CX069869

Overview
NameCX069869
Unique NameCX069869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9623 contig Csv1_Contig9623:337..1112. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069869 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.534e-24
Identity = 66/167 (39.52%), Postives = 98/167 (58.68%), Query Frame = 2
Query:  179 SLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGIC-VTAHTPLGGAVANTEWFGTVS--CLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYR 655
            +L  TW A+E     GLV+S+G+SN+     ++ L +  L Y   KPV NQ E HPYF +  L++         + A++PLG    N  W    S   L D +L  L +KY +T AQ VLR+ IQR   VIPK++  ER++ENF++FDF L+KE+M  I+++++  R
Sbjct:  145 NLCATWEALEACKDAGLVKSLGVSNFNRRQLEVILNKPGLKY---KPVTNQVECHPYFTQTKLLEVSASSMTSFIVAYSPLG-TCRNPLWVNVSSPPLLKDELLTSLGKKYNKTQAQIVLRFDIQRGLVVIPKSTTPERIKENFQIFDFSLTKEEMKDIEALNKNVR 307          
BLAST of CX069869 vs. ExPASy Swiss-Prot
Match: DTDH_MUCMU (4-dihydromethyl-trisporate dehydrogenase OS=Mucor mucedo GN=tdh PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.615e-24
Identity = 66/210 (31.43%), Postives = 112/210 (53.33%), Query Frame = 2
Query:   86 VHFPVATKHTGVGTTDSA---LDEDGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLG--GAVANTEWFGT-VSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQPARF-WGIDLF 694
            +HFPV  ++    T       + +   L+ + +  +   W  +E +V  GL R+IG++N++     D L Y+++KP V Q E HPY  ++ LVK+ ++ GI +TA++  G    V  TE   T  S L+   +K +A+K+  +  Q +LRW + R  AVIPK+    R++ N ++ D +L  ED   + S+    R N P  + +G+ LF
Sbjct:  112 IHFPVPLQYVDPATVYPPGWYVGDAKSLQFEQS-PIHECWAELEKIVDAGLARNIGVANFNCQAILDLLTYARIKPAVLQIELHPYLPQERLVKWVKEQGIQITAYSSFGPTSYVDLTESGKTYTSLLEHASVKSVADKHNVSTGQVLLRWALDREFAVIPKSVNAGRMKANLEILDIKLDAEDNKTLDSLKTNQRFNDPMTYGFGLPLF 320          
BLAST of CX069869 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.290e-23
Identity = 69/204 (33.82%), Postives = 108/204 (52.94%), Query Frame = 2
Query:   86 VHFPVATKHTGVGTTDSALDEDGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDI-----FLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVS--CLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQPARF 676
            +HFP+A +    G      DE G L  +T + +  TW AME     GL +SIG+SN++       L +  L Y   KPV NQ E H Y  +  ++ +C+   I + ++  LG +   T W    S   LDDPVL  +A+KYK+T A   LR+ +QR    + ++   +R++E  +VF+F+L+ EDM  +  ++R +R N    F
Sbjct:  116 IHFPMALQP---GDIFFPRDEHGKLLFET-VDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKY---KPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGSSRDKT-WVDQKSPVLLDDPVLCAIAKKYKQTPALVALRYQLQRGVVPLIRSFNAKRIKELTQVFEFQLASEDMKALDGLNRNFRYNNAKYF 311          
BLAST of CX069869 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.102e-23
Identity = 62/218 (28.44%), Postives = 113/218 (51.83%), Query Frame = 2
Query:    2 WNSD--HGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDEDGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRK 649
            W SD   G V+ A +++             VH+P        G+ D    ++   E+     +E  W  ME+   +GL R+IG+SN+        L+++ V+P  NQ E +P +Q+ +L + C++ G+ +  ++PLG     T W G+ + +D  VL  +A+   +T+AQ  LRW  ++   ++ KT    R++EN  +FD+EL++E+ D I  + ++
Sbjct:   89 WCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPATV---APGSYDFPFPKE---EMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMNPMWQQRTLREVCRREGVQLCGYSPLG--AKGTPW-GSAAVMDSGVLHDIAQTKGKTLAQICLRWMYEQGDVLLVKTYNENRMKENLDIFDWELTEEERDKISKLPQQ 297          
BLAST of CX069869 vs. ExPASy Swiss-Prot
