CX069873

Overview
NameCX069873
Unique NameCX069873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9464 contig Csv1_Contig9464:23..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.147e-14
Identity = 64/232 (27.59%), Postives = 99/232 (42.67%), Query Frame = 1
Query:  115 ASLSHSNGTIPAEFVRPEKEQP---ASATYHGPAPEIPTIDLDDPVQD-RLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKE-VYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWP--PSSINYRFWPNNPPSYRAVNEEYAKYMREV----VDKLFTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            A++      IP++F+ PE E P   A+   H P  +I  +   DP     + R + EA    G FQV NHGI ++L+         FF +P  EK+     P ++    GY +        K  W + L  R  P  P+ +           +R + E YA+Y  E+    ++ +               +   G D I   +++NYYPPC RP   LG   H D ++LT+L
Sbjct:    8 AAVLSGRADIPSQFIWPEGESPTPDAAEELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGES---CGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSI---MRLNYYPPCQRPLETLGTGPHCDPTSLTIL 233          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.957e-14
Identity = 64/232 (27.59%), Postives = 98/232 (42.24%), Query Frame = 1
Query:  115 ASLSHSNGTIPAEFVRPEKEQP---ASATYHGPAPEIP-TIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKE-VYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWP--PSSINYRFWPNNPPSYRAVNEEYAKYMREV----VDKLFTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            A++      IP++F+ PE E P   A+   H P   I   +  D      + R + EA    G FQV NHGI ++L+         FF +P  EK+    RP ++    GY +        K  W + L  R  P  P+ +           +R + E YA+Y  E+    ++ +               +   G D I   +++NYYPPC RP   LG   H D ++LT+L
Sbjct:    8 AAVLSGRSDIPSQFIWPEGESPTPDAAEELHVPLINIGGMLSGDAAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESC---GYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSI---MRLNYYPPCQRPLETLGTGPHCDPTSLTIL 233          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.556e-14
Identity = 57/199 (28.64%), Postives = 85/199 (42.71%), Query Frame = 1
Query:  199 GPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEK-EVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYR---AVNEEYAKYMREVVDKL----FTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALT 771
            G    +P +D+ DP       ++A A+++WG F +  HG+P +L+  ++A     F LP  EK     RP D+    GYG+        K  W +          S   + WP     YR   AV EE+ + MR + DKL                    E    + +   + +N+YP CP P  ALG++AHTD    T
Sbjct:   44 GGPDAVPVVDMRDPCA---AEAVALAAQDWGAFLLEGHGVPLELLAGVEAAIGGMFALPASEKMRAVRRPGDS---CGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFT 236          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.338e-14
Identity = 59/233 (25.32%), Postives = 102/233 (43.78%), Query Frame = 1
Query:  121 LSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDL------DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRF--------WPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            L+  +  IP +FV P+ E+P++        ++P IDL      D  +     R +++A+ + G F +TNHG+   L+ +       FF+ P  EK+   R     +  GY +        K  W + L  +  P   I+ +           +    +  V +EYA+ M  +  K+               KE    +D + + ++NYYP C +P+LALG   H D ++LT+L
Sbjct:   30 LNQHSHHIPQQFVWPDHEKPSTDVQ---PLQVPLIDLAGFLSGDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPACEKQKAQRKWG--ESSGYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFF--EDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTIL 255          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.691e-13
Identity = 50/191 (26.18%), Postives = 90/191 (47.12%), Query Frame = 1
Query:  217 PTIDLD---DPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            P +D+D      +   +  I +A   WG F++ NHGI ++L+  ++ + K+ ++   E++  +     AK ++     +Q E+     W    F R  P S+I+    P+    YR   +E+A  + ++ +KL               K+A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L
Sbjct:    5 PVVDMDLINGEERAATLEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQR--FKEMVAAKGLEA----VQSEIH-YLDWESTFFLRHLPSSNISEI--PDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 186          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.691e-13
Identity = 46/191 (24.08%), Postives = 89/191 (46.60%), Query Frame = 1
Query:  208 PEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEA-AGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            P I   +++D  + +++  I +A + WG F++ NHGIP + +  ++ + ++ ++   EE+         + V   G +  +       W    F R  P S+I+     +    Y+ + +E+AK +  + ++L               K+A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L
Sbjct:    5 PIINLENINDDGRAKILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEER-------FKETVLSKGLEAAQAEVNDMDWESTFFLRHLPESNISQ--MSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 186          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.295e-13
