CX069872

Overview
NameCX069872
Unique NameCX069872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 6.692e-27
Identity = 64/201 (31.84%), Postives = 99/201 (49.25%), Query Frame = -3
Query:  195 GKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 797
            G+K W D L      P   +   WP+ P   R V E++    R+V  +L               +    G ++  +L IN+YP CP PD ALG   H D + +T+L+P  V GL+V     WI     PNA +++ G Q+E+++NG  K++ HR   N    R S   F+ P  + ++GP  + +  ENPP Y+   F+D+
Sbjct:  115 GEKYWRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNV--ILNINHYPSCPNPDKALGQPPHCDRNLITLLLPGAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSALARTSVATFIMPTQECLIGPAKEFLSKENPPCYRTTMFRDF 313          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.740e-27
Identity = 68/201 (33.83%), Postives = 108/201 (53.73%), Query Frame = -3
Query:  195 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVD--DENPPKYKAKKFKDY 785
            W    F R  P S+I+    P+    YR   +E+A  + ++ +KL              LK+   G     +  K++ YPPCP+PDL  G+ AH+D   + +L  ++ V GLQ+ KD  W+D   + ++++I++GDQIE+++NGKYK+V+HR     D TRMS   F  P  D+ + P P +++   E+ P Y    F DY
Sbjct:   86 WESTFFLRHLPSSNISEI--PDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGTRMSIASFYNPGNDSFISPAPAVLEKKTEDAPTYPKFVFDDY 284          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.491e-26
Identity = 74/219 (33.79%), Postives = 115/219 (52.51%), Query Frame = -3
Query:  195 VQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPK---YKAKKFKDY 836
            V   G +  K       W    + R  P S+I+    P+    YR V +E+A  + ++ ++L              LK+A  G +   +  K++ YPPCP P+L  G+ AHTD   L +L  ++ V GLQ+ KD +WID   + ++++I++GDQ+E+++NGKY++V HR     D TRMS   F  P +D V+ P P LV+ E   K   Y    F+DY
Sbjct:   69 VASKGLEAVKTEVNDMDWESTFYLRHLPKSNISEV--PDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFVFEDY 285          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.947e-26
Identity = 69/204 (33.82%), Postives = 110/204 (53.92%), Query Frame = -3
Query:  195 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDI---EYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPK---YKAKKFKDY 785
            W    F R  P S+++    P+    +R V +E+A+ + ++ +++              LK A  G       +  K++ YPPCPRP+L  G+ AHTD   L +L  ++ V GLQ+ KD  W+D   + ++++I++GDQ+E+++NGKYK+V+HR     D  RMS   F  P +D V+ P P LV+ E   K   Y    F+DY
Sbjct:   85 WESTFFIRHLPVSNLSEI--PDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGNRMSLASFYNPGSDAVIFPAPALVEKEAEEKKEVYPKFVFEDY 286          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.947e-26
Identity = 62/179 (34.64%), Postives = 94/179 (52.51%), Query Frame = -3
Query:  204 WPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIE---YMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKF 728
            WP+NPP +    +EY + +R++ +K+              +K+A  GD      +  K+++YPPCPR DL  G+ AHTD   + +L  ++ V GLQ+ KD RWID + + +A++I+ GDQIE+LSNG+YK+  HR        R S   F  P     + P      +E  P     KF
Sbjct:  101 WPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAPAAGAATEEAAPPALYPKF 279          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.321e-26
Identity = 70/202 (34.65%), Postives = 109/202 (53.96%), Query Frame = -3
Query:  195 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVD---DENPPKYKAKKFKDY 785
            W    F R  P S+I     P+    YR V  ++AK + ++ ++L              LK+   G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD +WID   +  ++++++GDQ+E+++NGKYK+V+HR     D TRMS   F  P +D V+ P P LV+   +E+   Y    F DY
Sbjct:   86 WESTFFLRHLPVSNICEV--PDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLVEKEAEESKAIYPKFVFDDY 285          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.321e-26
Identity = 70/208 (33.65%), Postives = 112/208 (53.85%), Query Frame = -3
Query:  180 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLV--DDENPPKYKAKKFKDYS--YCKL 785
            W    + R  P S+I+    P+    YR + +E+A  +  + ++L              LK A  G +   +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD  W+D   + +++++++GDQ+E+++NGKYK+V+HR     D  RMS   F  P +D V+ P P LV  ++E    Y    F+DY   Y KL
