DR404090

Overview
NameDR404090
Unique NameDR404090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 3.922e-31
Identity = 72/139 (51.80%), Postives = 89/139 (64.03%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEY 505
            VK+GINGFGRIGR+V R  ++  DVE+VAVNDPFI   Y  +M KYDS HG +K   ++V     ++ G K V  +  R+P  IPW +TGAEY+VESTGVFT               VIISAPS  APM+V+GVNE  Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIEPKYAEYMLKYDSTHGVFK-GTIQVSGSDLIVNG-KTVKFYTERDPSAIPWKDTGAEYIVESTGVFTTTEKASAHLKGGAKRVIISAPSADAPMYVMGVNEKTY 139          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P2_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schizosaccharomyces pombe GN=gpd3 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 3.922e-31
Identity = 70/140 (50.00%), Postives = 91/140 (65.00%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEYKP 511
            K+GINGFGRIGR+V R  +    +++VAVNDPFI  DYM +MFKYDS HG+++   ++ K  K ++ G   + V   R+P  I W+ +GAEYV+ESTGVFT               VIISAPSK APMFVVGVN  ++ P
Sbjct:    5 KVGINGFGRIGRIVLRNAILTGKIQVVAVNDPFIDLDYMAYMFKYDSTHGRFE-GSVETKGGKLVIDGHS-IDVHNERDPANIKWSASGAEYVIESTGVFTTKETASAHLKGGAKRVIISAPSKDAPMFVVGVNLEKFNP 142          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 5.123e-31
Identity = 64/142 (45.07%), Postives = 91/142 (64.08%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEYKPE 514
            V + +NGFGRIGRLV R+ + R D+ LVA+NDPFI+TDY  +MFKYDS HG++   E+    D  +L G+K V VF  ++P  +PW + G +  ++STG+F                V+I+APS +APM+V+GVNE  Y P+
Sbjct:    2 VNVSVNGFGRIGRLVTRIAISRKDINLVAINDPFISTDYAAYMFKYDSTHGRF-DGEVSHDKDHIILNGKK-VAVFNEKDPAALPWGKLGVDVAIDSTGIFKEMDSANKHIEAGAKKVVITAPSGSAPMYVMGVNEETYTPD 141          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P_USTMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ustilago maydis GN=GAPD PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 5.123e-31
Identity = 69/145 (47.59%), Postives = 91/145 (62.76%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEYKPE 514
            M +V IGINGFGRIGR+V R  +  +   +VA+NDPFI  +YM +M KYDS HG + + ++  KD K ++ G K + VF  ++P  IPW + GA YVVESTGVFT               V+ISAPS  APM+V GVN + Y P+
Sbjct:    1 MSQVNIGINGFGRIGRIVFRNSVVHNTANVVAINDPFIDLEYMVYMLKYDSTHGVF-NGDISTKDGKLIVNG-KSIAVFAEKDPSNIPWGQAGAHYVVESTGVFTTIDKASAHIKGGAKKVVISAPSADAPMYVCGVNLDAYDPK 143          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 5.123e-31
Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEYKPEL 517
            K+GINGFGRIGR+V R  +   +V++VAVNDPFI T Y  +M KYDS HGQ+K   ++  ++  ++ G+K +  F  R+P  IPW  TGA+Y+VESTGVFT               V+ISAPS  APMFV+GVN   Y  ++
Sbjct:    4 KVGINGFGRIGRIVFRNAINHGEVDVVAVNDPFIETHYAAYMLKYDSTHGQFK-GTIETYEEGLIVNGKK-IRFFAERDPAAIPWGTTGADYIVESTGVFTTQEKAAAHLKGGAKKVVISAPSADAPMFVMGVNNTSYTKDI 143          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P1_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Candida glabrata GN=GPD1 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.691e-31
Identity = 61/143 (42.66%), Postives = 91/143 (63.64%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEYKPEL 517
            V++ INGFGRIGR+V R+ ++RD +++VA+NDPFIT DY  +MFKYDS HG++        DDK L+   K +  +  R+P ++PW +   + V+E+TGVFT               V+I+ PS  APMFV GVN+++Y  ++
Sbjct:    2 VRVAINGFGRIGRIVLRIAMKRDGIDVVAINDPFITNDYAAYMFKYDSTHGRYDGE--VTHDDKDLIIDGKAIKCYQERDPADLPWGDNDIDIVIEATGVFTAKDLAEKHITAGAKKVVITGPSATAPMFVKGVNDDKYTSDV 142          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P_TRIAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Trichoderma atroviride GN=gpd1 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 8.738e-31
