CX069872

Overview
NameCX069872
Unique NameCX069872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.863e-23
Identity = 70/213 (32.86%), Postives = 100/213 (46.95%), Query Frame = -3
Query:  219 VQGYGTKLQKEVEGKKSWVDHL---FH-RVWPPSSINYRFWPNNPPSYRAVNEEYAKY---MREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 836
            V GY +        K  W + L   FH R   P   +Y F     P +  +   Y KY   M+E+   +               +E     D   +++ NYYPPCP P+  LG   H D +ALT+L+ ++V GL+V  D  W     +P A++I+IGD    LSNG+YK+ LHR  VN+ + R S   FL P  D VV P P     ++ P +
Sbjct:  136 VSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADY-FSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFA--DSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDF 345          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23
Identity = 59/181 (32.60%), Postives = 99/181 (54.70%), Query Frame = -3
Query:  195 PPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFL-------EPPADTVVGPLPQLVDDENPPKYKAKKFKDY 716
            P   R +  +Y+ Y+R +   LF             L+E    + +  +L  +YYP CP+P+L  G   H+D   LT+L+ +++ GLQ+  +++WID  +IP AL+I+I D +++++N K+K+V HR   NK   R+S  V         E  +  + GP+ +L+ +ENPP YK    KD+
Sbjct:  201 PDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGL--ILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDF 379          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23
Identity = 59/184 (32.07%), Postives = 101/184 (54.89%), Query Frame = -3
Query:  195 PNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKD-KTRMSWPVFLEPPADTVVGPLPQLV----DDENPPKYKAKKFKDY 725
            P+    YR + +++A  + ++ ++L              LK+   G     +  K++ YPPCP PDL  G+ AHTD   + +L  ++ V GLQ+ KD  W+D   + +++++++GDQ+E+++NGKYK+V HR     D + RMS   F  P +D+V+ P P+L+    + E    Y    F+DY
Sbjct:  104 PDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDY 287          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.000e-22
Identity = 47/126 (37.30%), Postives = 77/126 (61.11%), Query Frame = -3
Query:  192 NYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEP---PADTVVGPLPQLVDDENPPKYKAKKFKDYS 560
            +YYPPCP+PDL LG+  H+D S LT+L+ + + GLQV  D  W+D   +P AL++++GD +++++N K+ +V HR   N    R+S   F          V GP+ +++ +ENPP Y+     +Y+
Sbjct:  221 HYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYA 346          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.306e-22
Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = -3
Query:  189 DDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSY 587
            ++ + ++++N+YPPC  PDL LG   H D S+LT+L  + V GLQVF D++W   +  P A +++IGD    LSNG +K+ LHR  VN++  R S   FL P  D VV P   +++     K K +K+ D+++
Sbjct:  219 EENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILE-----KMKTRKYPDFTW 346          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.706e-22
Identity = 65/220 (29.55%), Postives = 107/220 (48.64%), Query Frame = -3
Query:  171 EGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLP----QLVDDENP----PKYKAKKFKDYSYCKLNKL 800
            E  + W + + +  +P  + +Y  WP+ P  +R++ E Y+  +  +  KL              L +A    D++  + +NYYP CP+P+L LG+  HTD   +T+L+ ++V GLQ  +D    WI  + +  A ++++GD    LSNG++K   H+  VN + +RMS   F  P  +  V PL     +    E P      YK K  +D     L KL
Sbjct:  123 EAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACV--DMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRMSIATFQNPAPNATVYPLKIREGEKAVMEEPITFAEMYKRKMSRDIEMATLKKL 340          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.963e-22
Identity = 63/209 (30.14%), Postives = 108/209 (51.67%), Query Frame = -3
Query:  195 LQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDD-IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 815
            L++EVE    W    + R  P S++ Y   P+    YR   +++ K +  + + L              LK+   G     +  K++ YP CP+P++  G+ AHTD   + +L  ++ V GLQ+ KD  WID   + ++++I++GDQ+E+++NG+YK+++HR    K+  RMS   F  P +D  + P   L   E   +Y +  F DY
Sbjct:   80 LEREVEDV-DWESTFYLRHLPQSNL-YDI-PDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKET--EYPSFVFDDY 283          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.482e-22
