DR404094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_LODEL (Cytoplasmic tRNA 2-thiolation protein 1 OS=Lodderomyces elongisporus GN=NCS6 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.327e-44 Identity = 89/159 (55.97%), Postives = 112/159 (70.44%), Query Frame = 2 Query: 200 VAESKSKKAG-GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER--------IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649 V S +KK LC C+ RKA +KRPK L ++C+ECF+ VFE E+H IV N+LF E +AIGASGGKDSTVLA V+ LN R+NYGL L LL IDEGI GYRD SL+TVK N+ +Y +PL+I+SYKDLY WTMDE+V G++++CT Sbjct: 2 VESSNTKKVKVSSLCELCHGRKAVMKRPKNLRKLCKECFFHVFETEVHNTIVENKLFANVENSEFPERRAVAIGASGGKDSTVLASVMKTLNERYNYGLKLVLLCIDEGIKGYRDHSLETVKMNQKEYDMPLEILSYKDLYDWTMDEVVSCAGIRSSCT 160
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_BOVIN (Cytoplasmic tRNA 2-thiolation protein 1 OS=Bos taurus GN=CTU1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.618e-28 Identity = 60/129 (46.51%), Postives = 88/129 (68.22%), Query Frame = 2 Query: 239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVK 622 C++C++ +AAL+RP++ + +C CF FE E+ +V +L G +A+GASGGKDSTVLA VL EL R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y DL+ GWTMD + + Sbjct: 6 CASCHKARAALRRPRSGQALCGSCFCAAFEAEVLHTVVAGRLLPPGAVVAVGASGGKDSTVLAHVLRELAPR--LGISLHLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYADLFGGWTMDAVAR 132
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_RAT (Cytoplasmic tRNA 2-thiolation protein 1 OS=Rattus norvegicus GN=Ctu1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.602e-27 Identity = 59/129 (45.74%), Postives = 88/129 (68.22%), Query Frame = 2 Query: 239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVK 622 C +C++ +AAL+RP++ + +C CF FE E+ + ++ L G +A+GASGGKDSTVLA VL EL R G+ L L+++DEGI GYRD +L+ V+ ++ LPL IV+Y+DL+ GWTMD + + Sbjct: 6 CFSCHKARAALRRPRSGQALCGPCFCAAFEAEVLRTVLAGHLLPQGAVVAVGASGGKDSTVLAHVLRELAPR--LGITLHLVAVDEGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFGGWTMDAVAR 132
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_MOUSE (Cytoplasmic tRNA 2-thiolation protein 1 OS=Mus musculus GN=Ctu1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.602e-27 Identity = 59/129 (45.74%), Postives = 87/129 (67.44%), Query Frame = 2 Query: 239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVK 622 C +C++ +AAL+RP++ + +C CF FE E+ ++ L G +A+GASGGKDSTVLA VL EL R G+ L L+++DEGI GYRD +L+ V+ ++ LPL IV+Y+DL+ GWTMD + + Sbjct: 6 CFSCHKTRAALRRPRSGQALCGSCFCAAFEAEVLHTVLAGHLLPPGAVVAVGASGGKDSTVLAHVLRELAPR--LGITLHLVAVDEGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFGGWTMDAVAR 132
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_HUMAN (Cytoplasmic tRNA 2-thiolation protein 1 OS=Homo sapiens GN=CTU1 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.743e-26 Identity = 58/129 (44.96%), Postives = 86/129 (66.67%), Query Frame = 2 Query: 239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVK 622 C++C+ +AAL+RP + + +C CF FE E+ ++ +L G +A+GASGGKDSTVLA VL L R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y+DL+ GWTMD + + Sbjct: 6 CASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDSTVLAHVLRALAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVAR 132
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: Y1157_METJA (CTU1/ATPBD3 family protein MJ1157 OS=Methanocaldococcus jannaschii GN=MJ1157 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.691e-15 Identity = 49/129 (37.98%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 236 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVK 622 LCS N+ A + + +C+ECF + E +V+ G + + +I IG SGGKDS V+A++L EL + H L +DEGI G+R+ + + VK +Y L LKI+ ++D G+T+DEIVK Sbjct: 39 LCSCGNE--AFYYQKYSNRHLCKECFKKDIERRAKKVL-GKDIIRNNVKIGIGISGGKDSLVMAYILKELFK-HIPNAKLICFFVDEGIKGFRNIAEKYVKEFCKEYNLDLKIIKFEDEIGYTLDEIVK 163
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: Y1478_METJA (CTU1/ATPBD3 family protein MJ1478 OS=Methanocaldococcus jannaschii GN=MJ1478 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12 Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 239 CSTCNQRK-AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEI 616 C C+++ LK PK +C+E F E FE ++ + I ++ E+I + SGGKD A+VL +L Y ++LF +++ GI G+ ++SL+ VK + +PL +V+ KD+ G TM++I Sbjct: 7 CKFCDKKSYIKLKSPKMY--LCKEHFVEYFENKVKKSIDKYKMLSKDEKILVAVSGGKDGHAAAWVLKKL----GYNIELFHINL--GIEGFSEESLKAVKELAEKLEVPLHVVNLKDITGKTMEDI 125
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: ABP3L_HUMAN (Putative ATP-binding domain-containing protein 3-like protein OS=Homo sapiens PE=5 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.351e-11 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGI 502 C++C+ A+L+RP + + +C CF FE E+ +++ L G +A+G SGGKDSTVLA VL L G+ L L+++D+GI Sbjct: 6 CASCHVACASLRRPCSGQVLCGSCFCTAFEAEVQHMVLVGYLLPPGAVVALGTSGGKDSTVLAHVLRTL--APGLGILLQLMAVDKGI 91 The following BLAST results are available for this feature:
BLAST of DR404094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404094 ID=DR404094; Name=DR404094; organism=Citrus sinensis; type=EST; length=650bpback to top |