CX069868

Overview
NameCX069868
Unique NameCX069868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069868 vs. ExPASy Swiss-Prot
Match: Y1918_MYCSJ (Uncharacterized oxidoreductase Mjls_1918 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1918 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.622e-15
Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = -2
Query:  184 TWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYR 648
            +W  +      G+ RSIG+ N++     + +  S   P +NQ E HP   +  L +    +GI   A+ PLG              LD   + G+A+ + +T AQ +LRW IQ    VI +++  +R+  N +VFDFEL+ ++M  +  +D   R
Sbjct:  128 SWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAYGPLGVG----------RLLDHAAVTGVAQAHDKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDEMATLNGLDEGTR 272          
BLAST of CX069868 vs. ExPASy Swiss-Prot
Match: Y1984_MYCSK (Uncharacterized oxidoreductase Mkms_1984 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1984 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.424e-15
Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = -2
Query:  184 TWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYR 648
            +W  +      G+ RSIG+ N++     + +  S   P +NQ E HP   +  L +    +GI   A+ PLG              LD   + G+A+ + +T AQ +LRW IQ    VI +++  +R+  N +VFDFEL+ ++M  +  +D   R
Sbjct:  128 SWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAYGPLGVG----------RLLDHAAVTGVAQAHGKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDEMATLNGLDEGTR 272          
BLAST of CX069868 vs. ExPASy Swiss-Prot
Match: Y1938_MYCSS (Uncharacterized oxidoreductase Mmcs_1938 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_1938 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.424e-15
Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = -2
Query:  184 TWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYR 648
            +W  +      G+ RSIG+ N++     + +  S   P +NQ E HP   +  L +    +GI   A+ PLG              LD   + G+A+ + +T AQ +LRW IQ    VI +++  +R+  N +VFDFEL+ ++M  +  +D   R
Sbjct:  128 SWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAYGPLGVG----------RLLDHAAVTGVAQAHGKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDEMATLNGLDEGTR 272          
BLAST of CX069868 vs. ExPASy Swiss-Prot
Match: ARA1_YEAST (D-arabinose dehydrogenase [NAD(P)+] heavy chain OS=Saccharomyces cerevisiae GN=ARA1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.841e-15
Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = -2
Query:  163 VRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQPARF 609
            VR+IG+SN+ I      +   +VKP VNQ ETHP+  +  L KFC  H I +TA++PLG   A          L  P++K LAEKY  T    ++ + I++ T VIP++    R+  + +     L+K+++  +     KY    P RF
Sbjct:  186 VRAIGVSNFSIEYLERLIKECRVKPTVNQVETHPHLPQMELRKFCFMHDILLTAYSPLGSHGAPN--------LKIPLVKKLAEKYNVTGNDLLISYHIRQGTIVIPRSLNPVRISSSIEF--ASLTKDELQELNDFGEKY----PVRF 320          
BLAST of CX069868 vs. ExPASy Swiss-Prot
Match: YBN4_SCHPO (Uncharacterized oxidoreductase C8E4.04 OS=Schizosaccharomyces pombe GN=SPBC8E4.04 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.301e-14
Identity = 59/188 (31.38%), Postives = 96/188 (51.06%), Query Frame = -2
Query:  199 VHFPVATKHTGVGTTDSALDEDGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVS-CLDDPVLKGLAEKYKR--TVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSI 753
            +H+P A      G  +   +E G L I   + +E TW AME+L+  G VR IGISN++       L  +KVKP ++Q E HPY  +   ++  +K  I V+A++PL  A  N  +   +S  ++   L  +A       T A   + W ++R T+V+PK+    R+  NF      L+ ++M+ I +I
Sbjct:  116 IHWPFALLS---GPEELPRNEKGEL-IYEDVPIEETWQAMEELLETGKVRYIGISNFNNEYLDRVLKIAKVKPTIHQMELHPYLPQTEYLEKHKKLQIHVSAYSPL--ANQNDAYNSDISKLIEHKTLVDIANARGEGITPANIAISWAVKRGTSVLPKSVNESRIVSNF--LYIPLTDKEMEAINNI 295          
BLAST of CX069868 vs. ExPASy Swiss-Prot
Match: DKGB_YERPE (2,5-diketo-D-gluconic acid reductase B OS=Yersinia pestis GN=dkgB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.699e-14
Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = -2
Query:  172 MGLVRSIGISNYDIFLTRDCLAYSKVKPVV-NQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQP 618
            +GL R IGISN+ I L +  +A    + +  NQ E  P  Q  ++V F +++GI VT++  L    A          L +PV+K +AE++  T AQ +L W +Q    VIP ++K   L  N       L+  DM +I ++DR  R   P
Sbjct:  120 LGLTRQIGISNFTIDLMKQAIAAVGAEEIATNQIELSPLLQNRNVVDFAKQNGIAVTSYMTLAYGKA----------LAEPVIKTIAEQHGATPAQVILSWAMQLGYGVIPSSTKAANLASNLLAQKLCLNAADMALIATLDRNERLVSP 259          
