CX069873

Overview
NameCX069873
Unique NameCX069873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9464 contig Csv1_Contig9464:23..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12
Identity = 48/193 (24.87%), Postives = 90/193 (46.63%), Query Frame = 1
Query:  211 EIPTIDLDDPV---QDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEA-AGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            + P +DL   +   +D+ +  I +A   WG F++ NHG+P DL+   + + KE +++  E+K  ++    +K ++     L++EVE    W    + R  P S  N    P+    YR   +++ K +  + + L               K+   G     +  K++ YP CP+P++  G+ AHTD   + +L
Sbjct:    6 KFPVVDLSKLIGEERDQTMALINDACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQK--FNDMLKSKGLE----NLEREVE-DVDWESTFYLRHLPQS--NLYDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILL 189          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.832e-12
Identity = 50/191 (26.18%), Postives = 90/191 (47.12%), Query Frame = 1
Query:  208 PEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            P I   +L+   + + +  I +A   WG F++ NHGIP +++  ++ + K  ++   E++  +     +K ++     +Q EV     W    F R  P S+I+    P+    YR V  ++AK + ++ ++L               K A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L
Sbjct:    5 PIINLENLNGDERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQR--FKELVASKGLEA----VQAEVTDL-DWESTFFLRHLPTSNISQV--PDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 186          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.392e-12
Identity = 51/191 (26.70%), Postives = 91/191 (47.64%), Query Frame = 1
Query:  217 PTIDLDD---PVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            P I+L++     +D  +  I +A   WG F++ NHGIP +++  ++   K  ++   E++  +     +K ++     +Q EV     W    F R  P S+I+    P+    YR V  ++AK + ++ ++L               K+A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L
Sbjct:    5 PIINLENLCGAERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQR--FKELVASKGLEA----VQAEVTDL-DWESTFFLRHLPVSNISEV--PDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 186          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.329e-12
Identity = 47/172 (27.33%), Postives = 82/172 (47.67%), Query Frame = 1
Query:  265 IAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            I +A   WG F++ NHGIP +++  ++ + K  ++   E++  +     +K ++     +Q EV     W    F R  P S+I+    P+    YR V  ++AK + ++ ++L               K A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L
Sbjct:   24 IKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQR--FKELVASKGLEA----VQAEVTDL-DWESTFFLRHLPTSNISQV--PDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 186          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.329e-12
Identity = 47/172 (27.33%), Postives = 83/172 (48.26%), Query Frame = 1
Query:  265 IAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            I +A   WG F++ NHGIP +++  ++ + K  ++   E++  +     +K ++G    +Q EV     W    F +  P S+I+    P+    YR V  ++AK + ++ ++L               K A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L
Sbjct:   24 IKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQR--FKELVASKALEG----VQAEVTDM-DWESTFFLKHLPISNISEV--PDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 186          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.187e-11
Identity = 48/177 (27.12%), Postives = 81/177 (45.76%), Query Frame = 1
Query:  256 VRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFE--LPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            +  I +A   WG F++ +HGIP++ +  ++ + KE +   L Q  KE+         V   G +  K       W    + R  P S+I+    P+    YR V +E+A  + ++ ++L               K+A  G +   +  K++ YPPCP P+L  G+ AHTD   L +L
Sbjct:   21 MEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKEL---------VASKGLEAVKTEVNDMDWESTFYLRHLPKSNISEV--PDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILL 186          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.187e-11
Identity = 49/173 (28.32%), Postives = 80/173 (46.24%), Query Frame = 1