Identity = 57/200 (28.50%), Postives = 97/200 (48.50%), Query Frame = -3
Query:  192 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQ--VFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYS 785
            W D L H   P        WP  P  YR V  +Y+  +R++  ++  Y                    I+ ML  NYYPPCP P   LG   H D + +T+L   ++PGLQ  + KD  WI  + IP A ++++G  +++++N K++  +HR   +  + R+S    + P     + P  +L++ +NPP YK   + +++
Sbjct:  128 WKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYFDNELS--QIQMMLT-NYYPPCPDPSSTLGSGGHYDGNLITLL-QQDLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIATLIGPDYSCTIEPAKELLNQDNPPLYKPYSYSEFA 323          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.482e-22
Identity = 69/210 (32.86%), Postives = 96/210 (45.71%), Query Frame = -3
Query:  219 GYGTKLQKEVEGKKSWVDHLFHRVWP--PSSINYRFWPNNPPSYRAVNEEYAKYMREV----VDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 830
            GY +        K  W + L  R  P  P+ +           +R + E YA+Y  E+    ++ +               +   G D I   +++NYYPPC RP   LG   H D ++LT+L  + V GLQV  + RW   +   +A +++IGD    LSNG+YK+ LHR  VN    R S   FL P  D VV P   LVD  NP  Y
Sbjct:  114 GYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSI---MRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAY 320          
BLAST of CX069872 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.482e-22
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = -3
Query:  255 WVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPL 785
            W + + +  +P ++ +Y  WP  P  +R+  E Y++ +  +  KL              L +A    D+E  + INYYP CP+PDL LGV  HTD   +T+L+ + V GLQ  +D    WI  + +  A ++++GD    LSNG+++   H+  VN   +R+S   F  P  + +V PL
Sbjct:  128 WREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACV--DMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQDMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNSTSSRLSIATFQNPAQNAIVYPL 304          
The following BLAST results are available for this feature:
BLAST of CX069872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GAOX2_ORYSI5.863e-2332.86Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
DV4H_CATRO7.657e-2332.60Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCO1_ARATH7.657e-2332.071-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCH1_ARATH1.000e-2237.301-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GAOX2_ARATH1.306e-2239.10Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
FL3H_PETCR1.706e-2229.55Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
ACCO1_BRAJU4.963e-2230.141-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
HY6H_HYONI6.482e-2228.50Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
GAO1B_WHEAT6.482e-2232.86Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
FNSI_PETCR6.482e-2231.84Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13D05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13D05-G9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069872 ID=CX069872; Name=CX069872; organism=Citrus sinensis; type=EST; length=847bp
CTTTTTTTTTAAAATGAAAGGATTATTTATTATTGCTAACACCCGCGATT
ACATTTCAGAAACAAGATCGCAACAACAAACAAGCATCGCTAACGTACAG
TGACGAGATCAAACATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCA
TAATGAAAAATCTACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATC
CTTGAACTTCTTGGCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCT
GAGGAAGGGGACCCACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGC
CACGACATTCTCGTCTTGTCCTTGTTAACAGTGGTTCTATGCAGCACGGC
TTTGTACTTGCCATTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGA
TGAGAGCGTTCGGGATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAG
ACTTGCAGACCAGGAACTTCATTGGGCACAAGAACGGTGAGGGCGGAAAG
ATCAGTGTGGGCCACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCG
GATAGTAATTAATCTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCT
TCTTTCAAAACACCTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAA
CAACTTATCCACCACCTCCCTCATGTACTTTGCATACTCCTCATTCACCG
CTCGGTAAGAAGGAGGGTTGTTGGGCCAAAAGCGGTAGTTGATAGAAGAC
GGAGGCCAAACCCTGTGGAAGAGATGATCAACCCAAGATTTCTTTCCTTC
GACTTCTTTCTGTAACTTTGTGCCGTATCCTTGCACGTCTTTTGCAT
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