Match: AK1CD_MESAU (Aldo-keto reductase family 1 member C13 OS=Mesocricetus auratus GN=AKR1C13 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.703e-23
Identity = 72/205 (35.12%), Postives = 109/205 (53.17%), Query Frame = 2
Query:   86 VHFPVATKHTGVGTTDSALDEDGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDI-----FLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVS--CLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQPARFW 679
            +H+PV  K    G  D  LDE G L +DT +    TW A+E     GLV+SIG+SN+++      L +  L Y   KPV NQ E H Y  +  L+ +C+   I + A   LG      EW    S   L+DPVL G A+   R+ A   LR+ +QR    + ++     ++EN +VF+F+LS EDM ++  +++ +R   PA+F+
Sbjct:  116 MHYPVPMK---AGDNDFPLDEQGKLLLDT-VDFCATWEALEKXXDAGLVKSIGVSNFNMRQLERILNKPGLKY---KPVCNQVECHVYNNQSKLLDYCKSKDIVLVAFGALG-TQRYKEWVDQDSPVLLNDPVLCGGAKXXXRSPALIALRYLVQRGVVPLAQSFYESEMKENLQVFEFQLSPEDMKILDGLNKNFR-YLPAQFF 311          
BLAST of CX069869 vs. ExPASy Swiss-Prot
Match: CRO_RANCA (Rho crystallin OS=Rana catesbeiana PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.532e-22
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 2
Query:   86 VHFPVATKHTGVGTTDSALDEDGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEW--FGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDR 646
            +H+PV+ K +G        D+D     D  + L  TW A+E     GLVRS+G+SN+     +  L +  L Y   KPV NQ E H Y  ++ L  +C+   I +  ++ LG    +  W        LDDP+L  +A KY RT A+  +R+ +Q+   V+ K+    R+++N  VF+FEL  EDM  ++S+DR
Sbjct:  117 MHWPVSLKPSGASDPS---DKDKPFIYDN-VDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKY---KPVCNQVECHVYLNQNKLHSYCKSKDIVLVTYSVLGSH-RDRNWVDLSLPVLLDDPILNKIAAKYNRTSAEVAMRFILQKGIVVLAKSFTPARIKQNLGVFEFELKPEDMKTLESLDR 302          
BLAST of CX069869 vs. ExPASy Swiss-Prot
Match: AK1CL_RAT (Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus GN=Akr1c21 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.532e-22
Identity = 75/197 (38.07%), Postives = 104/197 (52.79%), Query Frame = 2
Query:   86 VHFPVATKHTGVGTTDSALDEDGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVS--CLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYR 655
            +HFP+A K    G  +  +DE G L  DT + L  TW AME     GL +SIG+SN+     +  L +  L Y   KPV NQ E H Y  +  L+ FC+ +GI + A+  LG    N  W    S   L++PVL  +A+KY +T A   LR  +QR   V+  + K ER++EN K     LS EDM V+  ++R  R
Sbjct:  116 IHFPMALKP---GDENFPVDEHGKLLFDT-VDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEKILNKPGLKY---KPVCNQVECHLYLNQMKLLDFCKTNGIILVAYGVLGTQRYNG-WVDQNSPVLLNEPVLSSMAKKYNQTPALIALRHQLQRGIVVLNTSLKEERIKENMK-----LSPEDMKVLDDLNRNLR 299          
BLAST of CX069869 vs. ExPASy Swiss-Prot
Match: YER5_SCHPO (Uncharacterized oxidoreductase C2F3.05c OS=Schizosaccharomyces pombe GN=SPAC2F3.05c PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.307e-22
Identity = 57/158 (36.08%), Postives = 94/158 (59.49%), Query Frame = 2
Query:  191 TWHAMEDLVSMGLVRSIGISNYDIFLTRDCL-AYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTN 661
            +W A+E  V  G +R+IG+SN+     ++ L ++ K+ P VNQ E HP+  +  +V +C+  GI + A+ PL     + E FG    L       +A KY ++ AQ ++R+ +QR   V+PK+S   R++EN  VFDFE+SKEDM+ + ++D  Y ++
Sbjct:  120 SWKALEKGVEEGKLRAIGVSNFGPHHIQELLDSHPKIIPCVNQIELHPFCSQQKVVDYCESKGIQLAAYAPL----VHGEKFGNKQLL------AIASKYNKSEAQIMIRYCLQRGFIVLPKSSTPRRIKENGDVFDFEISKEDMEKLYNLDEDYHSD 267          
BLAST of CX069869 vs. ExPASy Swiss-Prot
Match: 6DCS_SOYBN (NAD(P)H-dependent 6'-deoxychalcone synthase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.307e-22
Identity = 60/222 (27.03%), Postives = 120/222 (54.05%), Query Frame = 2