Query:  265 IAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKD-VQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            I +A   WG FQV NH +  +L+ K++ + KE ++  +E+K         KD VQ  G    +       W    + R  P S+I+    P+    YR + +E+A  +  + ++L               K A  G +   +  K++ YPPCP+PDL  G+ AHTD   + +L
Sbjct:   30 IKDACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQK--------FKDMVQTKGLVSAESQVNDIDWESTFYLRHRPTSNISEV--PDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 192          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.551e-11
Identity = 47/172 (27.33%), Postives = 82/172 (47.67%), Query Frame = 1
Query:  265 IAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            I +A   WG F+  NHGI  +++  ++ + KE ++   E++  +      K ++     +Q E++    W    F R  P SSI+    P+    YR V +E+A  + E+ ++L               K+A  G     +  K++ YPPCP+P+L  G+ AHTD   + +L
Sbjct:   24 IKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQR--FKEMVATKGLEC----VQSEIDDL-DWESTFFLRHLPVSSISEI--PDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILL 186          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.454e-11
Identity = 48/172 (27.91%), Postives = 82/172 (47.67%), Query Frame = 1
Query:  265 IAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEA-AGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            I +A   WG F++ NHGIP +L+  ++ V K  ++   E++  +     +K ++G    +Q EV     W    F R  P S+I+    P+    YR V +++A+ + ++ + L               K+A  G     +  K+  YPPCP+ DL  G+ AHTD   + +L
Sbjct:   24 INDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQR--FKELVASKALEG----IQAEVT-DMDWESTYFLRHLPQSNISE--VPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILL 186          
BLAST of CX069873 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.512e-11
Identity = 44/175 (25.14%), Postives = 82/175 (46.86%), Query Frame = 1
Query:  256 VRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVL 777
            +  I +A   WG F++ NHG+ ++L+  ++ + K+ ++   E++  +     AK +      +Q E+     W    F R  P S+I+    P+    YR   +E+A  + ++ +KL               K+   G     +  K++ YPPCP+PDL  G+ AH+D   + +L
Sbjct:   21 LEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQR--FKEMVAAKGLDD----VQSEIHDL-DWESTFFLRHLPSSNISEI--PDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILL 186          
The following BLAST results are available for this feature:
BLAST of CX069873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
ACCO1_BRAJU1.402e-1224.871-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO4_SOLLC1.832e-1226.181-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO4_PETHY2.392e-1226.701-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC5.329e-1227.331-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO1_PETHY5.329e-1227.331-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO_PRUMU1.187e-1127.121-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO_DIACA1.187e-1128.32Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO_PEA1.551e-1127.331-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO_DIOKA3.454e-1127.911-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO1_MALDO4.512e-1125.141-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13D05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13D05-G9-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069873 ID=CX069873; Name=CX069873; organism=Citrus sinensis; type=EST; length=779bp
CACAGTCGCAGGAAAGGCGCAAGCCAAGAAAGAGAGAGGGAGAGAAGGAA
AAGAAAAGTGGTGGGGTTTTGCTGGAAAATAAAATTAATGGAGGTGGAGA
GGGTCCAAGCCATTGCTTCCTTATCCCATTCAAATGGCACAATTCCAGCA
GAGTTCGTAAGACCCGAAAAAGAACAGCCAGCAAGCGCAACGTACCACGG
CCCCGCTCCTGAAATCCCCACGATCGATCTCGACGACCCCGTTCAAGACA
GACTCGTACGTTCCATCGCGGAAGCCAGCCGGGAGTGGGGGATTTTCCAG
GTTACAAACCACGGGATACCTAGTGACCTCATCGGTAAACTGCAAGCCGT
CGGCAAAGAATTTTTTGAGCTCCCTCAGGAAGAGAAAGAAGTGTATTCTC
GTCCGGCTGATGCAAAAGACGTGCAAGGATACGGCACAAAGTTACAGAAA
GAAGTCGAAGGAAAGAAATCTTGGGTTGATCATCTCTTCCACAGGGTTTG
GCCTCCGTCTTCTATCAACTACCGCTTTTGGCCCAACAACCCTCCTTCTT
ACCGAGCGGTGAATGAGGAGTATGCAAAGTACATGAGGGAGGTGGTGGAT
AAGTTGTTTACGTATCTTTCGTTGGGACTGGGTGTCGAAGGAGGTGTTTT
GAAAGAAGCAGCGGGAGGAGACGACATTGAGTACATGCTCAAGATTAATT
ACTATCCGCCATGCCCACGTCCTGATCTTGCTCTTGGAGTGGTGGCCCAC
ACTGATCTTTCCGCCCTCACCGTTCTTGT
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