CX069872

Overview
NameCX069872
Unique NameCX069872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.262e-25
Identity = 70/220 (31.82%), Postives = 110/220 (50.00%), Query Frame = -3
Query:  171 EGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDD----ENP----PKYKAKKFKDYSYCKLNKL 800
            E  + W + + +  +P  + +Y  WP+ P  +RAV EEY+K +  +  KL              L +A    D++  + +NYYP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +D  + WI  K +  A ++++GD    LSNG++K   H+  VN   +R+S   F  P  + +V PL     +    E P      YK K   D    +L KL
Sbjct:  120 EAVQDWREIVTYFSYPIKARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACV--DMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSSTSRLSIATFQNPAPEAIVYPLKINEGEKSIMEEPMTFMEMYKKKMSTDLELARLKKL 337          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.262e-25
Identity = 69/204 (33.82%), Postives = 109/204 (53.43%), Query Frame = -3
Query:  195 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKT-RMSWPVFLEPPADTVVGPLPQLV----DDENPPKYKAKKFKDY 785
            W    F R  P S+I+     +    Y+ + +E+AK +  + ++L              LK+A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD  WID   + +A+++++GDQ+E+++NG+YK+V+HR       T RMS   F  P +D V+ P P LV    D+E    Y    F+DY
Sbjct:   86 WESTFFLRHLPESNISQM--SDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALVEKDQDEEKKEVYPKFVFEDY 287          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.262e-25
Identity = 52/126 (41.27%), Postives = 84/126 (66.67%), Query Frame = -3
Query:  192 NYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFL-EPP--ADTVVGPLPQLVDDENPPKYKAKKFKDYS 560
            NYYPPCP+P+L +G + HTD+  +T+L+ +++ GLQV   + W+D    P +L+++IGD +++LSN KY +V HR   N   +RMS   F  E P  +  + GP+ +L+ ++NPPKY+A   KD++
Sbjct:  219 NYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKDHT 344          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.648e-25
Identity = 64/189 (33.86%), Postives = 101/189 (53.44%), Query Frame = -3
Query:  195 RFWPNNPPSYR---AVNEEYAKYMREVVDKLFTYXXXXXXXXXXXL----KEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 734
            + WP     YR   AV EE+ + MR + DKL              +     E    + +   + +N+YP CP P  ALG++AHTD    T ++ + VPGLQ+F+   DRW+    +P A+++++GD  +IL+NG++ +V HR  VN++  R+S   FL PPA   V PL + +    P  Y+A  + +Y
Sbjct:  147 KLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISLGYFLGPPAHVKVAPLREALAG-TPAAYRAVTWPEY 334          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.812e-25
Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = -3
Query:  180 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEA-AGGDD--IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKA--KKFKDYSYCKL 785
            W    F R  P S+I+    P+      +  +E+A  + ++ ++L              LK    GG D    +  K++ YPPCP+P+L  G+ AHTD   + +L  ++ V GLQ+ KD+ WID   + ++++++IGDQ+E+++NGKYK+V+HR     +  RMS   F  P +D V+ P P+LV+ E   K K    KF    Y KL
Sbjct:   82 WESTFFLRHLPTSNISQV--PDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNGKYKSVMHRVVAQTNGNRMSIASFYNPGSDAVIFPAPELVEKEAAEKKKETYPKFVFEDYMKL 287          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.812e-25
Identity = 67/204 (32.84%), Postives = 107/204 (52.45%), Query Frame = -3
Query:  195 KKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDD--IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLV-DDENPPKYKAKKFKDY 794
            K  W    F R  P S+I     P+    YR + + +A  +  + ++L              L +A  G      +  K++ YPPCPRPDL  G+ AHTD   + +L  ++ V GLQ+ KD  W+D   + +++++++GDQ+E+++NG+YK+V+HR     D  RMS   F  P +D V+ P P LV ++E    Y    F+DY
Sbjct:   88 KLDWESTFFVRHLPESNI--ADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVMHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEEEAVVAYPKFVFEDY 289          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.672e-25
Identity = 67/204 (32.84%), Postives = 107/204 (52.45%), Query Frame = -3
Query:  195 KKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDD--IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLV-DDENPPKYKAKKFKDY 794
