CX069861

Overview
NameCX069861
Unique NameCX069861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.194e-24
Identity = 71/222 (31.98%), Postives = 106/222 (47.75%), Query Frame = 2
Query:    2 IAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKA-------------LDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            +AI E    PGGG W GG +F+ +V+      +L E  I Y ++D ++V+   A+  ++ M     +    +FN V  EDL++   R+ GVV NW         +  +DP  + AK  V   GH     A  V+ L   G+I  V G                +D  + E  +V  T+E+ PG+ V GM    + G PRMGP FG M++SG +AA L  + L
Sbjct:   51 VAIFEAKNEPGGGIWGGGMMFNELVLESELEWYLKEHHIKYKKEDEFIVVD--AVHFASAMLYNATKNGAYIFNNVFVEDLVMYNERISGVVINWMPTIKE---KLHVDPITVVAKFTVDGTGHP----ANLVRLLSKRGIINSVKGSSENLCSCGVVEYEFPMDAENGEKFVVENTKEIYPGLYVMGMAAVSVGGGPRMGPIFGGMIMSGLRAAELIEEEL 263          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.888e-24
Identity = 68/209 (32.54%), Postives = 107/209 (51.20%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + E+ +S GGG   G  LF  +V+  PA   L E+ I  ++ ++ V I  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    A   +++  +G++  +PG ++     AE   V  T  V PG+ V GM V E+ G PRMGP FG+M++SG+K A   +K L
Sbjct:   60 VFERRLSFGGGIGGGAMLFHKLVIESPADEVLKEMNIRLEKVEDGVYIVDSAEFMAKLAASAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---AGLHVDPVFISAKAVVDATGHDAEVVAVASRKIPELGIV--IPGERSAYSEMAEKLTVEQTGVVAPGLYVAGMSVTEVRGLPRMGPIFGSMVLSGKKVAEDIIKDL 262          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_METM7 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0597 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.422e-23
Identity = 74/213 (34.74%), Postives = 106/213 (49.77%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTST---IMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            ++E+ +S GGG W GG  F  +VV KPA   L E GI  DE D         LFT+    + +KL         K+   +  EDLI+K  ++ GVV     +         +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ L
Sbjct:   57 VLERHLSFGGGTWGGGMGFPNIVVEKPADEILREAGIKLDEVDG-----EDELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAGVVIQSYAIEK---AGLHIDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKL 259          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_METS5 (Putative thiazole biosynthetic enzyme OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2221 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.857e-23
Identity = 70/212 (33.02%), Postives = 107/212 (50.47%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARP---NVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + E+ +S GGG   G  LF  +V+  PA   L E+G+   + +  V +  ++ F    M+KL A       K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE   V  + EV PG+   GM V EI   PRMGP FGAM++SG+K A   +K+L
Sbjct:   56 VFERRLSFGGGIGGGAMLFHKIVIESPADEILREIGVKLQKFEEGVYVVDSSEF----MAKLAAATIDAGAKIIHGVTVDDVIFRENPLRVTGVAVEWTATQM---ASLHVDPLFISAKAVVDATGHDAEVISVASRKIPELGIV--IPGEKSAYSEIAEQLTVEQSGEVAPGLYAAGMAVTEIKAIPRMGPIFGAMLLSGKKVAEDIIKNL 258          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_METM6 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_1321 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.857e-23
Identity = 73/213 (34.27%), Postives = 106/213 (49.77%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTST---IMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            ++E+ +S GGG W GG  F  +VV KPA   L E GI  DE D         LFT+    + +KL         K+   +  EDLI+K  ++ GVV     +         +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ +
Sbjct:   57 VLERHLSFGGGTWGGGMGFPNIVVEKPADDILREAGIKLDEVDG-----EEELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAGVVIQSYAIEK---AGLHIDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKM 259          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_METM5 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0226 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.426e-23
Identity = 73/213 (34.27%), Postives = 106/213 (49.77%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTST---IMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            ++E+ +S GGG W GG  F  +VV KPA   L E GI  DE D         LFT+    + +KL         K+   +  EDLI+K  ++ GVV     +         +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ +
