CX069878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069878 vs. ExPASy Swiss-Prot
Match: RS10_PYRWO (30S ribosomal protein S10P OS=Pyrococcus woesei GN=rps10p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.988e-17 Identity = 42/100 (42.00%), Postives = 69/100 (69.00%), Query Frame = -1 Query: 264 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 563 + K RI ++S NV++L++V + + A+ +R+ GP+ +PTK + ITTRKSP GEG+ T+DR+ELRVHKR+ID+ + ++QI I + V +E+ + Sbjct: 1 MQKARIKIASTNVRSLDEVANQIKQIAERTGVRMSGPIPLPTKRIRITTRKSPDGEGSATFDRWELRVHKRLIDIEADERAMRQIMRIRVPEDVTIEIEL 100
BLAST of CX069878 vs. ExPASy Swiss-Prot
Match: RS10_PYRFU (30S ribosomal protein S10P OS=Pyrococcus furiosus GN=rps10p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.988e-17 Identity = 42/100 (42.00%), Postives = 69/100 (69.00%), Query Frame = -1 Query: 264 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 563 + K RI ++S NV++L++V + + A+ +R+ GP+ +PTK + ITTRKSP GEG+ T+DR+ELRVHKR+ID+ + ++QI I + V +E+ + Sbjct: 1 MQKARIKIASTNVRSLDEVANQIKQIAERTGVRMSGPIPLPTKRIRITTRKSPDGEGSATFDRWELRVHKRLIDIEADERAMRQIMRIRVPEDVTIEIEL 100
BLAST of CX069878 vs. ExPASy Swiss-Prot
Match: RS10_THEAC (30S ribosomal protein S10P OS=Thermoplasma acidophilum GN=rps10p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17 Identity = 40/99 (40.40%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 264 HKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 560 +K RI+LS + +++VC ++ A + + GP+ +PTK L + RKSP GEGTNTWD +E+R+HKR+ID+ + ++Q+ I I GV++E+ I Sbjct: 4 YKARISLSGTEHRVVDRVCNEIKEIASRTGVEIHGPMPLPTKRLVVPVRKSPDGEGTNTWDHWEMRIHKRLIDVDADERTLRQLMRIPIPDGVQIEIQI 102
BLAST of CX069878 vs. ExPASy Swiss-Prot
Match: RS10_PYRAB (30S ribosomal protein S10P OS=Pyrococcus abyssi GN=rps10p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17 Identity = 42/100 (42.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 264 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 563 + K RI L+S NV++LE+V + + A+ +R+ GP+ +PTK + I TRKSP GEG+ T+DR+ELR+HKR+ID+ + ++QI I + V +E+ + Sbjct: 1 MQKARIKLASTNVRSLEEVANQIKQIAERTGVRMSGPIPLPTKRIRIVTRKSPDGEGSATFDRWELRIHKRLIDIEADERAMRQIMRIRVPEDVTIEIEL 100
BLAST of CX069878 vs. ExPASy Swiss-Prot
Match: RS10_PICTO (30S ribosomal protein S10P OS=Picrophilus torridus GN=rps10p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17 Identity = 42/100 (42.00%), Postives = 66/100 (66.00%), Query Frame = -1 Query: 264 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 563 ++K RI+LS K ++ VC ++ AK + + GP+ +PTK L + RKSP GEG+ TWDR+E+RVHKR+ID+ + ++Q+ I+I GV +E+ I Sbjct: 2 VYKARISLSGTENKIVDVVCEEIKGIAKRTGVEIHGPIPLPTKRLVVPVRKSPDGEGSPTWDRWEMRVHKRLIDVDADERTLRQLMRISIPDGVRIEIQI 101
BLAST of CX069878 vs. ExPASy Swiss-Prot
Match: RS10_PYRHO (30S ribosomal protein S10P OS=Pyrococcus horikoshii GN=rps10p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.509e-17 Identity = 42/100 (42.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 264 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 563 + K RI L+S NV++LE+V + + A+ +R+ GP+ +PTK + I TRKSP GEG+ T+DR+ELR+HKR+ID+ + ++QI I + V +E+ + Sbjct: 1 MQKARIKLASTNVRSLEEVANQIRQIAERTGVRMSGPIPLPTKRIRIVTRKSPDGEGSATFDRWELRIHKRLIDIEADERAMRQIMRIRVPEDVTIEIEL 100
BLAST of CX069878 vs. ExPASy Swiss-Prot
Match: RS10_METMA (30S ribosomal protein S10P OS=Methanosarcina mazei GN=rps10p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.515e-16 Identity = 39/100 (39.00%), Postives = 63/100 (63.00%), Query Frame = -1 Query: 264 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 563 + K RI LS + K+L+ VC + A+ + + GPV +PTK L + TRKSP G+GT TWD +E+RVHKR+ID+ + ++Q+ I + + +E+ + Sbjct: 1 MQKARIRLSGISPKDLDGVCNQVKSIAERTGVNISGPVPLPTKKLVVPTRKSPSGDGTATWDHWEMRVHKRLIDIAADERALRQLMRIQVPKDINIEIVL 100
BLAST of CX069878 vs. ExPASy Swiss-Prot
Match: RS10_METBF (30S ribosomal protein S10P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps10p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.515e-16 Identity = 39/100 (39.00%), Postives = 63/100 (63.00%), Query Frame = -1 Query: 264 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 563 + K RI LS + K+L+ VC + A+ + + GPV +PTK L + TRKSP G+GT TWD +E+RVHKR+ID+ + ++Q+ I + + +E+ + Sbjct: 1 MQKARIRLSGISPKDLDGVCNQVKSIAERTGVNISGPVPLPTKKLVVPTRKSPSGDGTATWDHWEMRVHKRLIDIAADERALRQLMRIQVPKDINIEIVL 100
BLAST of CX069878 vs. ExPASy Swiss-Prot
Match: RS10_METAC (30S ribosomal protein S10P OS=Methanosarcina acetivorans GN=rps10p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.515e-16 Identity = 39/100 (39.00%), Postives = 63/100 (63.00%), Query Frame = -1 Query: 264 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 563 + K RI LS + K+L+ VC + A+ + + GPV +PTK L + TRKSP G+GT TWD +E+RVHKR+ID+ + ++Q+ I + + +E+ + Sbjct: 1 MQKARIRLSGISPKDLDGVCNQVKSIAERTGVNISGPVPLPTKKLVVPTRKSPSGDGTATWDHWEMRVHKRLIDIAADERALRQLMRIQVPKDINIEIVL 100
BLAST of CX069878 vs. ExPASy Swiss-Prot
Match: RS10_CENSY (30S ribosomal protein S10P OS=Cenarchaeum symbiosum GN=rps10p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15 Identity = 36/94 (38.30%), Postives = 62/94 (65.96%), Query Frame = -1 Query: 270 RITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEV 551 R+ L+S N+ L+ VC ++ K +R+KGP +P K LHI TRKSPCG GT T++++E+R+H+R+ID+ + ++++ + I V +E+ Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKWEMRMHRRIIDISADDKTIRRLIDLKIPDDVHLEL 99 The following BLAST results are available for this feature:
BLAST of CX069878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069878 ID=CX069878; Name=CX069878; organism=Citrus sinensis; type=EST; length=734bpback to top |