CX069879
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_METMJ (30S ribosomal protein S10P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps10p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.031e-15 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 468 + K RI LS + + +E VC + A+ + + GP+ +PTK L + TRKSP GEGT TWDR+++RVHKR+ID+ + ++Q+ I + + +E+ + Sbjct: 1 MQKARIRLSGTDFEKIEMVCDRIKEIAERTGVNLAGPIPLPTKKLVVPTRKSPDGEGTATWDRWQMRVHKRLIDIDADERALRQLMRIQVPKDIGIEIVL 100
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_HALMA (30S ribosomal protein S10P OS=Haloarcula marismortui GN=rps10p PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 2.031e-15 Identity = 36/98 (36.73%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 181 RITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 474 R+ L+ + ++L+ +C D+ A + + GPV +PTK L + +RKSP GEGT TW+ +E+RVHKR+ID+ + ++Q+ I + V +E+ + D Sbjct: 6 RVRLAGTSPEDLDDICADVREIANKTGVELSGPVPLPTKTLEVPSRKSPDGEGTATWEHWEMRVHKRLIDIDADERALRQLMRIQVPNDVSIEIVLED 103
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_METJA (30S ribosomal protein S10P OS=Methanocaldococcus jannaschii GN=rps10p PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15 Identity = 37/98 (37.76%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEV 462 + + RI LSS + K L+++C + A+ + + GP+ +PTKVL + TRKSP GEG++T+DR+ +++HKR+ID+ + ++ I I I V++E+ Sbjct: 1 MQRARIKLSSTDHKVLDEICRQIKEIAEKTGVDISGPIPLPTKVLRVVTRKSPDGEGSSTFDRWTMKIHKRLIDIDADERALRHIMKIRIPDNVQIEI 98
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_HALWD (30S ribosomal protein S10P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps10p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15 Identity = 37/102 (36.27%), Postives = 63/102 (61.76%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 474 + + R+ L+ + +L+ +C D+ A + + GP+ +PTK L I TRKSP GEGT TW+ +E+RVHKR+ID+ + ++Q+ I + V +E+ + D Sbjct: 1 MQQARVRLAGTSPDDLDDICDDVRDIADTTGVNLSGPIPLPTKTLEIPTRKSPDGEGTATWEHWEMRVHKRLIDIDADERALRQLMRIQVPNDVSIEIVLED 102
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_HALLT (30S ribosomal protein S10P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rps10p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15 Identity = 35/102 (34.31%), Postives = 64/102 (62.75%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 474 + + R+ L+ + ++L+ +C D+ A + + GP+ +PTK L I +RKSP GEGT TW+ +E+RVHKR+ID+ + ++Q+ + + V +E+ + D Sbjct: 1 MQQARVRLAGTSPEDLDDICADVREIADSTGVALSGPIPLPTKTLEIPSRKSPDGEGTATWEHWEMRVHKRLIDIDADERALRQLMRVQVPNDVSIEIVLED 102
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_NITMS (30S ribosomal protein S10P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps10p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 33/96 (34.38%), Postives = 65/96 (67.71%), Query Frame = 1 Query: 181 RITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 468 R+ L+S ++ L+ VC +++ K ++VKGP +P K LH+ TRKSPCG GT T++++E+++H+R+I++ + ++Q+ + I V +E+++ Sbjct: 6 RVKLTSTSLPKLDGVCGEIMGIGKKTGVKVKGPTPLPVKRLHVATRKSPCGNGTETYEKWEMKMHRRIININADDKAIRQLMRLKIPDDVYIELSL 101
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_METLZ (30S ribosomal protein S10P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps10p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 468 + K RI L+ + + +E VCT + A+ + + GP+ +PTK L + RKSP GEGT TWDR+++RVHKR+IDL + ++Q+ I + + +E+ + Sbjct: 1 MQKARIRLTGTDYEKVETVCTRIREIAERTGVNMAGPIPLPTKRLIVPIRKSPDGEGTATWDRWQMRVHKRLIDLDADERALRQLMRIQVPKDISIEIVL 100
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_META3 (30S ribosomal protein S10P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps10p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 40/100 (40.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 468 + K RI LSS + + L+ VC ++ A+ + + GP+ +PTK L +TTRKS GEG++++DR+ +RVHKRVID+ + +K I I I V++E+ + Sbjct: 1 MQKARIKLSSTSYQELDGVCNNIKTIAEKTGVDMAGPIPLPTKTLKVTTRKSTDGEGSSSFDRWTMRVHKRVIDIEADERTMKHIMKIRIPEAVQIEIEL 100
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_HALSA (30S ribosomal protein S10P OS=Halobacterium salinarium GN=rps10p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 36/102 (35.29%), Postives = 64/102 (62.75%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 474 + + R+ L+ + +L+ +C ++ A ++V GPV +PTK L + +RKSP GEGT TW+ +E+RVHKR+ID+ + ++Q+ I + V +E+ + D Sbjct: 1 MQQARVRLAGVDPDDLDNICGEVQEIADKTGVKVSGPVPLPTKTLEVPSRKSPDGEGTATWEHWEMRVHKRLIDIDADERALRQLMRIQVPNDVNIEIVLED 102
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_HALS3 (30S ribosomal protein S10P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps10p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 36/102 (35.29%), Postives = 64/102 (62.75%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 474 + + R+ L+ + +L+ +C ++ A ++V GPV +PTK L + +RKSP GEGT TW+ +E+RVHKR+ID+ + ++Q+ I + V +E+ + D Sbjct: 1 MQQARVRLAGVDPDDLDNICGEVQEIADKTGVKVSGPVPLPTKTLEVPSRKSPDGEGTATWEHWEMRVHKRLIDIDADERALRQLMRIQVPNDVNIEIVLED 102 The following BLAST results are available for this feature:
BLAST of CX069879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069879 ID=CX069879; Name=CX069879; organism=Citrus sinensis; type=EST; length=720bpback to top |