Sbjct:   57 VLERHLSFGGGTWGGGMGFPNIVVEKPADEILREAGIKLDEVDG-----EDELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAGVVIQSYAIEK---AGLHIDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKM 259          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_SULTO (Putative thiazole biosynthetic enzyme OS=Sulfolobus tokodaii GN=ST0361 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.138e-23
Identity = 65/209 (31.10%), Postives = 107/209 (51.20%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + E+ +S GGG   G  LF  +V+  PA   L E+ I  ++ +  V I  +A F + + +  +     K+ + V  +D+I +    +V GV   W    M       +DP  + AK VV + GHD    +   +++  + ++  +PG K+    +AE+  V  T  V PG+   GM V E+ G PRMGP FGAM++SG++ A + +K L
Sbjct:   61 VFERRLSFGGGIGGGAMLFHKIVIESPADEILKEMKIKLNKVEEGVYIVDSAEFMAKLAASAIDA-GAKIIHGVTVDDVIFRENPLKVVGVAVEWTATQM---AGLHVDPLFISAKAVVDATGHDAEVISVAARKIPELNIV--IPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKRVAEIIIKDL 263          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.138e-23
Identity = 67/209 (32.06%), Postives = 105/209 (50.24%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + E+ +S GGG   G  LF  +++ KPA   L E+ I   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+  TGM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   58 VFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNIRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYATGMAVTEVKGLPRMGPIFGAMVLSGKAVAGEITKDL 260          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_DESOH (Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.138e-23
Identity = 72/213 (33.80%), Postives = 109/213 (51.17%), Query Frame = 2
Query:    2 IAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYD--EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIE--EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            +A+ E+ +S GGG W G  LF+ +VV+K A   LD + I Y    +D Y      A+ T T  +   A+  V +FN V  ED++++  R+ G+V NW+ V M       +DP  M A  V+ + GH         K++      +  ++ G K++  + AE   +  TREV PG+ V GM      G PRMG  FG M++SG+K A   L+ L
Sbjct:   51 VALFERKLSIGGGMWGGAMLFNEIVVQKSALHVLDAMEIGYRLYAEDYYTADAVEAISTLTSQA---AKAGVAIFNCVTVEDVMIRPDRIVGLVLNWSPVEM---AGLHVDPLAMRASFVIDATGHATEVVHVVAKKVPGTLRTDSGKIEGEKSMWSDRAESLTLENTREVYPGLYVAGMAGNATFGGPRMGAIFGGMLLSGEKVAAEILERL 257          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 65/209 (31.10%), Postives = 104/209 (49.76%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   58 VFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
The following BLAST results are available for this feature:
BLAST of CX069861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
THI4_FERNB2.194e-2431.98Putative thiazole biosynthetic enzyme OS=Fervidoba... [more]
THI4_SULAC4.888e-2432.54Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METM71.422e-2334.74Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METS51.857e-2333.02Putative thiazole biosynthetic enzyme OS=Metallosp... [more]
THI4_METM61.857e-2334.27Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METM52.426e-2334.27Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_SULTO4.138e-2331.10Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULSO4.138e-2332.06Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_DESOH4.138e-2333.80Putative thiazole biosynthetic enzyme OS=Desulfoco... [more]
THI4_SULIY1.204e-2231.10Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13C09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13C09-E17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069861 ID=CX069861; Name=CX069861; organism=Citrus sinensis; type=EST; length=686bp
GATTGCTATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCG
GTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAAACCAGCCCACATCTTC
CTTGACGAGCTTGGCATCGACTACGATGAGCAAGACAACTATGTTGTGAT
CAAGCATGCAGCGCTGTTCACCTCCACTATAATGAGCAAGCTCCTGGCCC
GCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGCCGAGGACTTGATAGTC
AAAGGCGGCAGAGTTGGTGGTGTGGTGACCAACTGGGCGTTGGTGTCAAT
GAATCACGATACACAGTCTTGCATGGATCCCAATGTAATGGAAGCGAAGG
TGGTTGTGAGCTCTTGTGGCCATGATGGGCCTTTTGGGGCCACTGGAGTA
AAGAGGTTGAAGAGTATCGGAATGATTGAGGAAGTGCCTGGAATGAAGGC
ACTGGACATGAACTCTGCAGAAGATGCTATTGTGAGGCTGACCAGGGAGG
TTGTGCCTGGTATGATAGTTACCGGCATGGAAGTTGCCGAGATTGATGGT
GCTCCTCGAATGGGGCCAACATTTGGAGCAATGATGATATCGGGGCAGAA
GGCTGCGCATTTGGCGTTGAAGTCACTGGGCCAGCCGAATGCATTAGACG
GTACATATGTGGGAGGCGTTCACCCTGAGCTGATCT
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