 107/138 (77.54%), Query Frame = 2
Query:  236 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            LC+T   RKA LKRPKT + +CRECF+  FE EIH  I  N+LF+ G+ +AI ASGGKDSTVLA VL  LN R++YGL L LLSIDEGI+GYRDDSL+TVKRN   YG+ LKI+SY +LYGWTMD+IV  IG  NNCT
Sbjct:    4 LCTTGCSRKAFLKRPKTGDTLCRECFFLAFETEIHNTIEQNKLFRRGDVVAIAASGGKDSTVLAHVLKVLNERYDYGLKLVLLSIDEGITGYRDDSLETVKRNRDDYGMELKILSYDELYGWTMDKIVSKIGRSNNCT 141          
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_DROER (Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila erecta GN=GG10584 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.159e-46
Identity = 89/136 (65.44%), Postives = 106/136 (77.94%), Query Frame = 2
Query:  242 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649
            S C  R AALKRPKT + +C+ECF+  FE EIH  I  + LF+ GE++A+ ASGGKDSTVLA VL  LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N   Y +PLKI+SY++LYGWTMD IV  IG  NNCT
Sbjct:    7 SQCGNR-AALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCT 141          
The following BLAST results are available for this feature:
BLAST of DR404094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CTU1_YEAST3.987e-4964.03Cytoplasmic tRNA 2-thiolation protein 1 OS=Sacchar... [more]
CTU1_YEAS73.987e-4964.03Cytoplasmic tRNA 2-thiolation protein 1 OS=Sacchar... [more]
CTU1_YEAS13.987e-4964.03Cytoplasmic tRNA 2-thiolation protein 1 OS=Sacchar... [more]
CTU1_DEBHA3.987e-4960.39Cytoplasmic tRNA 2-thiolation protein 1 OS=Debaryo... [more]
CTU1_ASPNC1.283e-4764.23Cytoplasmic tRNA 2-thiolation protein 1 OS=Aspergi... [more]
CTU1_DROGR1.852e-4663.50Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosoph... [more]
CTU1_DROSE2.419e-4663.04Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosoph... [more]
CTU1_DROME2.419e-4663.04Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosoph... [more]
CTU1_AEDAE2.419e-4665.94Cytoplasmic tRNA 2-thiolation protein 1 OS=Aedes a... [more]
CTU1_DROER3.159e-4665.44Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404094 ID=DR404094; Name=DR404094; organism=Citrus sinensis; type=EST; length=650bp
GGGGCAGAGACTTTGGAGGGGTGAGGGTGCCGGTCAGACCGCTGCTTTCA
TAACAGTTCCATTCCGAGAAGCTGTTGCCGCACTGCAAAAGCAAACTCAA
ATCTTCAATTTTTCCCTCATAACCCAAACTTGATCTCTTGTAAGTCTGTT
AGCTTGTCTCTTCATAGTTTACTTAGTGGGCCATTAACCGTCAATGGAGG
TCGCCGAGTCGAAGTCCAAGAAGGCCGGTGGCCGCCTTTGTTCCACCTGT
AACCAGAGAAAGGCTGCCCTCAAACGACCTAAAACCCTAGAACAGATATG
TAGGGAGTGTTTCTATGAGGTATTTGAGGAGGAGATCCACCAAGTCATTG
TGGGCAATCAGCTATTCAAGGCTGGTGAGCGTATTGCCATCGGCGCCTCT
GGTGGAAAAGATTCCACTGTCCTTGCTTTTGTGTTGTCAGAGCTGAACCG
GCGTCACAACTATGGCCTTGATCTTTTCCTCCTATCAATTGATGAAGGCA
TTTCAGGATACAGGGATGATTCACTTCAAACTGTCAAAAGAAATGAAATT
CAGTATGGTCTGCCACTGAAGATTGTTTCATACAAGGATTTATATGGATG
GACAATGGATGAGATAGTGAAGGTGATCGGTTTAAAGAATAATTGCACCT
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