            K  W    F R  P S+I     P+    YR + + +A  +  + ++L              L +A  G      +  K++ YPPCPRPDL  G+ AHTD   + +L  ++ V GLQ+ KD  W+D   + +++++++GDQ+E+++NG+YK+V+HR     D  RMS   F  P +D V+ P P LV ++E    Y    F+DY
Sbjct:   88 KLDWESTFFVRHLPESNI--ADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVIHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEEEAVVAYPKFVFEDY 289          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.672e-25
Identity = 54/127 (42.52%), Postives = 82/127 (64.57%), Query Frame = -3
Query:  192 NYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNK-DKTRMSWPVFLEP---PADTVVGPLPQLVDDENPPKYKAKKFKDYS 560
            +YYPPCP PDL LG   H+D S LTVL+P+++ GLQV ++  W D  ++  ALII+IGD +++++N K+ ++ HR   N+  + R+S   F      P   + GP+ +LV +ENPPKY+    KDY+
Sbjct:  224 HYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEENPPKYRETTIKDYA 350          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.796e-25
Identity = 65/182 (35.71%), Postives = 96/182 (52.75%), Query Frame = -3
Query:  180 VNEEYAKYMREVVDKLFTYXXXXXXXXXXXL--------KEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKL 698
            ++EEY K M+E  D+L              L        K   G     +  K++ YPPCP+P+L  G+ AHTD   L +L  ++ V GL V KD +W+D   + ++++I++GDQ+E+++NGKYK+V+HR    +D  RMS   F  P  D V+ P P LV+ E        KF    Y KL
Sbjct:  107 LDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQEDGNRMSIASFYNPGNDAVIYPAPALVEGEQEKTKLYPKFVFDDYMKL 288          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.796e-25
Identity = 53/127 (41.73%), Postives = 81/127 (63.78%), Query Frame = -3
Query:  192 NYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNK-DKTRMSWPVFLE---PPADTVVGPLPQLVDDENPPKYKAKKFKDYS 560
            +Y+PPCP PDL  G   H+D S LTVL+P+ + GLQV ++  W D  ++P ALII+IGD +++++N K+ ++ HR   N+  + R+S   F      P   V GP+ +LV +ENPPKY+    +DY+
Sbjct:  224 HYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNPRVYGPIKELVSEENPPKYRETTIRDYA 350          
The following BLAST results are available for this feature:
BLAST of CX069872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FL3H_CALCH1.262e-2531.82Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
ACCO1_CUCME1.262e-2533.821-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCH3_SOLLC1.262e-2541.271-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G3O23_WHEAT1.648e-2533.86Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
ACCO_DENCR2.812e-2533.651-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO1_ORYSI2.812e-2532.841-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSJ3.672e-2532.841-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCH3_ARATH3.672e-2542.521-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO3_CUCME4.796e-2535.711-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCH2_ARATH4.796e-2541.731-aminocyclopropane-1-carboxylate oxidase homolog ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13D05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13D05-G9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069872 ID=CX069872; Name=CX069872; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTAAAATGAAAGGATTATTTATTATTGCTAACACCCGCGATT
ACATTTCAGAAACAAGATCGCAACAACAAACAAGCATCGCTAACGTACAG
TGACGAGATCAAACATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCA
TAATGAAAAATCTACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATC
CTTGAACTTCTTGGCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCT
GAGGAAGGGGACCCACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGC
CACGACATTCTCGTCTTGTCCTTGTTAACAGTGGTTCTATGCAGCACGGC
TTTGTACTTGCCATTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGA
TGAGAGCGTTCGGGATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAG
ACTTGCAGACCAGGAACTTCATTGGGCACAAGAACGGTGAGGGCGGAAAG
ATCAGTGTGGGCCACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCG
GATAGTAATTAATCTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCT
TCTTTCAAAACACCTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAA
CAACTTATCCACCACCTCCCTCATGTACTTTGCATACTCCTCATTCACCG
CTCGGTAAGAAGGAGGGTTGTTGGGCCAAAAGCGGTAGTTGATAGAAGAC
GGAGGCCAAACCCTGTGGAAGAGATGATCAACCCAAGATTTCTTTCCTTC
GACTTCTTTCTGTAACTTTGTGCCGTATCCTTGCACGTCTTTTGCAT
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