Identity = 59/199 (29.65%), Postives = 90/199 (45.23%), Query Frame = 1
Query:  214 IPTIDL-----DDPVQDR-LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQE-EKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWP----PSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            IPTIDL      D ++ +  +  I EA+ +WG FQV NHG+  +L+ K++   ++F E P E  K++YSR    K +  Y +          +W D  +  + P    P  +        P   R V  EY+K +  + + LF              K+      +  +   +Y+PPCP PDL  G   H+D S LTVL
Sbjct:   64 IPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFI--YLSNFDLYTAAAANWRDTFYCYMAPDPPEPQDL--------PEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRML--CHYFPPCPEPDLTFGTSKHSDGSFLTVL 250          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.074e-12
Identity = 51/191 (26.70%), Postives = 90/191 (47.12%), Query Frame = 1
Query:  208 PEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            P I    L+   +D  +  I +A   WG F++ NHGIP +++  ++ + K  ++   E++  +     +K ++     +Q EV     W    F R  P S+I+    P+    YR V  ++AK + ++ ++L               K+A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L
Sbjct:    5 PIINLEKLNGSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQR--FKELVASKGLEA----VQAEVTDL-DWESTFFLRHLPVSNISEV--PDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 186          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.074e-12
Identity = 59/195 (30.26%), Postives = 88/195 (45.13%), Query Frame = 1
Query:  214 IPTIDL------DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQE-EKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            IPTIDL      D   ++  +  I EA+ +WG FQV NHG+  +L+ K++   ++F E  QE  KE YSR    + +  Y +          +W D  F     P +   +   + P   R +  EY+K +  +   LF               +      +  ++  +YYPPCP PDL LG   H+D S LTVL
Sbjct:   64 IPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFL--YLSNFDLFSSPAANWRD-TFSCTMAPDTPKPQ---DLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGL--LMLSHYYPPCPEPDLTLGTSQHSDNSFLTVL 250          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12
Identity = 49/176 (27.84%), Postives = 83/176 (47.16%), Query Frame = 1
Query:  265 IAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEE--KEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEA-AGGDD--IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            + +A   WG F++ NHGI  +L+ +++AV KE +   +E+  KE  S+  D+         ++        W    F R  P S+I+    P+     RA  +E+A+ + ++ ++L               K    GG D    +  K++ YPPCP+PDL  G+ AHTD   + +L
Sbjct:   26 LRDACENWGFFELLNHGISHELMNRVEAVNKEHYRRFREQRFKEFASKTLDS---------VENVDPDNLDWESTFFLRHLPTSNISQI--PDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 190          
The following BLAST results are available for this feature:
BLAST of CX069873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
GAO1D_WHEAT1.147e-1427.59Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
GAO1A_WHEAT1.957e-1427.59Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
G3O21_WHEAT2.556e-1428.64Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
GAOX3_ARATH3.338e-1425.32Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
ACCO2_MALDO3.691e-1326.181-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_CUCME3.691e-1324.081-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCH2_ARATH6.295e-1329.651-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO3_PETHY1.074e-1226.701-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCH3_ARATH1.074e-1230.261-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO2_DORSP1.402e-1227.841-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13D05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13D05-G9-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069873 ID=CX069873; Name=CX069873; organism=Citrus sinensis; type=EST; length=779bp
CACAGTCGCAGGAAAGGCGCAAGCCAAGAAAGAGAGAGGGAGAGAAGGAA
AAGAAAAGTGGTGGGGTTTTGCTGGAAAATAAAATTAATGGAGGTGGAGA
GGGTCCAAGCCATTGCTTCCTTATCCCATTCAAATGGCACAATTCCAGCA
GAGTTCGTAAGACCCGAAAAAGAACAGCCAGCAAGCGCAACGTACCACGG
CCCCGCTCCTGAAATCCCCACGATCGATCTCGACGACCCCGTTCAAGACA
GACTCGTACGTTCCATCGCGGAAGCCAGCCGGGAGTGGGGGATTTTCCAG
GTTACAAACCACGGGATACCTAGTGACCTCATCGGTAAACTGCAAGCCGT
CGGCAAAGAATTTTTTGAGCTCCCTCAGGAAGAGAAAGAAGTGTATTCTC
GTCCGGCTGATGCAAAAGACGTGCAAGGATACGGCACAAAGTTACAGAAA
GAAGTCGAAGGAAAGAAATCTTGGGTTGATCATCTCTTCCACAGGGTTTG
GCCTCCGTCTTCTATCAACTACCGCTTTTGGCCCAACAACCCTCCTTCTT
ACCGAGCGGTGAATGAGGAGTATGCAAAGTACATGAGGGAGGTGGTGGAT
AAGTTGTTTACGTATCTTTCGTTGGGACTGGGTGTCGAAGGAGGTGTTTT
GAAAGAAGCAGCGGGAGGAGACGACATTGAGTACATGCTCAAGATTAATT
ACTATCCGCCATGCCCACGTCCTGATCTTGCTCTTGGAGTGGTGGCCCAC
ACTGATCTTTCCGCCCTCACCGTTCTTGT
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