DR404090

Overview
NameDR404090
Unique NameDR404090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.444e-25
Identity = 65/148 (43.92%), Postives = 86/148 (58.11%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTHMFKYDSVHGQW------KHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEYKPE 514
            ++GINGFGRIGRLV RV+L R     +V +NDPFITTD M ++FKYD+VHG++      K  +L++    TL      + V   +NP EIPW  +  E V+ES+G FT               V+I+APS  APMFV GVN    K +
Sbjct:    4 RVGINGFGRIGRLVLRVLLSRGMPANVVLINDPFITTDAMAYIFKYDTVHGRFPGTVVGKEGKLEI----TLNGHVYDIAVSACKNPAEIPWGASNVEVVIESSGAFTTMEKAHLHQQGGAKKVLITAPSADAPMFVYGVNHQSLKAD 147          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 9.358e-25
Identity = 62/145 (42.76%), Postives = 84/145 (57.93%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---AAPMFVVGVNENEYKPE 514
            +KIGINGFGRIGRLVAR+ +    V LV +ND  +    + ++FKYDS HG +      V  ++ ++  ++ +  F  RNP ++PW + GA+YVVESTG+FT               VIISAPSK     P FVVGVN   Y  +
Sbjct:    2 LKIGINGFGRIGRLVARIAMANPQVTLVGIND-LVPASNLAYLFKYDSTHGSYGG--TVVAKEEGIVIDDQFIPCFSQRNPAQLPWGDLGADYVVESTGLFTTYATAENHLKAGAKRVIISAPSKDPEKIPTFVVGVNHLNYNAD 143          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3PA_GUITH (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Guillardia theta GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.723e-24
Identity = 62/144 (43.06%), Postives = 89/144 (61.81%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVV-GVNENEYK 508
            M  V  GINGFGRIGRLVAR++++  + +L+ VN    T DYM + FKYDS+HG+++  ++ V  D  ++ G++ +T    R+P++I WA+TG EY+ ESTGVF                VI SAP+K   + VV GVN  +YK
Sbjct:   46 MQAVPCGINGFGRIGRLVARIMIKDPETKLLQVNAGSATPDYMAYQFKYDSIHGRYQ-GDVVVDGDDLVIDGQRVITT-RARDPKDIGWAKTGVEYLCESTGVFLTAEKAQPHIDAGVKKVIFSAPAKDDSLTVVMGVNAEDYK 187          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3PG_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 3.556e-24
Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVI----LQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVK-------DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKAAPMFVVGVNENEYKP 511
            +K+GINGFGRIGR+V + +    L  +++++VAV D      Y  +  KYDSVHG++KH     K       DD  ++ G + + V   RNP ++PW + G EYV+ESTG+FT               V+ISAP S  A  FV+GVN N Y P
Sbjct:    3 IKVGINGFGRIGRMVFQALCDDGLLGNEIDVVAVVDMNTDARYFAYQMKYDSVHGKFKHSVSTTKSKPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTVKSAAEGHLRGGARKVVISAPASGGAKTFVMGVNHNNYNP 155          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P_LACDT (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Lactarius deterrimus GN=GPD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.644e-24
Identity = 59/115 (51.30%), Postives = 76/115 (66.09%), Query Frame = 2
Query:  161 VELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVVGVNENEY 505
            V+++AV+DPFI   YM +MFKYDSVHG++K   +++KD K ++ G  P+TVF  R+P  I W   GA+YVVES+GVFT               VIISAPS  APMFVVGVN + Y
Sbjct:    6 VKVLAVSDPFIDLQYMVYMFKYDSVHGRFKG-TVEIKDGKLVIDGH-PITVFQERDPANIQWGSVGADYVVESSGVFTTVDKASAHLKGGAKKVIISAPSADAPMFVVGVNLDAY 118          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4)

HSP 1 Score: 110.538 bits (275), Expect = 4.644e-24
Identity = 61/147 (41.50%), Postives = 87/147 (59.18%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---AAPMFVVGVNENEYKP 511
            M K+K+GINGFGRIGRLV R  +   ++E V +ND  +  D + ++ KYDS HG+ +  +++ KDD  ++ G   +    VRNP E+PW + GA+YVVESTG+FT               VIISAP+K        +VGVN + + P