Identity = 68/139 (48.92%), Postives = 91/139 (65.47%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEY 505
            +K+GINGFGRIGR++    L++ ++ +VAVNDPFI   Y  +M KYDS HG +K  +++V D + L+   KP+  +  R+P  I W+ETGAEY+VESTGVFT               VIISAPS  APMFV+GVN  +Y
Sbjct:    3 IKVGINGFGRIGRILLSNALEKPELSVVAVNDPFIEPTYAAYMLKYDSSHGLFKG-DIEV-DGQNLVVNGKPIRFYSERDPANIKWSETGAEYIVESTGVFTTIDKAKAHLNGGAKKVIISAPSADAPMFVMGVNHKDY 139          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 8.738e-31
Identity = 69/139 (49.64%), Postives = 89/139 (64.03%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEY 505
            VK+GINGFGRIGR+V R  ++ DD+ +VAVNDPFI   Y  +M +YD+ HG +K   ++V D   L+   K V  +  R+P  IPW+ETGA+Y+VESTGVFT               VIISAPS  APM+V+GVN   Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHDDIHIVAVNDPFIEPKYAAYMLRYDTTHGNFK-GTIEV-DGADLVVNGKKVKFYTERDPAAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGVNNETY 139          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P_CLAPU (Glyceraldehyde-3-phosphate dehydrogenase OS=Claviceps purpurea GN=GPD-1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 8.738e-31
Identity = 72/139 (51.80%), Postives = 89/139 (64.03%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEY 505
            VK+GINGFGRIGR+V R  ++  ++E+VAVNDPFI  +Y  +M KYDS HG +K  E+K KD   L+   K V     R+P  IPW  +GAEY+VESTGVFT               VIISAPS  APM+V+GVNE  Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEIEVVAVNDPFIDPEYAAYMLKYDSSHGVFK-GEIK-KDADGLIVNGKKVKFHTERDPSAIPWKASGAEYIVESTGVFTTTEKAKAHLTGGAKKVIISAPSADAPMYVMGVNEKTY 139          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P1_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agaricus bisporus GN=gpd1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 8.738e-31
Identity = 67/142 (47.18%), Postives = 91/142 (64.08%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEYKPE 514
            V +GINGFGRIGRLV R  LQ   + +VAVNDPF+  +YM ++FKYDSVHG+++  +++ KD K ++ G K +  F  R P  I WA+ GAEY+VESTGVF                V+I+AP    P +VVGVN ++Y P+
Sbjct:    2 VNVGINGFGRIGRLVLRNALQMQILTVVAVNDPFLDVEYMAYLFKYDSVHGRYQ-GKVETKDGKLIIDGHK-IAAFAEREPANIKWADCGAEYIVESTGVFKTEELAKEHLKGGAKKVVITAPGSGVPTYVVGVNLDKYDPK 141          
The following BLAST results are available for this feature:
BLAST of DR404090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
G3P_PODAN3.922e-3151.80Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]
G3P2_SCHPO3.922e-3150.00Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schi... [more]
G3P_ZYGRO5.123e-3145.07Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosa... [more]
G3P_USTMA5.123e-3147.59Glyceraldehyde-3-phosphate dehydrogenase OS=Ustila... [more]
G3P_ASPNG5.123e-3147.89Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P1_CANGA6.691e-3142.66Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Cand... [more]
G3P_TRIAT8.738e-3148.92Glyceraldehyde-3-phosphate dehydrogenase OS=Tricho... [more]
G3P_NEUCR8.738e-3149.64Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]
G3P_CLAPU8.738e-3151.80Glyceraldehyde-3-phosphate dehydrogenase OS=Clavic... [more]
G3P1_AGABI8.738e-3147.18Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agar... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245E02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404090 ID=DR404090; Name=DR404090; organism=Citrus sinensis; type=EST; length=517bp
GGGGACCACGACTGCTCTCCCTACTCTCTACAACTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACACACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCAGCAAGGCTGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACG
AGTACAAACCAGAGCTC
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