CX069872

Overview
NameCX069872
Unique NameCX069872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.717e-28
Identity = 72/203 (35.47%), Postives = 108/203 (53.20%), Query Frame = -3
Query:  195 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDE----NPPKYKAKKFKDY 785
            W    F R  P S+I+    P+    YR V  ++ K + ++ ++L              LK    G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD RWID   + +++++++GDQ+E+++NGKYK+V+HR    KD TRMS   F  P  D ++ P P LVD E    N   Y    F DY
Sbjct:   86 WESTFFLRHLPSSNISQL--PDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDY 286          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.717e-28
Identity = 71/202 (35.15%), Postives = 111/202 (54.95%), Query Frame = -3
Query:  195 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVD---DENPPKYKAKKFKDY 785
            W    F +  P S+I+    P+    YR V  ++AK + ++ ++L              LK A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD +WID   + +++++++GDQ+E+++NGKYK+V+HR    KD  RMS   F  P +D V+ P P LV+   +EN   Y    F DY
Sbjct:   86 WESTFFLKHLPISNISEV--PDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDY 285          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.548e-28
Identity = 68/197 (34.52%), Postives = 102/197 (51.78%), Query Frame = -3
Query:  216 EVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYK 806
            E  G+K W+D L   ++P  S + + WP+ P   R V   Y    R V  ++                    G  +  ++ INYYPP P P   LG+  H D   +TVL+P  VPGL++     WI  + +PN+L+I+ G Q+E+++NG  KAV HR   N  + R+S   F+ P  D VVGP  + V ++NPP+Y+
Sbjct:  112 ETLGEKYWIDVL-ELLYPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRV--VVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFAEPRLSVASFIVPADDCVVGPAEEFVSEDNPPRYR 305          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28
Identity = 71/202 (35.15%), Postives = 111/202 (54.95%), Query Frame = -3
Query:  195 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVD---DENPPKYKAKKFKDY 785
            W    F R  P S+I+    P+    YR V  ++AK + ++ ++L              LK A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD++WID   + +++++++GDQ+E+++NGKYK+VLHR     D TRMS   F  P +D V+ P   LV+   +E+   Y    F DY
Sbjct:   86 WESTFFLRHLPTSNISQV--PDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFVFDDY 285          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27
Identity = 74/204 (36.27%), Postives = 110/204 (53.92%), Query Frame = -3
Query:  180 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKL 785
            W    F R  P S+I+    P+    YR V +++A+ + ++ + L              LK+A  G     +  K+  YPPCP+ DL  G+ AHTD   + +L  ++ V GLQ+ KDD+WID   + ++++I++GDQ+E+++NGKYK+VLHR     D TRMS   F  P  D V+ P P LV+ E   K    KF    Y KL
Sbjct:   86 WESTYFLRHLPQSNISEV--PDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKL 287          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27
Identity = 74/205 (36.10%), Postives = 112/205 (54.63%), Query Frame = -3
Query:  180 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVD-DENPPKYKAKKFKDYSYCKL 785
            W    F R  P S+I+    P+    +R   +E+A+ + ++ ++L              LK+A  G     +  K++ YPPCPRP+L  G+ AHTD   + +L   N+V GLQ+ KD  WID   + ++++I+IGDQ+E+++NGKYK+V+HR     D  RMS   F  P +D V+ P P LVD +E+  K    KF    Y KL
Sbjct:   86 WESTFFLRHLPVSNISEI--PDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVDKEEDQQKQVYPKFVFEDYMKL 288          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27
Identity = 70/201 (34.83%), Postives = 108/201 (53.73%), Query Frame = -3
Query:  195 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDD--ENPPKYKAKKFKDY 785
            W    F R  P S+I+    P+    YR   +E+A  + ++ +KL              LK+A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD  W+D   + ++++I++GDQIE+++NGKYK+++HR     D TRMS   F  P  D  + P P L+++  E  P Y    F DY
Sbjct:   86 WESTFFLRHLPSSNISEI--PDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGTRMSIASFYNPGDDAFISPAPALLEEKSEVSPTYPKFLFDDY 284          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.004e-27
