CX069859

Overview
NameCX069859
Unique NameCX069859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9923 contig Csv1_Contig9923:297..1089. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069859 vs. ExPASy Swiss-Prot
Match: OMT9_DICDI (O-methyltransferase 9 OS=Dictyostelium discoideum GN=omt9 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 43/148 (29.05%), Postives = 75/148 (50.68%), Query Frame = 3
Query:  360 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAP-----SIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQL 788
            F     +VD+GG+ G  +  +L+ +P I  GINFDL  V+  +      S P +THI G+ F+S+P +D   MK++L  W   +C  I++   K++    K+   E ++     + ++  +  E  I ++       K RT  E+K+L
Sbjct:  190 FSQYDTVVDIGGNHGLLIGNLLEIYPTIKHGINFDLDVVINSSDQTLRYSHPRLTHIPGNFFESVPESDCYIMKFILHDWPTQDCVKILKTISKSMKPNAKIHLFEIII-----DPRKGYSKYETYIDILMFQMVNAKERTLDEWKEL 332          
BLAST of CX069859 vs. ExPASy Swiss-Prot
Match: OMT11_DICDI (Probable inactive O-methyltransferase 11 OS=Dictyostelium discoideum GN=omt11 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 49/183 (26.78%), Postives = 92/183 (50.27%), Query Frame = 3
Query:  258 SYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDG---FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVA---EAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQL 788
            S Y ++ E N + +   +   + + T +L    G       + +VD+GGS G  +  +L ++P +  GINFD   V+    E    P + H+ GD FKS+P AD   MK +L  ++D++C  +++   K++ +  K+I  + +L  DS++       L+    ++ +    GK R+  E+ +L
Sbjct:  132 SDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNV-NGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIIL--DSSKYLNFDTYLD----ILMMETLDGKQRSLSEWIKL 307          
The following BLAST results are available for this feature:
BLAST of CX069859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
OMT9_DICDI5.477e-1229.05O-methyltransferase 9 OS=Dictyostelium discoideum ... [more]
OMT11_DICDI2.718e-1126.78Probable inactive O-methyltransferase 11 OS=Dictyo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13C08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13C08-E15-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069859 ID=CX069859; Name=CX069859; organism=Citrus sinensis; type=EST; length=793bp
AGAACTTGCAACGTATCCTCCGCTTGCTCACCAGCTACGGCGTGTTCTCG
GAGCATCGCGAGTTTGGAGGCGAAAGGAAGTACAGCCTCACCGAGATCGG
GAAATCCCTCGTTACTGATGCCGAGGGTCTATCGTACGCGCCCTACGTGC
TCCAGCATCACCAGGACGCGCTTATGAGCGCGTGGCCTTTGGTGCACGAG
GCCGTTCTGGACCCAACTATTGAGCCATTTGTGAAAGTCCATGGCGAGCC
GGCATATAGTTATTATGGGAAGAAGCCTGAAATGAACGGCTTGATGCGAA
AAGCCATGTCGGGAGTGTCCGTGCCGTTCATGACGTCCGTTTTGGACGGT
TACGATGGGTTCAAAGGTGTGAAGCGATTGGTTGATGTGGGTGGGAGTGC
AGGTGATTGCCTGAGGATGATATTACAGAAACATCCTTTTATATGTGAAG
GGATCAATTTTGATTTGCCTGAGGTTGTTGCCGAAGCTCCAAGTATCCCT
GGAGTGACCCATATTGGTGGGGACATGTTTAAGTCCATTCCTGCCGCTGA
TGCTATCTTTATGAAGTGGGTTTTAACTACATGGACTGACGATGAATGCA
AGCTGATAATGGAGAACTGTTACAAGGCTCTTCCGGCAGGAGGAAAACTG
ATTGCTTGTGAGCCCGTGCTGCCTGATGATTCAAACGAGAGTCAGAGGAC
GCGTGCTCTCTTAGAAGGGGACATTTTTGTAATGACCATCTACAGGGCCA
AAGGTAAACACAGGACTGAACAAGAGTTTAAGCAACTTGGTCT
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