Query:   11 DHGH-VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDEDGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQPAR 673
            +H H VL A + S             +H+P++++    G     ++ + +L  D    ++  W +ME+   +GL ++IG+SN+ +   ++ L+ + ++PVV+Q E +  +Q+  L +FC+++GI VTA +PL    +     G    +++ VLK +AE + +++AQ  LRW  ++    +PK+   ER+ +N  +FD+ L+++D   I  I +    + P +
Sbjct:   94 NHPHLVLPALRKSLKTLQLEYLDLYLIHWPLSSQP---GKFSFPIEVEDLLPFD----VKGVWESMEECQKLGLTKAIGVSNFSVKKLQNLLSVATIRPVVDQVEMNLAWQQKKLREFCKENGIIVTAFSPLRKGASR----GPNEVMENDVLKEIAEAHGKSIAQVSLRWLYEQGVTFVPKSYDKERMNQNLHIFDWALTEQDHHKISQISQSRLISGPTK 304          
BLAST of CX069869 vs. ExPASy Swiss-Prot
Match: CRO_RANTE (Rho crystallin OS=Rana temporaria PE=2 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 7.368e-22
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 2
Query:   86 VHFPVATKHTGVGTTDSALDEDGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEW--FGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDR 646
            +H+PV+ K +G        D+D     D  + L  TW A+E     GLVRS+G+SN+     +  L +  L Y   KPV NQ E H Y  ++ L  +C+   I +  ++ LG    +  W        LDDP+L  +A KY RT A+  +R+ +Q+   V+ K+    R+++N  VF+FEL  EDM  ++S+DR
Sbjct:  117 MHWPVSLKPSGASDPS---DKDKPFIYDN-VDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKY---KPVCNQVECHVYLNQNKLHSYCKSKDIVLVTYSVLGSH-RDRNWVDLSLPVLLDDPILNKVAAKYNRTSAEIAMRFILQKGIVVLAKSFTPARIKQNLGVFEFELKPEDMKSLESLDR 302          
The following BLAST results are available for this feature:
BLAST of CX069869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
AK1D1_RAT3.534e-2439.523-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
DTDH_MUCMU4.615e-2431.434-dihydromethyl-trisporate dehydrogenase OS=Mucor ... [more]
DIDH_RAT2.290e-2333.823-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
NADO2_ORYSJ5.102e-2328.44Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
AK1CD_MESAU8.703e-2335.12Aldo-keto reductase family 1 member C13 OS=Mesocri... [more]
CRO_RANCA2.532e-2234.02Rho crystallin OS=Rana catesbeiana PE=1 SV=2[more]
AK1CL_RAT2.532e-2238.07Aldo-keto reductase family 1 member C21 OS=Rattus ... [more]
YER5_SCHPO3.307e-2236.08Uncharacterized oxidoreductase C2F3.05c OS=Schizos... [more]
6DCS_SOYBN3.307e-2227.03NAD(P)H-dependent 6'-deoxychalcone synthase OS=Gly... [more]
CRO_RANTE7.368e-2234.02Rho crystallin OS=Rana temporaria PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13D03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13D03-G5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069869 ID=CX069869; Name=CX069869; organism=Citrus sinensis; type=EST; length=776bp
TTGGAATTCAGATCATGGACATGTTCTGGAGGCCTGTAAGGACAGTTTAA
AGAAGCTCCAACTGGATTATCTAGATCTCTACCTCGTCCATTTTCCTGTA
GCCACAAAACACACTGGCGTTGGTACAACTGATAGTGCATTAGATGAGGA
TGGTGTGCTGGAGATAGACACAACTATATCATTGGAAACAACCTGGCATG
CAATGGAGGATTTGGTTTCAATGGGTTTAGTTCGAAGCATTGGGATCAGC
AACTATGACATCTTTTTAACAAGAGACTGCTTAGCTTACTCCAAAGTGAA
GCCGGTGGTGAATCAGTTTGAAACTCACCCATACTTCCAACGTGATTCTC
TTGTCAAGTTCTGTCAGAAGCATGGGATATGTGTCACAGCTCATACTCCT
CTAGGAGGTGCCGTAGCCAACACTGAATGGTTCGGTACTGTCTCATGTTT
GGATGACCCCGTTTTGAAAGGTCTAGCTGAGAAATACAAGAGGACTGTGG
CCCAGACTGTTCTCAGGTGGGGCATCCAACGGAACACAGCTGTCATCCCG
AAGACGTCAAAGCTTGAGAGACTGGAAGAGAATTTCAAAGTTTTTGACTT
TGAGCTGAGCAAAGAAGACATGGATGTGATTAAGAGCATTGACAGAAAAT
ATCGAACCAACCAGCCTGCTAGGTTTTGGGGCATAGATCTGTTTGCTTAA
GTATGCTCATTGTTCTGGATAAGAATGTTTCTATGAGTTTAAAAAATAGG
TGATCAAACGTCCTTGATGTGTTTTA
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