CX069872

Overview
NameCX069872
Unique NameCX069872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6139 contig Csv1_Contig6139:485..1331. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.068e-24
Identity = 64/192 (33.33%), Postives = 101/192 (52.60%), Query Frame = -3
Query:  183 WPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXL------KEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQV----FKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCK 728
            WP++   +  V EEY K M ++  +L +            L      K  +G D I+  L++N YP CP P LA+G+  HTD S LT+L    +PGL++     +  RWI  + I  +L++ +GD   I+SNG++++ +HR  VNK   R+S   F  PP +  +GPL    D  +PP Y+   +++Y   K
Sbjct:  147 WPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSAAYFAGPPKNLQIGPLTS--DKNHPPIYRRLIWEEYLAAK 336          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.822e-24
Identity = 66/221 (29.86%), Postives = 112/221 (50.68%), Query Frame = -3
Query:  171 EGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDD--RWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENP---------PKYKAKKFKDYSYCKLNKL 800
            E  + W + + +  +P    +Y  WP+ P ++R V ++Y+  +  +  KL              L +A    D++  + +N+YP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +DD   WI  + +  A ++++GD   +LSNG++K   H+  VN + +R+S   F  P  + +V PL  + + E P           YK K  KD    +L KL
Sbjct:  123 EAVQDWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACV--DMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSNSSRLSIATFQNPAQEAIVYPL-SVREGEKPILEAPITYTEMYKKKMSKDLELARLKKL 340          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.380e-24
Identity = 67/220 (30.45%), Postives = 108/220 (49.09%), Query Frame = -3
Query:  171 EGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDD--RWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDD----ENP----PKYKAKKFKDYSYCKLNKL 800
            E  + W + + +  +P  + +Y  WP+ P  +  V EEY++ +  +  KL              L  A    D++  + +NYYP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +DD   WI  + +  A ++++GD    LSNG++K   H+  VN + +R+S   F  P  +  V PL     +    E P      YK K  +D    +L KL
Sbjct:  121 EAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACV--DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKVREGEKAIMEEPITFAEMYKRKMGRDLELARLKKL 338          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.109e-24
Identity = 67/220 (30.45%), Postives = 108/220 (49.09%), Query Frame = -3
Query:  171 EGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDD--RWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDD----ENP----PKYKAKKFKDYSYCKLNKL 800
            E  + W + + +  +P  + +Y  WP+ P  +  V EEY++ +  +  KL              L  A    D++  + +NYYP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +D+   WI  + +  A ++++GD    LSNG++K   H+  VN + +R+S   F  P  D  V PL     +    E P      YK K  +D    +L KL
Sbjct:  122 EAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACV--DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVYPLKVREGEKAILEEPITFAEMYKRKMGRDLELARLKKL 339          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.045e-24
Identity = 68/224 (30.36%), Postives = 114/224 (50.89%), Query Frame = -3
Query:  174 LQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDD--RWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPL-----PQLVDDEN---PPKYKAKKFKDYSYCKLNK 815
            LQ EV   + W + + +  +P  + +Y  WP+ P  + AV ++Y++ + E+  KL              L +A    D++  + +N+YP CP PDL LG+  HTD   +T+L+ ++V GLQ  KD+   WI  + +  A ++++GD    LSNG++K   H+  VN + +R+S   F  P  + +V PL      + + DE       Y+ K  KD    +L K
Sbjct:  122 LQGEVV--QDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACV--DMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEAIVYPLKIREGEKSIMDEPITFAEMYRRKMSKDLELARLKK 341          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.543e-23
Identity = 69/238 (28.99%), Postives = 115/238 (48.32%), Query Frame = -3
Query:  141 GYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRF--------WPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ*IFHYEKN 830
            GY +        K  W + L  +  P   I+ +           +    +  V +EYA+ M  +  K+               KE    +D + + ++NYYP C +P+LALG   H D ++LT+L  ++V GLQVF D++W      P+A +++IGD    L+NG+YK+ LHR  VN ++ R ++  FL P  + VV P  +LV   N  K   +K+ D+++    +  Q  +  + N
Sbjct:  133 GYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFF--EDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKPPEELV---NGVKSGERKYPDFTWSMFLEFTQKHYRADMN 365          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.015e-23
Identity = 68/229 (29.69%), Postives = 110/229 (48.03%), Query Frame = -3