Sbjct:    1 MAKLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGKLRS-QVEAKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGAKRVIISAPTKDPDRVRTLLVGVNHDLFDP 144          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 4.644e-24
Identity = 61/147 (41.50%), Postives = 87/147 (59.18%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---AAPMFVVGVNENEYKP 511
            M K+K+GINGFGRIGRLV R  +   ++E V +ND  +  D + ++ KYDS HG+ +  +++ KDD  ++ G   +    VRNP E+PW + GA+YVVESTG+FT               VIISAP+K        +VGVN + + P
Sbjct:    1 MAKLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGRLRS-QVETKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGARRVIISAPTKDPDRVRTLLVGVNHDLFDP 144          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.035e-23
Identity = 59/143 (41.26%), Postives = 87/143 (60.84%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKAAPMFVV-GVNENEYKPE 514
            +K+GINGFGRIGR   R    R+++E+VA+ND      ++ H+ KYDSVHG +K   ++ KDD  ++ G K + VF  ++P +IPW + G + V+E+TGVF                VII+AP+K   + VV GVNE +Y P+
Sbjct:    3 IKVGINGFGRIGRSFFRASWGREEIEIVAIND-LTDAKHLAHLLKYDSVHGIFK-GSVEAKDDSIVVDG-KEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPK 142          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.931e-23
Identity = 60/140 (42.86%), Postives = 82/140 (58.57%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-AAPMFVVGVNENEY 505
            +KIGINGFGRIGR+V R    RDD+E+V +ND  I  +YM +M KYDS HG++    ++VKD   ++ G K + V   R+P  + W   G +  VE+TG+F                V+++ PSK A PMFV GVN N Y
Sbjct:    3 IKIGINGFGRIGRIVFRAAQHRDDIEVVGIND-LIDVEYMAYMLKYDSTHGRF-DGTVEVKDGNLVVNG-KTIRVTAERDPANLNWGAIGVDIAVEATGLFLTDETARKHITAGAKKVVLTGPSKDATPMFVRGVNFNAY 139          
BLAST of DR404090 vs. ExPASy Swiss-Prot
Match: G3P1_ESCF3 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gapA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.135e-23
Identity = 57/140 (40.71%), Postives = 84/140 (60.00%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTHMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-AAPMFVVGVNENEY 505
            +K+GINGFGRIGR+V R   +R D+E+VA+ND  +  DYM +M KYDS HG++    ++VKD   ++ G+K + V   R+P  + W E G + V E+TG+F                V+++ PSK   PMFV G N ++Y
Sbjct:    3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKY 139          
The following BLAST results are available for this feature:
BLAST of DR404090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
G3P_MASBA1.444e-2543.92Glyceraldehyde-3-phosphate dehydrogenase OS=Mastig... [more]
G3P1_SYNY39.358e-2542.76Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Syne... [more]
G3PA_GUITH2.723e-2443.06Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]
G3PG_TRYBB3.556e-2440.52Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3P_LACDT4.644e-2451.30Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P1_ANAVT4.644e-2441.50Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P1_ANASP4.644e-2441.50Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P_AQUAE1.035e-2341.26Glyceraldehyde-3-phosphate dehydrogenase OS=Aquife... [more]
G3P_HAEIN3.931e-2342.86Glyceraldehyde-3-phosphate dehydrogenase OS=Haemop... [more]
G3P1_ESCF35.135e-2340.71Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245E02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404090 ID=DR404090; Name=DR404090; organism=Citrus sinensis; type=EST; length=517bp
GGGGACCACGACTGCTCTCCCTACTCTCTACAACTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACACACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCAGCAAGGCTGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACG
AGTACAAACCAGAGCTC
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