CX069858

Overview
NameCX069858
Unique NameCX069858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX069858_ssr32 microsatellite CX069858_ssr32:32..43. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig4313 contig Csv1_Contig4313:1..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.472e-37
Identity = 78/183 (42.62%), Postives = 112/183 (61.20%), Query Frame = -2
Query:  305 SVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIP-AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 850
            SV     +LD Y GF     +VDVGG  G  +  ++ +HP I  GIN+DLP V++EAP  PGV H+GGDMF S+P   DAI MKW+L  W+D+ C  +++NCY ALP  GK++  E VLP+ S+ + R + +   D+ +M  +   GK R E+EF++L  +AGF   +A Y+      +EF K
Sbjct:  188 SVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHI-RGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDM-IMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.511e-37
Identity = 77/178 (43.26%), Postives = 109/178 (61.24%), Query Frame = -2
Query:  305 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 838
            M  + + Y GF+ +  +VDVGG  G  L MI+ K+P I +GINFDLP V+ +AP  PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D  +M  +   GK RTE+EF+ L + AGF   +     +   ++EF K
Sbjct:  193 MKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSI-KGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDA-IMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.542e-37
Identity = 82/181 (45.30%), Postives = 115/181 (63.54%), Query Frame = -2
Query:  305 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 838
            M  +LD Y+GF  VK LVDVGG+ G  + MI+ KH  I +GIN+DLP V+A+APS PGV H+GG+MF+SIP ADAIFMKWVL  W+D+ C  I+  CY++L  GGK+I  E   PV+P+D+ ES    +L   D   + ++   GK R++++F+ L    GF  +      Y   ++E  K
Sbjct:  189 MKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHI-KGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSL---DCHTL-VHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.126e-36
Identity = 74/178 (41.57%), Postives = 110/178 (61.80%), Query Frame = -2
Query:  305 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 838
            M  +L+ Y+GF+G+  +VDVGG  G    MI+ K+P I   INFDLP V+ +AP+  GV H+GGDMF  +P  DAIF+KW+   W+D+ C  +++NCY ALP  GK+I  E +LP   + S  T+ ++  D  +M  Y   GK RTE+EF+ L +++GF   +     +   ++EF K
Sbjct:  191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSI-NAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDA-LMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.378e-35
Identity = 70/150 (46.67%), Postives = 102/150 (68.00%), Query Frame = -2
Query:  401 SVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRT 850
            S   M  +L+ Y+GF+G+K +VDVGG  G  L MI+ K+P I +GINFDLP V+ +APS PGV H+GGDMF +IP  DA+FMKW+   W+D+ C  +++NCY ALP  G++I  E +LP   ++S  T+ ++  D  ++T + + GK RT
Sbjct:  166 STIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHF-SGGKERT 313          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.077e-32
Identity = 74/171 (43.27%), Postives = 97/171 (56.73%), Query Frame = -2
Query:  305 YDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 817
            Y GF  +K LVDVGG  G  L  I+ KHP I  GINF+LP V+ +AP  PGV H+ GDMF+ +P A  I +KWVL  W DD    I++NC+KALP  G +I  E VLP     +  +   L  D+ +M +    GK RT  EF  L  +AGF   + F +     ++EF K
Sbjct:  210 YKGFDNLKELVDVGGGIGTSLSNIVAKHPHI-RGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMAL-NPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.577e-31
Identity = 65/159 (40.88%), Postives = 103/159 (64.78%), Query Frame = -2
Query:  362 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGF 838
            M  +L+ Y GF+G+  LVDVGG +G  L +I+ K+P I +GINFDLP+V+  AP + G+ H+GGDMF S+P  DA+ +K V   W+D++C   + NC+KAL   GK+I  E +LP++ N S+ ++  L   +  +      G+ RTE+++++L   +GF
Sbjct:  197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLI-KGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESK--LVSTLDNLMFITVGGRERTEKQYEKLSKLSGF 352          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.338e-22