Query:  183 KDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINY--RFWPNNPPSYRAVNEEYAKYMREVVDKLF-----TYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDR-WIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPA-DTVVGPLPQLVDDENPPKYKAKKFKDYSYCK 842
            K V GYG         KK W +     +   S  N+    WP++   Y  + +EY   M ++  +L      +              E +G       +++N+YP CP P+ A+G+ AHTD + LT+L  +   GLQVF+++  W+  +  P  L+++IGD   ILSNGK  +V+HR  VN  ++R+S       PA D  + P+ +L     P  Y++  +K+Y   K
Sbjct:  111 KGVSGYGEPRISPFFEKKMWSEGF--TIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIAYLWGGPAGDVQIAPISKLTGPAEPSLYRSITWKEYLQIK 337          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.015e-23
Identity = 62/189 (32.80%), Postives = 99/189 (52.38%), Query Frame = -3
Query:  255 LQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPL 815
            LQ EV   + W + + +  +P +S +Y  WP+ P  +  V EEY+  +  +   L              L +A    D++  + +NYYP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +D    WI  + +P A ++++GD    LSNG++K   H+  VN + +R+S   F  P  D  V PL
Sbjct:  120 LQGEVV--QDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACV--DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATFQNPSPDATVYPL 304          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.437e-23
Identity = 65/220 (29.55%), Postives = 109/220 (49.55%), Query Frame = -3
Query:  171 EGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDD----ENP----PKYKAKKFKDYSYCKLNKL 800
            E  + W + + +  +P  + +Y  WP+ P  +R+V +EY++ +  +  KL              L  A    D++  + +N+YP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +D    WI  + +  A ++++GD    LSNG++K   H+  VN + +R+S   F  P  +  V PL     +    E P      Y+ K  KD    +L KL
Sbjct:  123 EAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACV--DMDQKVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNHSRLSIATFQNPAPEATVYPLKIREGEKAVLEGPITFAEMYRRKMSKDLELARLKKL 340          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.863e-23
Identity = 70/213 (32.86%), Postives = 100/213 (46.95%), Query Frame = -3
Query:  219 VQGYGTKLQKEVEGKKSWVDHL---FH-RVWPPSSINYRFWPNNPPSYRAVNEEYAKY---MREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 836
            V GY +        K  W + L   FH R   P   +Y F     P +  +   Y KY   M+E+   +               +E     D   +++ NYYPPCP P+  LG   H D +ALT+L+ ++V GL+V  D  W     +P A++I+IGD    LSNG+YK+ LHR  VN+ + R S   FL P  D VV P P     ++ P +
Sbjct:  136 VSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADY-FSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFA--DSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDF 345          
The following BLAST results are available for this feature:
BLAST of CX069872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
G3OX3_ARATH1.068e-2433.33Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
FL3H_MALDO1.822e-2429.86Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
FL3H_MATIN2.380e-2430.45Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_ARATH3.109e-2430.45Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FL3H_PETHY9.045e-2430.36Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
GAOX3_ARATH1.543e-2328.99Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
G3OX4_ARATH2.015e-2329.69Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
FL3H_DIACA2.015e-2332.80Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_VITVI3.437e-2329.55Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
GAOX2_ORYSJ5.863e-2332.86Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13D05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13D05-G9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069872 ID=CX069872; Name=CX069872; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTAAAATGAAAGGATTATTTATTATTGCTAACACCCGCGATT
ACATTTCAGAAACAAGATCGCAACAACAAACAAGCATCGCTAACGTACAG
TGACGAGATCAAACATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCA
TAATGAAAAATCTACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATC
CTTGAACTTCTTGGCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCT
GAGGAAGGGGACCCACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGC
CACGACATTCTCGTCTTGTCCTTGTTAACAGTGGTTCTATGCAGCACGGC
TTTGTACTTGCCATTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGA
TGAGAGCGTTCGGGATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAG
ACTTGCAGACCAGGAACTTCATTGGGCACAAGAACGGTGAGGGCGGAAAG
ATCAGTGTGGGCCACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCG
GATAGTAATTAATCTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCT
TCTTTCAAAACACCTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAA
CAACTTATCCACCACCTCCCTCATGTACTTTGCATACTCCTCATTCACCG
CTCGGTAAGAAGGAGGGTTGTTGGGCCAAAAGCGGTAGTTGATAGAAGAC
GGAGGCCAAACCCTGTGGAAGAGATGATCAACCCAAGATTTCTTTCCTTC
GACTTCTTTCTGTAACTTTGTGCCGTATCCTTGCACGTCTTTTGCAT
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