CX069858

Overview
NameCX069858
Unique NameCX069858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX069858_ssr32 microsatellite CX069858_ssr32:32..43. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig4313 contig Csv1_Contig4313:1..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.132e-21
Identity = 59/168 (35.12%), Postives = 97/168 (57.74%), Query Frame = -2
Query:  314 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALP---AGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLE 808
            F G++ +VDVGG  G   ++I +  P + + I FD P+VV        +T++GGDMF SIP ADA+ +K++L  WTD +C  I++ C +A+      GK+   + V+    +E+Q T+  L  D+ +  +    GK R E+E+K+L + AGF H +   +  F +L+E
Sbjct:  186 FDGLESIVDVGGGTGTTAKIICETFPKL-KCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACL---NGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIE 349          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21
Identity = 63/150 (42.00%), Postives = 87/150 (58.00%), Query Frame = -2
Query:  362 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPA-GGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGF 808
            F G+  LVDVGG  G  +R I    P I   + +DLP V+A++P    V  + GDMFK IP ADAI MK +L  W D EC  I++ C +A+P  GGK+I  + VL +  +E   T+  L  D+ +M      GK RTE+E+K+L   AG+
Sbjct:  182 FNGITTLVDVGGGTGTAVRNIANAFPHIKCTV-YDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVL-NVQSEHPYTKMRLTLDLDMM--LNTGGKERTEEEWKKLIHDAGY 327          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.136e-20
Identity = 61/168 (36.31%), Postives = 91/168 (54.17%), Query Frame = -2
Query:  314 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALP---AGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLE 808
            F+G+  LVDVGG  G   + I +  P +   +  DL  VVA+AP+   V  I GDMF+SIP ADA+ +K VL  W  D+C  I++NC KA+P   AGGK+I    V+    ++ +        D+++M I    G  R EQE+ ++   AG+   R   V    +++E
Sbjct:  198 FQGISSLVDVGGGIGAAAQAISKAFPHVKCSV-LDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDVYIMFI---NGMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIE 361          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.816e-18
Identity = 54/147 (36.73%), Postives = 88/147 (59.86%), Query Frame = -2
Query:  362 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGF 802
            G++ LVDVGG  G   + I++  P +   +  DLP VVA   S   +++IGGDMF+SIP+ADAI +K+++  W D+E   I++ C  A+  GGK+I  + V+  + +  +     L  D+ +M+ + A  K RT  E+++L  +AGF
Sbjct:  194 GIRTLVDVGGGNGTMAKAIVEAVPTMKCTV-LDLPHVVAGLESTDKLSYIGGDMFQSIPSADAILLKFIIHDWDDEEGLKILKRCKDAVGIGGKVIIIDVVVGVNHDVDEVLEDQLHFDMAMMSYFNA--KERTMNEWEKLISAAGF 337          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.692e-17
Identity = 57/149 (38.26%), Postives = 85/149 (57.05%), Query Frame = -2
Query:  362 KGVKRLVDVGGSAGDCLRMILQKHPFI-CEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGF 805
            +G++ LVDVGG  G   + I++  P I C  I  DLP VVA   S   + +IGGDMF+SIP+ADAI +K ++  W D E   I++ C  A+  GGK+I  + V+  + +  +     L  D+ +M  + A  K RT  E+++L   AGF
Sbjct:  194 EGIRTLVDVGGGNGTMAKAIVEAMPTIKCTVI--DLPHVVAGLESTDNLNYIGGDMFQSIPSADAILLKSIIHDWDDVEGLKILKKCKDAVVMGGKVIIIDVVVGVNHDIDEVLEDQLHFDMAMMCYFNA--KERTMSEWEKLIYDAGF 338          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: OMT12_DICDI (O-methyltransferase 12 OS=Dictyostelium discoideum GN=omt12 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.871e-16
Identity = 53/151 (35.10%), Postives = 82/151 (54.30%), Query Frame = -2
Query:  362 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI------PGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGF 796
            K +VD+GGS G  +  +L+ +P I  GINFDL  ++  + S       P + H+ GD F S+P AD   +K++L  W+D++C  I+ N +K+L   GKL   + VL    + S  T+  +  DI +M  + A  K R+  E+ QL    GF
Sbjct:  175 KTVVDIGGSHGFLIGKLLESNPNI-HGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVL----DPSNYTKEAVFKDILMMQYFDA--KERSINEWHQLFEKCGF 318          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.691e-14
Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = -2
Query:  362 VPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPA-GGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGF 847
            +P + S L   +   GV  +VDVGG++G   + I+   P +   +  DL  V+      P + ++ GDMF SIP ADAI +K  L  + DD+C  I+    +ALP+ GGK+I  E ++ D  N    T A L   + +M +    GK RT++E++ L   A F