BLAST of CX069868 vs. ExPASy Swiss-Prot
Match: DKGB_SALTY (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhimurium GN=dkgB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.439e-13
Identity = 50/165 (30.30%), Postives = 76/165 (46.06%), Query Frame = -2
Query:  172 ISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVV-NQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQP 663
            +S+E    A+ +    GL R IGISN+ I L    +A      +  NQ E  PY Q   +V + + HGI +T++  L    A          L D V+  +A K+  T AQ +L W +    +VIP +++ E L  +    D  L  ED + I ++D   R   P
Sbjct:  105 VSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADNIATNQIELSPYLQNRKVVDWAKAHGIHITSYMTLAYGKA----------LKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTRRENLASSLLAQDLHLDAEDKNAIAALDCNDRLVSP 259          
BLAST of CX069868 vs. ExPASy Swiss-Prot
Match: DKGB_SALTI (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhi GN=dkgB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.439e-13
Identity = 50/165 (30.30%), Postives = 75/165 (45.45%), Query Frame = -2
Query:  172 ISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVV-NQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKYRTNQP 663
            +S+E    A+ +    GL R IGISN+ I L    +A      +  NQ E  PY Q   +V + + HGI +T++  L    A          L D V+  +A K+  T  Q +L W +    +VIP +++ E L  N    D  L  ED + I ++D   R   P
Sbjct:  105 VSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADHIATNQIELSPYLQNRKVVDWAKAHGIHITSYMTLAYGKA----------LKDEVIARIAVKHNATPVQVILAWAMGEGYSVIPSSTRRENLASNLLAQDLHLDAEDKNAIAALDCNDRLVSP 259          
BLAST of CX069868 vs. ExPASy Swiss-Prot
Match: YHH5_SCHPO (Uncharacterized oxidoreductase C28F2.05 OS=Schizosaccharomyces pombe GN=SPBC28F2.05c PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.879e-13
Identity = 46/154 (29.87%), Postives = 72/154 (46.75%), Query Frame = -2
Query:  187 TWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAHTPLGGAVANTEWFGTVSCLDDPVLKGLAEKYKRTVAQTVLRWGIQRNTAVIPKTSKLERLEENFKVFDFELSKEDMDVIKSIDRKY 648
            +W A+      G +  IG+SNY+I    + ++     P +NQ E   +  R + + +C  HGI V A +PL               L D  L  L+ KY +T A  +LR+ +Q+  + I K S    + EN K   F L   DMDV+ + D ++
Sbjct:  121 SWRALLQHQKEGRINKIGVSNYNIHHLEEIISLGLPLPAINQVEFSAFNNRPTFLSYCFNHGILVQAFSPLTRGYR----------LSDIRLLDLSLKYNKTPANILLRYCLQKGVSPIFKASSFVHIHENVKAEQFMLDPSDMDVMDTWDEEF 264          
The following BLAST results are available for this feature:
BLAST of CX069868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
Y1918_MYCSJ2.622e-1529.68Uncharacterized oxidoreductase Mjls_1918 OS=Mycoba... [more]
Y1984_MYCSK3.424e-1529.68Uncharacterized oxidoreductase Mkms_1984 OS=Mycoba... [more]
Y1938_MYCSS3.424e-1529.68Uncharacterized oxidoreductase Mmcs_1938 OS=Mycoba... [more]
ARA1_YEAST5.841e-1534.23D-arabinose dehydrogenase [NAD(P)+] heavy chain OS... [more]
YBN4_SCHPO1.301e-1431.38Uncharacterized oxidoreductase C8E4.04 OS=Schizosa... [more]
DKGB_YERPE1.699e-1433.332,5-diketo-D-gluconic acid reductase B OS=Yersinia... [more]
DKGB_SALTY1.439e-1330.302,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
DKGB_SALTI1.439e-1330.302,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
YHH5_SCHPO1.879e-1329.87Uncharacterized oxidoreductase C28F2.05 OS=Schizos... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13D03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13D03-G5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069868 ID=CX069868; Name=CX069868; organism=Citrus sinensis; type=EST; length=841bp
GGCCCCCCTTTTTTTTTTTTTAATGTAAGTCAGGAATGTCTTCGATAAAA
TGTTTTTAATACTAAAACACATCAAGGACGTTTGATCACCTATTTTTTAA
ACTCATAGAAACATTCTTATCCAGAACAATGAGCATACTTAAGCAAACAG
ATCTATGCCCCAAAACCTAGCAGGCTGGTTGGTTCGATATTTTCTGTCAA
TGCTCTTAATCACATCCATGTCTTCTTTGCTCAGCTCAAAGTCAAAAACT
TTGAAATTCTCTTCCAGTCTCTCAAGCTTTGACGTCTTCGGGATGACAGC
TGTGTTCCGTTGGATGCCCCACCTGAGAACAGTCTGGGCCACAGTCCTCT
TGTATTTCTCAGCTAGACCTTTCAAAACGGGGTCATCCAAACATGAGACA
GTACCGAACCATTCAGTGTTGGCTACGGCACCTCCTAGAGGAGTATGAGC
TGTGACACATATCCCATGCTTCTGACAGAACTTGACAAGAGAATCACGTT
GGAAGTATGGGTGAGTTTCAAACTGATTCACCACCGGCTTCACTTTGGAG
TAAGCTAAGCAGTCTCTTGTTAAAAAGATGTCATAGTTGCTGATCCCAAT
GCTTCGAACTAAACCCATTGAAACCAAATCCTCCATTGCATGCCAGGTTG
TTTCCAATGATATAGTTGTGTCTATCTCCAGCACACCATCCTCATCTAAT
GCACTATCAGTTGTACCAACGCCAGTGTGTTTTGTGGCTACAGGAAAATG
GACGAGGTAGAGATCTAGATAATCCAGTTGGAGCTTCTTTAAACTGTCCT
TACAGGCCTCCAGAACATGTCCATGATCTGAATTCCAACCT
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