CX069861

Overview
NameCX069861
Unique NameCX069861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:485..1170. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 65/209 (31.10%), Postives = 104/209 (49.76%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   58 VFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 65/209 (31.10%), Postives = 104/209 (49.76%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   58 VFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_SULIK (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1717 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 65/209 (31.10%), Postives = 104/209 (49.76%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   58 VFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_SULIA (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1786 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 65/209 (31.10%), Postives = 104/209 (49.76%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   58 VFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_META3 (Putative thiazole biosynthetic enzyme OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0798 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 63/209 (30.14%), Postives = 110/209 (52.63%), Query Frame = 2
Query:    2 IAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + I+E+ +S GGG W GG     + V+ PA   L E+GI  +E ++ + +  +    + + +  +     K+   +  ED+I+K G+V GVV N   ++        +DP  + AK V+ + GHD     T  ++ + +G++  +PG K+L  +  E+ +++ T+E+ PG+ V GM      G  RMG  FG M ISG+  A + L+ L
Sbjct:   58 VLILERHLSFGGGTWGGGMGCPYITVQSPADEILSEVGIKLEEGEDGLFVADSVEVPAKLGTGAIDA-GAKVLTGIVVEDVILKEGKVSGVVINSYAINK---AGLHIDPLTINAKYVIDATGHDASVACTLARKNEDLGLV--IPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGAVFGGMYISGKIVADMILEKL 260          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_METVS (Putative thiazole biosynthetic enzyme OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0663 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.572e-22
Identity = 72/215 (33.49%), Postives = 105/215 (48.84%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTST---IMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 634
            ++E+ +S GGG W GG  F  +VV KPA   L   GI     D         LFT+    + +KL         K+   +  EDLI+K  ++ GVV     +         +DP  + AK V+ S GHD    +T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A L L+ L +
Sbjct:   57 VLERHLSFGGGTWGGGMGFPNIVVEKPADEILRSAGIKLKSVDG-----EPELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKISGVVIQSYSIEK---AGLHVDPITISAKYVIDSTGHDASVVSTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLFVCGMTANAYHAGYRMGAIFGGMYLSGKKCAELILEKLNK 261          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_ARCFU (Putative thiazole biosynthetic enzyme OS=Archaeoglobus fulgidus GN=AF_0702 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22
Identity = 69/212 (32.55%), Postives = 109/212 (51.42%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARP---NVKLFNAVAAEDLIVKGGRVG--GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            ++E+ +S GGG   GG LF  +VV + A   LD+ GI Y E  N++V   A       M+KL A+      K+ + V+ ED+I +   +G  GV   W+ V ++      +DP  + ++ VV + GHD    +   ++   I +   V G ++     AE  IV  T ++V G+   GM VA +   PRMGP FG M++SG+K A +  + L
Sbjct:   58 VLERRLSFGGGIGGGGMLFHKVVVEREAKDILDDFGIRYTEHRNFLVADSAEF-----MAKLAAKAIDAGAKIIHGVSVEDVIFRDDPLGVRGVCIQWSAVEISG---LHVDPLFLRSRAVVDATGHDAEVISVAARK---IPLEVSVVGERSAYSEVAEREIVEKTGKIVKGLYAAGMAVAAVHNLPRMGPIFGGMLLSGKKVAEIVAEDL 258          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_SULIN (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1140 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 64/209 (30.62%), Postives = 103/209 (49.28%), Query Frame = 2
Query:    8 IIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  + G K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   58 VFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IAGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_PYRAR (Putative thiazole biosynthetic enzyme OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=Pars_1498 PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21
Identity = 66/214 (30.84%), Postives = 107/214 (50.00%), Query Frame = 2
Query:    2 IAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQ-DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 634
            + + E+  S GGG   GG +  ++VV++ A   L +  + Y    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+      +DP    AK V+ + GHD    +   +++  +G+  ++PG K+     +E  +V  T +V PG+ VTGM VA + G PRMGP FG MM+SG+K A +  K L +
Sbjct:   48 VLVFERRFSFGGGIGPGGNMLPSIVVQEEALPILRDFKVRYQPAGDGLYTVDPAELIAKLAAGAIDA--GAKIILGVHVDDVIFRGDPPRVAGLLWIWTPIQMSG---MHVDPLYTMAKAVIDATGHDAEVISVAARKVPELGI--QLPGEKSAWSEVSEKLVVEYTGKVAPGLYVTGMAVAAVHGLPRMGPIFGGMMLSGKKIAEIVAKDLAE 254          
BLAST of CX069861 vs. ExPASy Swiss-Prot
Match: THI4_METJA (Putative thiazole biosynthetic enzyme OS=Methanocaldococcus jannaschii GN=MJ0601 PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20
Identity = 69/210 (32.86%), Postives = 104/210 (49.52%), Query Frame = 2
Query:    2 IAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDY-DEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 628
            + ++E+ ++ GGG W GG  F  +VV +PA   L E+GI   D  D Y V     +     ++ + A    K+   +  EDLI++   V GVV N   +         +DP  + +KVVV + GH+       VK+ K   +  +VPG K++     E+A++R TREV P + V GM      G  RMG  FG M +SG+  A L  + L
Sbjct:   58 VVVLERHLAFGGGTWGGGMGFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAKLAVAAMDA--GAKILTGIVVEDLILREDGVAGVVINSYAIER---AGLHIDPLTIRSKVVVDATGHEASIVNILVKKNK---LEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYRMGAIFGGMYLSGKLCAELITEKL 259          
The following BLAST results are available for this feature:
BLAST of CX069861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
THI4_SULIM1.204e-2231.10Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIL1.204e-2231.10Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIK1.204e-2231.10Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIA1.204e-2231.10Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_META31.204e-2230.14Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METVS1.572e-2233.49Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_ARCFU4.575e-2232.55Putative thiazole biosynthetic enzyme OS=Archaeogl... [more]
THI4_SULIN1.019e-2130.62Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_PYRAR1.739e-2130.84Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_METJA1.127e-2032.86Putative thiazole biosynthetic enzyme OS=Methanoca... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13C09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13C09-E17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069861 ID=CX069861; Name=CX069861; organism=Citrus sinensis; type=EST; length=686bp
GATTGCTATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCG
GTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAAACCAGCCCACATCTTC
CTTGACGAGCTTGGCATCGACTACGATGAGCAAGACAACTATGTTGTGAT
CAAGCATGCAGCGCTGTTCACCTCCACTATAATGAGCAAGCTCCTGGCCC
GCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGCCGAGGACTTGATAGTC
AAAGGCGGCAGAGTTGGTGGTGTGGTGACCAACTGGGCGTTGGTGTCAAT
GAATCACGATACACAGTCTTGCATGGATCCCAATGTAATGGAAGCGAAGG
TGGTTGTGAGCTCTTGTGGCCATGATGGGCCTTTTGGGGCCACTGGAGTA
AAGAGGTTGAAGAGTATCGGAATGATTGAGGAAGTGCCTGGAATGAAGGC
ACTGGACATGAACTCTGCAGAAGATGCTATTGTGAGGCTGACCAGGGAGG
TTGTGCCTGGTATGATAGTTACCGGCATGGAAGTTGCCGAGATTGATGGT
GCTCCTCGAATGGGGCCAACATTTGGAGCAATGATGATATCGGGGCAGAA
GGCTGCGCATTTGGCGTTGAAGTCACTGGGCCAGCCGAATGCATTAGACG
GTACATATGTGGGAGGCGTTCACCCTGAGCTGATCT
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