Identity = 62/169 (36.69%), Postives = 100/169 (59.17%), Query Frame = -2
Query:  314 DGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPA-GGKLIACEPVLPDDS-NESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLE 814
            D F+G+  LVDVGG  G  ++ I    P I +   FDLP V+A +  +P +  IGGDMFKS+P+A AI +K +L  W D++   I++ C  A+P  GGK+I  +  L ++S +E   TR +L+ D+ V T     GK RT++ ++++  SAGF   +  ++    +++E
Sbjct:  184 DMFQGIDSLVDVGGGNGTTVKAISDAFPHI-KCTLFDLPHVIANSYDLPNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEESDHELSSTRLILDIDMLVNT----GGKERTKEVWEKIVKSAGFSGCKIRHIAAIQSVIE 347          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22
Identity = 59/168 (35.12%), Postives = 98/168 (58.33%), Query Frame = -2
Query:  314 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALP---AGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLE 808
            F G++ +VDVGG  G   ++I +  P + + I FD P+VV        +T++GGDMF SIP ADA+ +K++L  WTD +C  I++ C +A+      GK+   + V+ +  +E+Q T+  L  D+ +  +    GK R E+E+K+L + AGF H +   +  F +L+E
Sbjct:  186 FDGLESIVDVGGGTGTTAKIICETFPKL-KCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQVTQIKLLMDVNMACL---NGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIE 349          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.639e-22
Identity = 59/168 (35.12%), Postives = 98/168 (58.33%), Query Frame = -2
Query:  314 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALP---AGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLE 808
            F G++ +VDVGG  G   ++I +  P + + I FD P+VV        +T++GGDMF SIP ADA+ +K++L  WTD +C  I++ C +A+      GK+   + V+ +  +E+Q T+  L  D+ +  +    GK R E+E+K+L + AGF H +   +  F +L+E
Sbjct:  186 FDGLESIVDVGGGTGTTAKIICETFPKL-KCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVINEKKDENQVTQIKLLMDVNMACL---NGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIE 349          
The following BLAST results are available for this feature:
BLAST of CX069858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
OMT1_ORYSJ1.472e-3742.62Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_CLABR2.511e-3743.26Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
IMT1_MESCR9.542e-3745.30Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
IEMT_CLABR2.126e-3641.57(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_EUCGL1.378e-3546.67Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
SMT_COPJA7.077e-3243.27(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA1.577e-3140.88Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
4OMT_COPJA1.338e-2236.693'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
7OMT6_MEDSA5.083e-2235.12Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]
7OMT9_MEDSA6.639e-2235.12Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13C08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13C08-E15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069858 ID=CX069858; Name=CX069858; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTAGTAGGAAATTAAATTTACTAAAAAGAAAGAAAGCAAACGA
CAAAGGAAAAAGAAATACATATCTATGAGATATGAGTTCAATGGAGTGAG
CTCAATATACAAAATACATGTCTATGAAATATGAGCTCAATAATTTATGT
TAATGATAAATCGTTTCTTTTTTTTTTTTGGTAGGCAGCTAGCGCTAACC
GCCTACTCAACATTTATAATTCATAGCAAGTTATTCCATCCTAGGCAACC
ACAGTCCATCACAAATATTCCCCAAGTCTTTTAAGGATCCAGAAACTAAA
ATTACTTTTGGAACTCAAGAAGAGTGTGAAAATAATCGACATAAAAAGCT
CTCAAGTGTGGAAAACCAGCAGAGAGACCAAGTTGCTTAAACTCTTGTTC
AGTCCTGTGTTTACCTTTGGCCCTGTAGATGGTCATTACAAAAATGTCCC
CTTCTAAGAGAGCACGCGTCCTCTGACTCTCGTTTGAATCATCAGGCAGC
ACGGGCTCACAAGCAATCAGTTTTCCTCCTGCCGGAAGAGCCTTGTAACA
GTTCTCCATTATCAGCTTGCATTCATCGTCAGTCCATGTAGTTAAAACCC
ACTTCATAAAGATAGCATCAGCGGCAGGAATGGACTTAAACATGTCCCCA
CCAATATGGGTCACTCCAGGGATACTTGGAGCTTCGGCAACAACCTCAGG
CAAATCAAAATTGATCCCTTCACATATAAAAGGATGTTTCTGTAATATCA
TCCTCAGGCAATCACCTGCACTCCCACCCACATCAACCAATCGCTTCACA
CCTTTGAACCCATCGTAACCGTCCAAAACGGACGTCATGAACGGCACGGA
CACTCCC
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