Sbjct:   92 WESTFYLRHRPTSNISEV--PDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNLYLKL 297          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.321e-26
Identity = 72/213 (33.80%), Postives = 111/213 (52.11%), Query Frame = -3
Query:  174 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEA-AGGDD--IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLV-----DDENPPKYKAKKFKDYSYCKLNK 785
            W    F R  P S+I+    P+     RA  +E+A+ + ++ ++L              LK    GG D    +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD  WI+   +  +++++IGDQ+E+++NGKYK+VLHR     D  RMS   F  P +D V+ P P LV     ++E    Y    F+DY    + K
Sbjct:   88 WESTFFLRHLPTSNISQI--PDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRK 298          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.665e-26
Identity = 65/189 (34.39%), Postives = 101/189 (53.44%), Query Frame = -3
Query:  195 RFWPNNPPSYR---AVNEEYAKYMREVVDKLFTYXXXXXXXXXXXL----KEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 734
            + WP     YR   AV EE+ + MR + DKL              +     E    + +   + +N+YP CP P  ALG++AHTD    T ++ + VPGLQ+F+   DRW+    +P A+++++GD  +IL+NG++ +V HR  VN+D  R+S   FL PPA   V PL + +    P  Y+A  + +Y
Sbjct:  147 KLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREALAG-TPAAYRAVTWPEY 334          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.399e-26
Identity = 65/189 (34.39%), Postives = 101/189 (53.44%), Query Frame = -3
Query:  195 RFWPNNPPSYR---AVNEEYAKYMREVVDKLFTYXXXXXXXXXXXL----KEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 734
            + WP     YR   AV EE+ + MR + DKL              +     E    + +   + +N+YP CP P  ALG++AHTD    T ++ + VPGLQ+F+   DRW+    +P A+++++GD  +IL+NG++ +V HR  VN+D  R+S   FL PPA   V PL + +    P  Y+A  + +Y
Sbjct:  147 KLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREALAG-TPAAYRAVTWPEY 334          
The following BLAST results are available for this feature:
BLAST of CX069872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
IDS3_HORVU6.692e-2731.842'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
ACCO1_MALDO8.740e-2733.831-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO_PRUMU1.491e-2633.791-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO_PERAE1.947e-2633.821-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO_MUSAC1.947e-2634.641-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO_TOBAC3.321e-2634.651-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_DIACA3.321e-2633.65Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO2_DORSP3.321e-2633.801-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
G3O22_WHEAT5.665e-2634.39Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
G3O21_WHEAT7.399e-2634.39Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13D05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13D05-G9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069872 ID=CX069872; Name=CX069872; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTAAAATGAAAGGATTATTTATTATTGCTAACACCCGCGATT
ACATTTCAGAAACAAGATCGCAACAACAAACAAGCATCGCTAACGTACAG
TGACGAGATCAAACATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCA
TAATGAAAAATCTACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATC
CTTGAACTTCTTGGCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCT
GAGGAAGGGGACCCACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGC
CACGACATTCTCGTCTTGTCCTTGTTAACAGTGGTTCTATGCAGCACGGC
TTTGTACTTGCCATTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGA
TGAGAGCGTTCGGGATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAG
ACTTGCAGACCAGGAACTTCATTGGGCACAAGAACGGTGAGGGCGGAAAG
ATCAGTGTGGGCCACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCG
GATAGTAATTAATCTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCT
TCTTTCAAAACACCTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAA
CAACTTATCCACCACCTCCCTCATGTACTTTGCATACTCCTCATTCACCG
CTCGGTAAGAAGGAGGGTTGTTGGGCCAAAAGCGGTAGTTGATAGAAGAC
GGAGGCCAAACCCTGTGGAAGAGATGATCAACCCAAGATTTCTTTCCTTC
GACTTCTTTCTGTAACTTTGTGCCGTATCCTTGCACGTCTTTTGCAT
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