Sbjct:  175 LPALVSGLMKENVLDGVASIVDVGGNSGVVAKGIVDAFPHVKCSV-MDLNHVIERVIKNPKLDYVAGDMFTSIPNADAILLKSTLHNYEDDDCIKILNIAKEALPSTGGKVILVE-IVVDTENLPLFTSARLSMGMDMMLM---SGKERTKKEWEDLLRKANF 332          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: OMT4_DICDI (O-methyltransferase 4 OS=Dictyostelium discoideum GN=omt4 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.639e-12
Identity = 47/152 (30.92%), Postives = 78/152 (51.32%), Query Frame = -2
Query:  362 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI---PGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGF 808
            F   K++VD+GGS G  +  IL+K+P    GINFDL      A  +   P + H  G+ F+S+P  D   +K +L  W D++C  I+E   K++  GGK+I  + ++    N     +  L  D+ +   + ++ K  T ++F  +   AGF
Sbjct:  174 FSPFKKIVDIGGSHGRFVCEILEKYPN-SHGINFDLESFFNGAGELIKNPRLEHKSGNFFESVPEGDCYILKRILHDWKDEDCIKILETIGKSILPGGKVIIFDCII----NPKNYNKGHLYLDVMMFHFFGSEEK--TIKQFSNISDKAGF 318          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: OMT9_DICDI (O-methyltransferase 9 OS=Dictyostelium discoideum GN=omt9 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12
Identity = 45/154 (29.22%), Postives = 77/154 (50.00%), Query Frame = -2
Query:  362 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAP-----SIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGF 808
            F     +VD+GG+ G  +  +L+ +P I  GINFDL  V+  +      S P +THI G+ F+S+P +D   MK++L  W   +C  I++   K++    K+   E ++     + ++  +  E  I ++       K RT  E+K+L   A F
Sbjct:  190 FSQYDTVVDIGGNHGLLIGNLLEIYPTIKHGINFDLDVVINSSDQTLRYSHPRLTHIPGNFFESVPESDCYIMKFILHDWPTQDCVKILKTISKSMKPNAKIHLFEIII-----DPRKGYSKYETYIDILMFQMVNAKERTLDEWKELFELADF 338          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: OMT11_DICDI (Probable inactive O-methyltransferase 11 OS=Dictyostelium discoideum GN=omt11 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.273e-11
Identity = 44/146 (30.14%), Postives = 79/146 (54.11%), Query Frame = -2
Query:  362 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVA---EAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGF 790
            +VD+GGS G  +  +L ++P +  GINFD   V+    E    P + H+ GD FKS+P AD   MK +L  ++D++C  +++   K++ +  K+I  + +L  DS++       L+    ++ +    GK R+  E+ +L   +GF
Sbjct:  175 VVDIGGSHGYLIGSLLDRYPNV-NGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIIL--DSSKYLNFDTYLD----ILMMETLDGKQRSLSEWIKLFEMSGF 313          
The following BLAST results are available for this feature:
BLAST of CX069858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
7OMT8_MEDSA1.132e-2135.12Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
6OMT_COPJA7.340e-2142.00(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
ZRP4_MAIZE2.136e-2036.31O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
CVMT1_OCIBA5.816e-1836.73Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
EOMT1_OCIBA1.692e-1738.26Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
OMT12_DICDI1.871e-1635.10O-methyltransferase 12 OS=Dictyostelium discoideum... [more]
COOMT_COPJA8.691e-1434.36Columbamine O-methyltransferase OS=Coptis japonica... [more]
OMT4_DICDI1.639e-1230.92O-methyltransferase 4 OS=Dictyostelium discoideum ... [more]
OMT9_DICDI4.769e-1229.22O-methyltransferase 9 OS=Dictyostelium discoideum ... [more]
OMT11_DICDI5.273e-1130.14Probable inactive O-methyltransferase 11 OS=Dictyo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_13C08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13C08-E15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069858 ID=CX069858; Name=CX069858; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTAGTAGGAAATTAAATTTACTAAAAAGAAAGAAAGCAAACGA
CAAAGGAAAAAGAAATACATATCTATGAGATATGAGTTCAATGGAGTGAG
CTCAATATACAAAATACATGTCTATGAAATATGAGCTCAATAATTTATGT
TAATGATAAATCGTTTCTTTTTTTTTTTTGGTAGGCAGCTAGCGCTAACC
GCCTACTCAACATTTATAATTCATAGCAAGTTATTCCATCCTAGGCAACC
ACAGTCCATCACAAATATTCCCCAAGTCTTTTAAGGATCCAGAAACTAAA
ATTACTTTTGGAACTCAAGAAGAGTGTGAAAATAATCGACATAAAAAGCT
CTCAAGTGTGGAAAACCAGCAGAGAGACCAAGTTGCTTAAACTCTTGTTC
AGTCCTGTGTTTACCTTTGGCCCTGTAGATGGTCATTACAAAAATGTCCC
CTTCTAAGAGAGCACGCGTCCTCTGACTCTCGTTTGAATCATCAGGCAGC
ACGGGCTCACAAGCAATCAGTTTTCCTCCTGCCGGAAGAGCCTTGTAACA
GTTCTCCATTATCAGCTTGCATTCATCGTCAGTCCATGTAGTTAAAACCC
ACTTCATAAAGATAGCATCAGCGGCAGGAATGGACTTAAACATGTCCCCA
CCAATATGGGTCACTCCAGGGATACTTGGAGCTTCGGCAACAACCTCAGG
CAAATCAAAATTGATCCCTTCACATATAAAAGGATGTTTCTGTAATATCA
TCCTCAGGCAATCACCTGCACTCCCACCCACATCAACCAATCGCTTCACA
CCTTTGAACCCATCGTAACCGTCCAAAACGGACGTCATGAACGGCACGGA
CACTCCC
back to top