Identity = 75/215 (34.88%), Postives = 108/215 (50.23%), Query Frame = -3
Query:  195 VQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 836
            ++GYG       E K  W D  F    P    N RFWP +P S+R   E+Y+  +++V   L              L +        +  +    P        LG+  H+D + LT+L+  NEV GL + KD++W+  K I  A +++IGD IEI+SNG YK++ HR  +N DK R+S   F +P   T +GPLP LV  EN  KYK   ++DY
Sbjct:  122 MEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLR---TVFNREDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLV-KENGVKYKTIDYEDY 332          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.004e-27
Identity = 73/210 (34.76%), Postives = 114/210 (54.29%), Query Frame = -3
Query:  195 LQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLV-DDENPPKYKAKKFKDY 815
            +Q E++    W    F R  P SSI+    P+    YR V +E+A  + E+ ++L              LK+A  G     +  K++ YPPCP+P+L  G+ AHTD   + +L  ++ V GLQ+ KDD+WID   + ++++I++GDQ+E+++NGKYK+V+HR     D  RMS   F  P  D V+ P   L+ ++E    Y    F DY
Sbjct:   77 VQSEIDDL-DWESTFFLRHLPVSSISEI--PDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGDDAVISPASTLLKENETSEVYPKFVFDDY 283          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.124e-27
Identity = 73/215 (33.95%), Postives = 113/215 (52.56%), Query Frame = -3
Query:  174 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEA-AGGDD--IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKK-------FKDYSYCKLNK 785
            W    F R  P S+I+    P+     R+  +E+A  +  + ++L              LK+   GG D    +  K++ YPPCP+P+L  G+ AHTD   + +L  ++ V GLQ+ KD  WID   + ++++++IGDQ+E+++NGKYK+VLHR     D  RMS   F  P +D V+ P P LV+ E   K + KK       F+DY    + K
Sbjct:   88 WESTFFLRHLPTSNISQI--PDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEKEEKKKEIYPKFVFQDYMNLYIRK 300          
The following BLAST results are available for this feature:
BLAST of CX069872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO2_SOLLC2.717e-2835.471-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_PETHY2.717e-2835.151-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
IDS2_HORVU3.548e-2834.52Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
ACCO1_SOLLC6.053e-2835.151-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_DIOKA1.032e-2736.271-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO_ACTDE1.032e-2736.101-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO2_MALDO1.032e-2734.831-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
NCS1_COPJA3.004e-2734.88S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
ACCO_PEA3.004e-2734.761-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_DORSP5.124e-2733.951-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13D05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13D05-G9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069872 ID=CX069872; Name=CX069872; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTAAAATGAAAGGATTATTTATTATTGCTAACACCCGCGATT
ACATTTCAGAAACAAGATCGCAACAACAAACAAGCATCGCTAACGTACAG
TGACGAGATCAAACATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCA
TAATGAAAAATCTACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATC
CTTGAACTTCTTGGCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCT
GAGGAAGGGGACCCACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGC
CACGACATTCTCGTCTTGTCCTTGTTAACAGTGGTTCTATGCAGCACGGC
TTTGTACTTGCCATTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGA
TGAGAGCGTTCGGGATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAG
ACTTGCAGACCAGGAACTTCATTGGGCACAAGAACGGTGAGGGCGGAAAG
ATCAGTGTGGGCCACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCG
GATAGTAATTAATCTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCT
TCTTTCAAAACACCTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAA
CAACTTATCCACCACCTCCCTCATGTACTTTGCATACTCCTCATTCACCG
CTCGGTAAGAAGGAGGGTTGTTGGGCCAAAAGCGGTAGTTGATAGAAGAC
GGAGGCCAAACCCTGTGGAAGAGATGATCAACCCAAGATTTCTTTCCTTC
GACTTCTTTCTGTAACTTTGTGCCGTATCCTTGCACGTCTTTTGCAT
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